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IMGVR_UViG_3300025439_000068-3300025439-Ga0208323_100200620

Arc-Vir

IMGVR_UViG_3300025439_000068-3300025439-Ga0208323_100200620

Quality

89.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-60
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 66.0 5.79e-01 84.7% 61.9%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 63.0 5.36e-01 83.1% 51.6%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 63.0 4.43e-01 83.1% 29.8%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 4.65e-01 84.7% 38.7%
3df8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 61.0 4.93e-01 86.4% 45.0%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 4.62e-01 86.4% 34.9%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 62.0 4.62e-01 84.7% 41.1%
5dcaA11 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 53.0 4.36e-01 71.2% 40.0%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 61.0 4.64e-01 86.4% 39.4%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 61.0 5.18e-01 83.1% 53.8%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 61.0 4.60e-01 86.4% 37.1%
2pg4A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 58.0 5.04e-01 81.4% 53.8%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 61.0 5.03e-01 86.4% 50.5%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 4.56e-01 86.4% 34.9%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 56.0 4.62e-01 79.7% 45.5%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 58.0 4.86e-01 83.1% 55.1%
1z7uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 4.85e-01 86.4% 50.0%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 4.92e-01 84.7% 55.0%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 5.03e-01 86.4% 56.0%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 4.82e-01 83.1% 53.8%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 4.56e-01 88.1% 50.0%
4xrfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 4.15e-01 81.4% 36.6%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 4.64e-01 86.4% 47.3%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 54.0 4.64e-01 79.7% 56.2%
2obpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 50.0 4.51e-01 74.6% 55.6%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 4.47e-01 76.3% 100.0%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.68 45.0 3.97e-01 71.2% 49.4%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 4.06e-01 83.1% 44.9%
3zcoA00 1.10.10.2450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 50.0 3.96e-01 81.4% 37.8%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.68 43.0 3.71e-01 74.6% 41.9%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 45.0 3.84e-01 71.2% 45.7%
7kfuC02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.65 51.0 3.47e-01 88.1% 58.8%
1e6vB02 1.20.840.10 Mainly Alpha › Up-down Bundle › Methyl-coenzyme M Reductase; Chain B, domain 2 › Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal 0.64 49.0 3.09e-01 81.4% 42.2%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 3.99e-01 79.7% 48.9%
5ly3A02 3.30.420.570 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.60 42.0 2.82e-01 72.9% 82.6%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 45.0 3.89e-01 86.4% 48.1%
4fhdA02 3.80.30.30 Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme › 0.56 42.0 2.94e-01 94.9% 22.5%
3ltoA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.56 42.0 3.16e-01 89.8% 35.1%
3getA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 39.0 3.40e-01 79.7% 50.0%
2jmlA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.53 35.0 3.21e-01 78.0% 48.1%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 35.0 3.05e-01 71.2% 43.0%
2ab5A02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.50 41.0 3.28e-01 96.6% 94.8%
2jugA01 1.10.10.1830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Non-ribosomal peptide synthase, adenylation domain 0.50 30.0 3.08e-01 72.9% 61.8%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4971296 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.90 64.0 5.74e-01 74.6% 56.2%
2507077 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.85 64.0 4.46e-01 79.7% 28.2%
5006536 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.83 65.0 5.62e-01 84.7% 57.8%
5069873 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 66.0 5.82e-01 86.4% 61.2%
4958659 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 61.0 5.30e-01 81.4% 54.4%
4986510 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.80 64.0 4.71e-01 86.4% 36.7%
5005196 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 61.0 5.49e-01 81.4% 61.3%
3261727 101.1.2.111 alpha arrays › HTH › HTH › winged helix domain › RQC 0.80 57.0 4.59e-01 76.3% 39.1%
5031727 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.79 61.0 5.20e-01 83.1% 52.6%
3960412 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 57.0 4.24e-01 79.7% 32.1%
3951258 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.78 58.0 4.19e-01 78.0% 30.7%
3282985 101.1.2.508 alpha arrays › HTH › HTH › winged helix domain › PF25872 0.78 55.0 4.86e-01 74.6% 51.8%
4980177 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.78 65.0 5.12e-01 91.5% 48.3%
