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IMGVR_UViG_3300025371_000001-3300025371-Ga0209224_100000186
Arc-VirIMGVR_UViG_3300025371_000001-3300025371-Ga0209224_100000186
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 404-475
Domain cluster:
rep: NC_022915.1__YP_008853790.1__X532_gp05__00005__D164-234
D2
medium
residues 11-138
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3eqnA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.65 | 60.0 | 4.22e-01 | 100.0% | 35.7% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.57 | 46.0 | 4.12e-01 | 86.7% | 67.0% |
| 8fefH01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 44.0 | 3.41e-01 | 93.0% | 65.0% |
| 6hxqB01 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.50 | 44.0 | 4.04e-01 | 97.7% | 75.4% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1954234 | 207.2.1.31 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Gp49_Pectate_lyase_like | 0.75 | 45.0 | 5.14e-01 | 89.1% | 79.2% |
| 1285029 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.74 | 53.0 | 3.39e-01 | 100.0% | 15.9% |
| 1714451 | 207.2.1.31 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Gp49_Pectate_lyase_like | 0.64 | 50.0 | 5.38e-01 | 89.1% | 95.5% |
| 3714749 | 207.2.1.56 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › DGF-1_N | 0.57 | 50.0 | 3.35e-01 | 93.8% | 43.5% |
| 4012052 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.55 | 49.0 | 3.61e-01 | 99.2% | 54.3% |
D3
medium
residues 139-225
Domain cluster:
rep: NC_021798.1__YP_008241547.1__Phi17-2_gp052__00052__D16-91
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x3hA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.86 | 79.0 | 4.82e-01 | 100.0% | 17.9% |
| 7chuA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.85 | 79.0 | 5.08e-01 | 100.0% | 25.8% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.84 | 79.0 | 5.64e-01 | 100.0% | 49.6% |
| 3vsvA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 76.0 | 4.60e-01 | 100.0% | 24.3% |
| 1hg8A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 76.0 | 4.92e-01 | 100.0% | 37.2% |
| 7b7aA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 77.0 | 4.84e-01 | 100.0% | 30.9% |
| 1k5cA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 76.0 | 4.94e-01 | 100.0% | 35.7% |
| 7o79A01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.81 | 75.0 | 4.74e-01 | 100.0% | 23.8% |
| 5z9tA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.79 | 72.0 | 4.43e-01 | 100.0% | 21.3% |
| 8tmsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.76 | 70.0 | 4.80e-01 | 100.0% | 42.9% |
| 1k8fA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.71 | 51.0 | 4.24e-01 | 100.0% | 42.7% |
| 3b4nA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 64.0 | 4.67e-01 | 100.0% | 49.1% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.69 | 51.0 | 4.89e-01 | 97.7% | 69.1% |
| 2xt2B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.67 | 52.0 | 4.02e-01 | 96.6% | 37.1% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.67 | 46.0 | 3.64e-01 | 100.0% | 32.6% |
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 58.0 | 4.03e-01 | 100.0% | 38.4% |
| 4w8qA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.64 | 57.0 | 4.20e-01 | 100.0% | 49.6% |
| 3ljyA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.59 | 53.0 | 3.84e-01 | 100.0% | 44.8% |
| 3petA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.57 | 51.0 | 3.81e-01 | 100.0% | 39.4% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.57 | 51.0 | 4.21e-01 | 100.0% | 81.6% |
| 1pyoC00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 43.0 | 3.59e-01 | 81.6% | 78.3% |
| 3sipC00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 42.0 | 3.56e-01 | 80.5% | 80.3% |
| 2bm5B00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.56 | 50.0 | 3.97e-01 | 100.0% | 48.9% |
| 1wwlB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.55 | 48.0 | 3.36e-01 | 100.0% | 38.8% |
| 3bf0C03 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.53 | 45.0 | 3.77e-01 | 100.0% | 79.6% |
