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IMGVR_UViG_3300025393_000069-3300025393-Ga0208041_10052469
Arc-VirIMGVR_UViG_3300025393_000069-3300025393-Ga0208041_10052469
Identity
- Kingdom:
- archaea
Quality
86.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-69
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b3tA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.67 | 45.0 | 3.85e-01 | 76.5% | 42.9% |
| 6opmD01 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.60 | 49.0 | 3.24e-01 | 96.1% | 47.5% |
| 2mbgA01 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.53 | 44.0 | 2.97e-01 | 94.1% | 45.7% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.52 | 41.0 | 2.79e-01 | 100.0% | 47.9% |
| 3jvoA00 | 1.10.3230.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › Phage gp6-like head-tail connector protein | 0.51 | 36.0 | 3.06e-01 | 78.4% | 68.8% |
| 3i2fA02 | 1.10.3020.10 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) | 0.51 | 39.0 | 3.29e-01 | 88.2% | 75.8% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4071300 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.93 | 82.0 | 5.81e-01 | 100.0% | 35.6% |
| 3942380 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.91 | 82.0 | 5.52e-01 | 100.0% | 29.8% |
| 5054951 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.91 | 82.0 | 5.92e-01 | 100.0% | 38.5% |
| 4934303 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.91 | 79.0 | 6.75e-01 | 100.0% | 61.5% |
| 5080069 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.90 | 77.0 | 5.73e-01 | 100.0% | 40.0% |
| 4961948 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.88 | 81.0 | 6.01e-01 | 100.0% | 45.0% |
| 5072041 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.87 | 76.0 | 5.59e-01 | 100.0% | 38.5% |
| 3197151 | 101.1.8.10 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3435 | 0.87 | 79.0 | 5.51e-01 | 100.0% | 48.0% |
| 3602838 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.69 | 59.0 | 4.36e-01 | 100.0% | 49.3% |
| 4207774 | 301.8.1.3 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › AASDHPPT_N | 0.66 | 56.0 | 3.99e-01 | 96.1% | 80.4% |
| 4253748 | 3317.1.1.2 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB | 0.58 | 39.0 | 3.52e-01 | 72.5% | 81.3% |
| 4960131 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 48.0 | 3.12e-01 | 94.1% | 41.7% |
| 3706047 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.55 | 38.0 | 3.75e-01 | 74.5% | 74.5% |