5049162 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.78 63.0 4.44e-01 86.4% 45.3%
4963272 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 55.0 4.55e-01 78.0% 44.0%
4931502 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 62.0 5.34e-01 88.1% 56.7%
3942501 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 57.0 4.89e-01 78.0% 51.1%
4927802 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 60.0 4.36e-01 84.7% 33.1%
167429 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.77 62.0 4.56e-01 86.4% 34.9%
3718665 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 52.0 4.59e-01 72.9% 49.4%
3979431 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 58.0 4.25e-01 81.4% 32.7%
5023957 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.76 53.0 4.73e-01 72.9% 55.0%
3412689 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.75 54.0 4.29e-01 88.1% 37.5%
3434870 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.75 53.0 4.78e-01 74.6% 55.0%
4990701 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 56.0 4.27e-01 79.7% 39.2%
5053763 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 53.0 4.57e-01 74.6% 52.2%
4928989 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 58.0 4.93e-01 83.1% 60.2%
3282605 101.1.2.508 alpha arrays › HTH › HTH › winged helix domain › PF25872 0.74 53.0 4.88e-01 78.0% 57.5%
4982733 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 56.0 4.79e-01 79.7% 53.3%
4968041 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.73 57.0 4.28e-01 84.7% 40.7%
4941357 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 5.10e-01 83.1% 63.7%
3426143 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.73 59.0 4.80e-01 100.0% 47.0%
4969597 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 57.0 4.21e-01 86.4% 34.5%
3205602 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.72 52.0 4.49e-01 94.9% 50.0%
5047052 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.72 52.0 3.77e-01 78.0% 28.6%
5046626 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 56.0 4.12e-01 86.4% 47.1%
3287283 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 54.0 4.37e-01 81.4% 44.5%
4992965 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 4.76e-01 100.0% 45.6%
5074663 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 48.0 4.17e-01 74.6% 49.4%
5012277 101.1.2.904 alpha arrays › HTH › HTH › winged helix domain › HTH_38 0.69 49.0 4.59e-01 78.0% 60.0%
5019927 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 48.0 4.05e-01 74.6% 43.9%
4955571 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.69 54.0 4.37e-01 86.4% 48.7%
5018467 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 52.0 4.56e-01 86.4% 58.1%
3380214 207.1.1.230 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › WHD_ROQ1 0.67 54.0 3.37e-01 93.2% 17.8%
4993306 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 50.0 4.30e-01 79.7% 52.2%
3364027 101.1.2.245 alpha arrays › HTH › HTH › winged helix domain › PORR 0.66 51.0 3.41e-01 81.4% 22.3%
4979350 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 52.0 4.06e-01 93.2% 41.7%
5036162 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 52.0 4.34e-01 91.5% 50.9%
138578 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.64 47.0 4.08e-01 79.7% 50.0%
5040012 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.64 49.0 4.33e-01 94.9% 55.6%
4962040 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 48.0 3.70e-01 81.4% 41.4%
4968342 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 51.0 4.35e-01 100.0% 53.3%
4967496 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 50.0 4.33e-01 91.5% 57.0%
5040910 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.63 52.0 4.77e-01 98.3% 68.8%
5044596 101.1.2.110 alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.63 48.0 4.21e-01 86.4% 58.5%
5037176 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.62 47.0 4.23e-01 86.4% 60.0%
4965712 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.61 51.0 4.38e-01 93.2% 65.3%
5039360 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.61 50.0 4.12e-01 100.0% 49.5%
3491348 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 42.0 3.78e-01 74.6% 63.5%
4942703 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 51.0 3.83e-01 93.2% 62.1%
3630462 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 36.0 2.75e-01 81.4% 25.7%
3738604 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 40.0 3.47e-01 79.7% 51.4%
4032391 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.55 40.0 3.58e-01 78.0% 57.6%
3229175 109.4.1.1219 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Mybbp1a 0.54 44.0 2.83e-01 94.9% 18.5%
4968989 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 40.0 3.64e-01 83.1% 64.7%
3933404 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.53 40.0 3.06e-01 84.7% 44.0%
4972761 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.53 39.0 2.71e-01 83.1% 69.7%
4463557 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.51 33.0 2.80e-01 71.2% 41.1%
4025072 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.50 39.0 3.22e-01 84.7% 86.1%
4034249 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.50 36.0 3.25e-01 79.7% 53.3%