| 3nb2A01 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.53 | 47.0 | 3.74e-01 | 100.0% | 54.8% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5006606 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.91 | 75.0 | 5.39e-01 | 100.0% | 34.1% |
| 4944588 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.90 | 76.0 | 5.71e-01 | 100.0% | 41.1% |
| 4944456 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.89 | 81.0 | 5.83e-01 | 100.0% | 38.6% |
| 5060892 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.89 | 75.0 | 4.94e-01 | 100.0% | 24.4% |
| 4981077 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.89 | 74.0 | 5.09e-01 | 100.0% | 29.2% |
| 5047056 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.88 | 76.0 | 5.47e-01 | 100.0% | 35.9% |
| 4969618 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.88 | 74.0 | 5.30e-01 | 100.0% | 34.2% |
| 4969790 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.88 | 76.0 | 4.48e-01 | 100.0% | 13.6% |
| 5034020 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.88 | 75.0 | 5.18e-01 | 100.0% | 30.6% |
| 4970160 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.88 | 73.0 | 4.58e-01 | 100.0% | 19.5% |
| 5049754 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.87 | 75.0 | 4.99e-01 | 100.0% | 26.3% |
| 4969388 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.86 | 80.0 | 5.11e-01 | 100.0% | 24.4% |
| 5050988 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.86 | 73.0 | 4.99e-01 | 100.0% | 28.9% |
| 4969196 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.85 | 74.0 | 4.71e-01 | 100.0% | 21.6% |
| 4968215 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.84 | 73.0 | 5.03e-01 | 98.9% | 30.2% |
| 3668060 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.84 | 78.0 | 5.50e-01 | 100.0% | 47.6% |
| 1121177 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.84 | 79.0 | 5.64e-01 | 100.0% | 49.6% |
| 4981294 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.84 | 74.0 | 5.70e-01 | 100.0% | 46.3% |
| 5040115 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.83 | 74.0 | 5.43e-01 | 100.0% | 40.0% |
| 3649226 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.82 | 76.0 | 4.79e-01 | 100.0% | 24.9% |
| 3348918 | 207.2.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase | 0.81 | 63.0 | 4.68e-01 | 97.7% | 33.6% |
| 5017766 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.81 | 77.0 | 4.67e-01 | 100.0% | 18.5% |
| 7216 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.81 | 76.0 | 4.94e-01 | 100.0% | 35.7% |
| 5046701 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.81 | 76.0 | 4.56e-01 | 100.0% | 19.8% |
| 3586654 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.81 | 75.0 | 4.29e-01 | 100.0% | 18.2% |
| 3252580 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.80 | 70.0 | 4.56e-01 | 100.0% | 23.4% |
| 4940415 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.79 | 75.0 | 4.98e-01 | 100.0% | 45.1% |
| 4980388 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.79 | 75.0 | 4.53e-01 | 100.0% | 19.8% |
| 5034080 | 207.2.2.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › beta-helix domain of fiber adhesin | 0.79 | 61.0 | 5.57e-01 | 89.7% | 63.6% |
| 4969453 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.79 | 75.0 | 4.71e-01 | 100.0% | 25.8% |
| 3809768 | 207.2.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase | 0.77 | 71.0 | 4.74e-01 | 100.0% | 29.0% |
| 3302230 | 207.2.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase | 0.76 | 70.0 | 4.76e-01 | 100.0% | 33.2% |
| 3275349 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.76 | 70.0 | 4.43e-01 | 100.0% | 26.3% |
| 3422718 | 207.2.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28,Pectate_lyase_3 | 0.75 | 69.0 | 4.36e-01 | 100.0% | 38.8% |
| 3264291 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.75 | 64.0 | 4.45e-01 | 100.0% | 29.5% |
| 3335252 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.75 | 69.0 | 5.22e-01 | 100.0% | 56.4% |
