←Back to structures
IMGVR_UViG_3300025393_000079-3300025393-Ga0208041_10055805
Arc-VirIMGVR_UViG_3300025393_000079-3300025393-Ga0208041_10055805
Identity
- Kingdom:
- archaea
Quality
77.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-49
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5hwoA00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.69 | 56.0 | 3.36e-01 | 95.9% | 62.7% |
| 7xkcA01 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.67 | 51.0 | 4.48e-01 | 93.9% | 54.3% |
| 1cseI00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.66 | 51.0 | 4.84e-01 | 93.9% | 71.4% |
| 3w0eA00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.64 | 46.0 | 4.24e-01 | 93.9% | 58.8% |
| 6lpwA02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.62 | 53.0 | 3.52e-01 | 100.0% | 68.9% |
| 2ewvA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 50.0 | 3.26e-01 | 100.0% | 39.4% |
| 3i99A01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.58 | 45.0 | 4.07e-01 | 95.9% | 59.5% |
| 1z6aA01 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.58 | 45.0 | 3.08e-01 | 89.8% | 100.0% |
| 4yn3A01 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.58 | 45.0 | 2.81e-01 | 93.9% | 20.8% |
| 1yz4B01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 41.0 | 2.93e-01 | 100.0% | 24.8% |
| 1gm5A04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 47.0 | 3.24e-01 | 98.0% | 32.7% |
| 2ejqB00 | 3.30.2010.20 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.56 | 43.0 | 3.54e-01 | 98.0% | 55.7% |
| 4l7aA00 | 3.40.390.70 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › | 0.56 | 42.0 | 2.73e-01 | 85.7% | 39.8% |
| 1h19A02 | 3.30.2010.30 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.54 | 42.0 | 3.55e-01 | 93.9% | 59.8% |
| 1hskA02 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.54 | 43.0 | 3.70e-01 | 93.9% | 52.3% |
| 1h3mB00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.54 | 44.0 | 2.97e-01 | 95.9% | 88.5% |
| 2hcmA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 42.0 | 3.14e-01 | 93.9% | 49.7% |
| 2dyjA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.53 | 41.0 | 3.46e-01 | 89.8% | 91.2% |
| 5du9B02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.52 | 42.0 | 2.83e-01 | 93.9% | 85.3% |
| 4dovA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.52 | 38.0 | 2.79e-01 | 81.6% | 75.2% |
| 1kl7A03 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 39.0 | 2.99e-01 | 93.9% | 77.6% |
| 4o95A01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.52 | 39.0 | 3.36e-01 | 89.8% | 75.8% |
| 4fajA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.51 | 43.0 | 2.86e-01 | 98.0% | 21.7% |
| 1y1lA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 40.0 | 3.20e-01 | 98.0% | 71.8% |
| 1ii2B01 | 3.40.449.10 | Alpha Beta › 3-Layer(aba) Sandwich › Phosphoenolpyruvate Carboxykinase; domain 1 › Phosphoenolpyruvate Carboxykinase, domain 1 | 0.51 | 45.0 | 3.03e-01 | 100.0% | 51.1% |
| 3pnrA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 39.0 | 2.67e-01 | 95.9% | 71.7% |
| 3d1pA00 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.50 | 39.0 | 3.10e-01 | 93.9% | 84.2% |
| 1e3mB02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.50 | 33.0 | 2.61e-01 | 71.4% | 47.3% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4003458 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.69 | 57.0 | 3.70e-01 | 98.0% | 34.2% |
| 151608 | 294.1.1.1 ↗ | a+b two layers › CI-2 family of serine protease inhibitors-like › CI-2 family of serine protease inhibitors › CI-2 family of serine protease inhibitors › potato_inhibit | 0.68 | 53.0 | 4.81e-01 | 93.9% | 63.4% |
| 3221179 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.65 | 51.0 | 3.58e-01 | 95.9% | 45.3% |
| 3339579 | 2007.1.3.36 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Exostosin_GT47 | 0.64 | 44.0 | 3.10e-01 | 100.0% | 22.0% |
| 4973169 | 7518.1.1.0 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like | 0.63 | 51.0 | 4.25e-01 | 100.0% | 85.0% |
| 1765553 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.59 | 49.0 | 3.71e-01 | 98.0% | 100.0% |
| 4194668 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.59 | 40.0 | 3.15e-01 | 93.9% | 33.3% |
| 4076865 | 7516.1.1.24 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 | 0.59 | 47.0 | 3.12e-01 | 100.0% | 74.0% |
| 3545685 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.58 | 48.0 | 3.01e-01 | 100.0% | 42.5% |
| 3626005 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.57 | 44.0 | 3.34e-01 | 93.9% | 78.5% |
| 3838999 | 7570.1.1.0 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain | 0.56 | 46.0 | 3.71e-01 | 98.0% | 61.9% |
| 3975609 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.55 | 43.0 | 3.67e-01 | 100.0% | 70.0% |
| 3948250 | 304.124.1.9 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › Phage_tail_terminator_9 | 0.55 | 43.0 | 3.16e-01 | 93.9% | 29.7% |
| 3619068 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.55 | 42.0 | 2.95e-01 | 87.8% | 78.9% |
| 4198253 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.54 | 45.0 | 3.16e-01 | 98.0% | 63.4% |
| 3940281 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 38.0 | 2.72e-01 | 83.7% | 21.8% |
| 3791143 | 2007.2.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › DSPc | 0.54 | 42.0 | 2.93e-01 | 93.9% | 37.2% |
| 3599998 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.53 | 42.0 | 3.04e-01 | 93.9% | 51.5% |
| 4660064 | 2484.1.1.37 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Pan_kinase | 0.53 | 44.0 | 3.38e-01 | 100.0% | 76.2% |
| 3789613 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.52 | 40.0 | 3.28e-01 | 89.8% | 70.5% |
| 3927568 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.52 | 46.0 | 2.78e-01 | 100.0% | 33.0% |
| 5009610 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.52 | 38.0 | 2.36e-01 | 81.6% | 49.3% |
| 3785718 | 2007.2.5.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase | 0.51 | 42.0 | 2.93e-01 | 100.0% | 93.7% |
| 5038459 | 2004.1.1.85 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase | 0.51 | 38.0 | 2.57e-01 | 98.0% | 90.9% |
| 3501420 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 40.0 | 2.61e-01 | 100.0% | 44.8% |
| 5002882 | 4207.1.1.133 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › BREX_BrxC_4th | 0.51 | 43.0 | 3.23e-01 | 95.9% | 45.6% |
| 3202024 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.50 | 40.0 | 2.74e-01 | 100.0% | 44.9% |
| 3928509 | 2498.1.1.9 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 | 0.50 | 40.0 | 2.61e-01 | 98.0% | 26.3% |