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IMGVR_UViG_3300025393_000055-3300025393-Ga0208041_10005189
Arc-VirIMGVR_UViG_3300025393_000055-3300025393-Ga0208041_10005189
Identity
- Kingdom:
- archaea
Quality
76.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-53
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.72 | 61.0 | 5.45e-01 | 100.0% | 88.1% |
| 1zu4A01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.69 | 58.0 | 4.82e-01 | 100.0% | 57.5% |
| 2mgwA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.69 | 54.0 | 5.25e-01 | 100.0% | 78.8% |
| 2bnkA00 | 1.10.8.600 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Phage phi29 replication organiser protein p16.7-like | 0.67 | 54.0 | 4.97e-01 | 100.0% | 71.9% |
| 5mq1A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.63 | 55.0 | 4.17e-01 | 100.0% | 63.0% |
| 1gjsA00 | 1.10.8.40 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Albumin-binding domain | 0.62 | 49.0 | 4.48e-01 | 100.0% | 64.6% |
| 2nyvA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.62 | 51.0 | 4.64e-01 | 100.0% | 68.8% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.55 | 47.0 | 3.30e-01 | 95.6% | 60.6% |
| 3cnhB02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 42.0 | 3.88e-01 | 95.6% | 69.1% |
| 4n4gA01 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.54 | 43.0 | 3.38e-01 | 95.6% | 55.0% |
| 3ecqA07 | 6.10.140.660 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 42.0 | 4.27e-01 | 97.8% | 97.8% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.51 | 43.0 | 4.33e-01 | 100.0% | 95.7% |
| 1nbwA04 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 38.0 | 2.86e-01 | 88.9% | 81.8% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1544881 | 632.2.1.4 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › GA-like | 0.67 | 54.0 | 5.07e-01 | 100.0% | 73.2% |
| 4934139 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.64 | 51.0 | 4.72e-01 | 91.1% | 68.3% |
| 5054797 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.62 | 53.0 | 4.91e-01 | 100.0% | 80.0% |
| 3480618 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.57 | 45.0 | 4.35e-01 | 86.7% | 90.0% |
| 5079106 | 7573.1.1.1 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran | 0.56 | 46.0 | 3.09e-01 | 95.6% | 62.3% |
| 3948038 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.56 | 40.0 | 2.60e-01 | 80.0% | 97.6% |
| 3795168 | 2007.1.6.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › ELFV_dehydrog_N | 0.55 | 43.0 | 2.84e-01 | 97.8% | 23.5% |
| 3470203 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.53 | 46.0 | 4.34e-01 | 100.0% | 87.3% |
| 4586835 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.52 | 45.0 | 4.04e-01 | 100.0% | 73.8% |
| 4213222 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.52 | 44.0 | 4.01e-01 | 100.0% | 75.0% |
| 3694221 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.52 | 44.0 | 4.07e-01 | 100.0% | 80.0% |
| 4203696 | 2004.1.1.53 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Adenylsucc_synt | 0.51 | 43.0 | 2.53e-01 | 100.0% | 30.3% |
| 3798210 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 43.0 | 4.22e-01 | 100.0% | 96.0% |
| 3993019 | 101.1.1.1 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain | 0.51 | 38.0 | 3.55e-01 | 91.1% | 65.0% |
| 4028002 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.50 | 40.0 | 3.81e-01 | 93.3% | 76.4% |