| 3307012 | 207.2.2.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › beta-helix domain of fiber adhesin › Glyco_hydro_28 | 0.74 | 70.0 | 5.54e-01 | 100.0% | 85.6% |
| 3313243 | 207.2.1.4 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectinesterase | 0.74 | 66.0 | 4.55e-01 | 96.6% | 33.7% |
| 4030537 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.71 | 53.0 | 3.50e-01 | 100.0% | 18.9% |
| 4027019 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.70 | 48.0 | 4.01e-01 | 95.4% | 42.1% |
| 3256108 | 207.2.1.43 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Chlam_PMP | 0.70 | 61.0 | 4.26e-01 | 95.4% | 32.6% |
| 3260502 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.70 | 63.0 | 4.33e-01 | 100.0% | 36.3% |
| 3926071 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.69 | 51.0 | 4.25e-01 | 97.7% | 44.4% |
| 4968345 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.68 | 53.0 | 4.08e-01 | 100.0% | 37.4% |
| 3812365 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.67 | 46.0 | 4.36e-01 | 100.0% | 59.0% |
| 3481562 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.66 | 58.0 | 3.92e-01 | 100.0% | 30.0% |
| 4856486 | 207.9.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › LD_SV2 | 0.63 | 46.0 | 4.27e-01 | 100.0% | 61.3% |
| 4634184 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.62 | 55.0 | 3.82e-01 | 100.0% | 35.3% |
| 4976134 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.62 | 54.0 | 3.74e-01 | 100.0% | 41.6% |
| 4333063 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.61 | 54.0 | 3.68e-01 | 100.0% | 37.5% |
| 4012012 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.60 | 53.0 | 5.14e-01 | 100.0% | 86.0% |
| 3248661 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.60 | 55.0 | 4.07e-01 | 100.0% | 41.4% |
| 3546698 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.60 | 53.0 | 4.37e-01 | 100.0% | 59.4% |
| 3937180 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.59 | 54.0 | 4.30e-01 | 100.0% | 50.9% |
| 3983450 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.59 | 54.0 | 4.90e-01 | 100.0% | 76.5% |
| 1176419 | 207.9.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide | 0.57 | 50.0 | 4.82e-01 | 96.6% | 89.8% |
| 3266008 | 207.4.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C | 0.57 | 50.0 | 3.85e-01 | 100.0% | 43.9% |
D4
medium
residues 226-392
Domain cluster:
rep: MW865292.1__QZI86165.1__PODOV061v2_0021__00021__D403-523
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ogoX02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 69.0 | 5.23e-01 | 97.0% | 47.7% |
| 6kqsA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 71.0 | 5.15e-01 | 100.0% | 62.6% |
| 3gq8A01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.75 | 71.0 | 4.99e-01 | 100.0% | 41.6% |
| 1vblA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 70.0 | 5.09e-01 | 100.0% | 41.1% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 71.0 | 4.83e-01 | 100.0% | 35.8% |
| 4mxnB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.74 | 70.0 | 6.23e-01 | 100.0% | 74.8% |
| 3eqnA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 68.0 | 5.21e-01 | 100.0% | 66.9% |
| 1dbgA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 68.0 | 4.73e-01 | 100.0% | 34.1% |
| 2vjiA02 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 69.0 | 4.94e-01 | 100.0% | 41.3% |
| 1rmgA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.73 | 69.0 | 4.98e-01 | 100.0% | 48.1% |
| 7b7aA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 69.0 | 5.13e-01 | 100.0% | 50.9% |
| 4c2lA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 69.0 | 5.16e-01 | 100.0% | 51.6% |
| 3vsvA01 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 69.0 | 4.72e-01 | 100.0% | 68.0% |
| 4hwvB00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.72 | 68.0 | 4.76e-01 | 100.0% | 41.5% |
| 1bheA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.71 | 68.0 | 5.06e-01 | 100.0% | 52.4% |
| 4nk6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.71 | 67.0 | 4.85e-01 | 100.0% | 43.9% |
