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IMGVR_UViG_3300025362_000743-3300025362-Ga0208647_100032310

Arc-Vir

IMGVR_UViG_3300025362_000743-3300025362-Ga0208647_100032310

Quality

96.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 13-150_226-325
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5yh1A01 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.62 48.0 4.51e-01 78.6% 87.6%
2zxrA02 3.90.1640.30 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › 0.51 38.0 4.04e-01 76.5% 91.3%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4994623 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.64 49.0 4.70e-01 78.2% 93.6%
5008472 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.63 48.0 4.67e-01 77.3% 91.5%
5047186 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.63 49.0 4.72e-01 79.8% 94.3%
4970595 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.63 47.0 4.64e-01 77.3% 93.3%
4964991 2006.1.2.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.62 47.0 4.51e-01 77.3% 89.8%
5000617 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.61 47.0 4.59e-01 79.0% 94.6%
4027968 2006.1.2.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.61 46.0 4.17e-01 78.2% 91.5%
4928568 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.61 46.0 4.54e-01 78.2% 94.1%
5003534 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.60 46.0 4.59e-01 79.0% 91.2%
5057459 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.60 47.0 4.69e-01 79.8% 94.2%
4945820 2006.1.2.8 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH_CID 0.60 46.0 4.51e-01 79.0% 92.9%
5022409 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.60 46.0 4.61e-01 79.8% 92.7%
4941978 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.59 45.0 4.58e-01 78.2% 88.1%
4975614 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.59 46.0 4.50e-01 79.8% 90.6%
5066833 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.59 45.0 4.52e-01 79.0% 94.7%
4980521 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.59 46.0 4.63e-01 79.8% 93.6%
5062849 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.58 44.0 4.49e-01 76.9% 93.0%
4998274 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.58 43.0 4.47e-01 75.2% 93.6%
4962919 2006.1.2.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.57 40.0 4.18e-01 71.0% 84.4%
5029884 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.57 43.0 4.49e-01 76.9% 94.1%
4974628 2006.1.2.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.57 40.0 4.38e-01 71.0% 87.7%
5024281 2006.1.2.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.56 42.0 4.51e-01 78.2% 95.2%
4943162 2006.1.2.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.54 38.0 3.97e-01 71.4% 80.0%
4971695 2006.1.2.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.52 36.0 3.99e-01 70.2% 95.3%
D2 medium residues 151-225
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3k1rB00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.67 39.0 4.01e-01 98.7% 59.5%
2gxaE01 1.10.10.510 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain 0.56 46.0 4.68e-01 100.0% 94.5%
1orsC00 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.55 47.0 3.89e-01 93.3% 91.7%
3mvpA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 40.0 3.21e-01 86.7% 70.5%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4015729 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.60 44.0 3.73e-01 88.0% 46.4%
4028395 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.52 47.0 4.20e-01 100.0% 90.5%