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IMGVR_UViG_3300025393_000036-3300025393-Ga0208041_10052709
Arc-VirIMGVR_UViG_3300025393_000036-3300025393-Ga0208041_10052709
Identity
- Kingdom:
- archaea
Quality
81.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-108
Domain cluster:
rep: IMGVR_UViG_3300029825_000420-3300029825-Ga0134835_100419512__D2-101
D2
medium
residues 172-239
Domain cluster:
rep: IMGVR_UViG_3300006225_000028-3300006225-Ga0082206_10214711__D1-63
D3
medium
residues 245-365
Domain cluster:
rep: MH834603.1__AYN57327.1__PBI_BRIDGETTE_61__00061__D383-477
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08706.17 best | D5_N | 43.1 | 7.50e-11 | 76.9% | 60.5% |
D4
medium
residues 372-438
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08706.17 best | D5_N | 47.8 | 2.70e-12 | 76.1% | 34.0% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yn9B00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 43.0 | 3.32e-01 | 91.0% | 91.1% |
| 1wruA03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.50 | 37.0 | 3.96e-01 | 100.0% | 92.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3954608 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.96 | 90.0 | 5.77e-01 | 100.0% | 25.4% |
| 4973289 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.95 | 87.0 | 5.59e-01 | 100.0% | 24.5% |
| 5022020 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.92 | 86.0 | 5.54e-01 | 100.0% | 25.7% |
| 5081314 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.92 | 83.0 | 5.40e-01 | 100.0% | 25.0% |
| 5035042 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.91 | 85.0 | 5.42e-01 | 100.0% | 25.8% |
| 5029777 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.89 | 81.0 | 5.26e-01 | 100.0% | 25.5% |
| 3945876 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.85 | 77.0 | 5.07e-01 | 100.0% | 27.9% |
| 4171727 | 3265.1.1.0 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA | 0.58 | 34.0 | 3.40e-01 | 95.5% | 55.7% |
| 4083026 | 6020.1.1.1 ↗ | a+b two layers › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › Beta domain of DivIB/FtsQ › FtsQ_DivIB_C | 0.52 | 39.0 | 3.26e-01 | 83.6% | 73.6% |
| 4882021 | 5073.1.1.5 ↗ | alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_N | 0.51 | 37.0 | 3.12e-01 | 77.6% | 64.8% |