| 3zscA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.71 | 66.0 | 5.17e-01 | 100.0% | 50.2% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.70 | 41.0 | 5.25e-01 | 98.2% | 99.0% |
| 1clwA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.70 | 66.0 | 4.49e-01 | 100.0% | 34.3% |
| 1idjA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.70 | 66.0 | 5.02e-01 | 100.0% | 52.4% |
| 1ee6A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 60.0 | 5.70e-01 | 100.0% | 77.7% |
| 1pxzA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 66.0 | 5.04e-01 | 100.0% | 53.5% |
| 1k4zA00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.69 | 52.0 | 5.41e-01 | 100.0% | 82.8% |
| 3vmvA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 66.0 | 5.14e-01 | 100.0% | 55.2% |
| 2b0rB00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.69 | 52.0 | 5.42e-01 | 98.8% | 82.9% |
| 4oj5C04 | 2.160.20.130 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 53.0 | 5.09e-01 | 100.0% | 72.4% |
| 3n6zA01 | 2.160.20.110 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.68 | 63.0 | 5.36e-01 | 100.0% | 70.9% |
| 3riqA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.67 | 63.0 | 4.29e-01 | 100.0% | 36.0% |
| 3grhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 62.0 | 4.59e-01 | 100.0% | 53.9% |
| 1dabA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.66 | 62.0 | 4.23e-01 | 100.0% | 38.8% |
| 4pmhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.65 | 61.0 | 4.66e-01 | 100.0% | 57.4% |
| 1gq8A00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.65 | 61.0 | 4.83e-01 | 100.0% | 59.4% |
| 3bh7B01 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.55 | 52.0 | 4.96e-01 | 100.0% | 94.3% |
| 1ea0A04 | 2.160.20.60 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Glutamate synthase, alpha subunit, C-terminal domain | 0.50 | 46.0 | 3.93e-01 | 100.0% | 63.9% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5047057 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.85 | 65.0 | 5.10e-01 | 100.0% | 41.9% |
| 5040394 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.83 | 62.0 | 5.77e-01 | 100.0% | 63.6% |
| 4942767 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.80 | 65.0 | 4.90e-01 | 98.8% | 39.2% |
| 3335697 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.77 | 66.0 | 5.15e-01 | 100.0% | 46.6% |
| 5003179 | 207.2.1.121 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Disaggr_assoc | 0.76 | 73.0 | 5.29e-01 | 100.0% | 49.4% |
| 4012012 | 207.4.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like | 0.76 | 46.0 | 5.76e-01 | 91.6% | 100.0% |
| 4856486 | 207.9.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › LD_SV2 | 0.76 | 47.0 | 5.70e-01 | 93.4% | 93.7% |
| 5034346 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.76 | 72.0 | 5.52e-01 | 100.0% | 53.9% |
| 4944456 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.75 | 69.0 | 6.22e-01 | 100.0% | 73.5% |
| 3686362 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.75 | 71.0 | 6.04e-01 | 100.0% | 91.0% |
| 5020648 | 207.2.1.121 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Disaggr_assoc | 0.75 | 71.0 | 4.99e-01 | 100.0% | 41.9% |
| 364252 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.75 | 71.0 | 4.99e-01 | 100.0% | 41.7% |
| 4968922 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.74 | 64.0 | 4.57e-01 | 100.0% | 35.2% |
| None | — | 0.74 | 69.0 | 5.05e-01 | 100.0% | 40.9% | |
| 1714446 | 207.2.1.66 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › WcaM | 0.74 | 70.0 | 4.91e-01 | 100.0% | 38.7% |
| 4972671 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.74 | 64.0 | 4.92e-01 | 100.0% | 44.4% |
| 3715374 | 207.14.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › DGF-1_beta-sheet | 0.74 | 35.0 | 4.38e-01 | 78.4% | 72.4% |
| 4969954 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 62.0 | 4.02e-01 | 100.0% | 23.2% |
| 5017250 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.73 | 66.0 | 4.91e-01 | 100.0% | 41.3% |
| 4944455 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.73 | 65.0 | 5.40e-01 | 100.0% | 57.0% |
| 5027419 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.73 | 70.0 | 4.59e-01 | 100.0% | 28.6% |
| 5033010 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.73 | 65.0 | 4.85e-01 | 100.0% | 41.3% |
| 4211588 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 70.0 | 4.88e-01 | 100.0% | 54.6% |
| 4944594 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.73 | 65.0 | 4.66e-01 | 100.0% | 36.0% |
| 3195366 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.73 | 70.0 | 5.12e-01 | 100.0% | 71.3% |
| 4932813 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.73 | 70.0 | 5.03e-01 | 100.0% | 50.4% |
| 5020689 | 207.2.1.20 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_3 | 0.73 | 67.0 | 5.44e-01 | 100.0% | 56.1% |
| 4940084 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.72 | 64.0 | 5.99e-01 | 100.0% | 78.5% |
| 3244547 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.72 | 48.0 | 4.13e-01 | 99.4% | 43.5% |
| 3492291 | 207.4.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › C-CAP/cofactor C-like › C-CAP/cofactor C-like › CAP_C | 0.72 | 53.0 | 5.41e-01 | 98.8% | 77.3% |
| 3252135 | 207.2.1.70 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix | 0.72 | 69.0 | 4.81e-01 | 100.0% | 42.2% |
| 4969230 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.72 | 68.0 | 5.23e-01 | 100.0% | 68.1% |
| 5034020 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.72 | 64.0 | 5.45e-01 | 100.0% | 61.2% |
| 5018668 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.71 | 62.0 | 4.76e-01 | 100.0% | 44.8% |
| 7215 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.71 | 68.0 | 5.06e-01 | 100.0% | 52.4% |
| 4944592 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.71 | 64.0 | 4.98e-01 | 100.0% | 47.6% |
| 4167706 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.71 | 68.0 | 4.93e-01 | 100.0% | 44.9% |
| 4010919 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.71 | 66.0 | 5.26e-01 | 100.0% | 52.4% |
| 4049654 | 207.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Glyco_hydro_28 | 0.70 | 66.0 | 5.01e-01 | 100.0% | 54.0% |
| 4945679 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.69 | 66.0 | 5.51e-01 | 100.0% | 62.2% |
| 3586654 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.69 | 65.0 | 4.16e-01 | 100.0% | 27.1% |
| 5040116 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.69 | 66.0 | 4.79e-01 | 100.0% | 41.0% |
| 151440 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.69 | 66.0 | 5.14e-01 | 100.0% | 55.2% |
| 5060473 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.69 | 64.0 | 4.68e-01 | 100.0% | 39.5% |
| 5044981 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.68 | 65.0 | 4.89e-01 | 100.0% | 53.5% |
| 3714397 | 207.2.1.52 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.68 | 63.0 | 4.01e-01 | 100.0% | 42.5% |
| 4290646 | 207.2.1.70 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD, Beta_helix | 0.68 | 65.0 | 4.54e-01 | 100.0% | 36.1% |
| 3277453 | 207.2.1.73 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › PF29740 | 0.68 | 62.0 | 5.58e-01 | 100.0% | 72.4% |
| 3925156 | 207.6.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C | 0.68 | 62.0 | 4.49e-01 | 100.0% | 37.5% |
| 5018874 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.67 | 64.0 | 4.65e-01 | 100.0% | 41.7% |
| 4973391 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.67 | 64.0 | 4.90e-01 | 100.0% | 55.6% |
| 3634350 | 207.9.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats | 0.67 | 47.0 | 4.73e-01 | 100.0% | 71.4% |
| 3680585 | 207.2.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Pectate_lyase_4 | 0.65 | 60.0 | 5.23e-01 | 100.0% | 68.5% |
| 4235162 | 207.2.1.114 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › VID | 0.64 | 59.0 | 4.36e-01 | 100.0% | 41.4% |
| 3273919 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.61 | 55.0 | 4.47e-01 | 100.0% | 53.3% |
| 3264625 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.57 | 42.0 | 3.99e-01 | 100.0% | 65.3% |