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IMGVR_UViG_3300025446_000061-3300025446-Ga0208038_10011528
Arc-VirIMGVR_UViG_3300025446_000061-3300025446-Ga0208038_10011528
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 297-348
D2
medium
residues 32-150
Domain cluster:
rep: MW960030.1__QWY82978.1__X__00024__D5-103
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vk1A01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.81 | 57.0 | 6.10e-01 | 91.6% | 83.3% |
| 1xw3A01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.73 | 55.0 | 6.03e-01 | 89.9% | 95.8% |
| 2hwjA01 | 3.90.1530.10 | Alpha Beta › Alpha-Beta Complex › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain | 0.69 | 55.0 | 5.40e-01 | 88.2% | 78.6% |
| 5m38C00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.52 | 40.0 | 4.11e-01 | 82.4% | 86.8% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5032171 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.88 | 61.0 | 7.18e-01 | 89.1% | 100.0% |
| 3942579 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.87 | 54.0 | 6.85e-01 | 79.0% | 100.0% |
| 4927766 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.87 | 56.0 | 6.59e-01 | 79.8% | 91.8% |
| 4344404 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.85 | 62.0 | 6.74e-01 | 91.6% | 89.0% |
| 3945776 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.85 | 64.0 | 7.13e-01 | 93.3% | 97.9% |
| 4862436 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.84 | 65.0 | 7.19e-01 | 92.4% | 100.0% |
| 4929132 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.84 | 64.0 | 7.18e-01 | 94.1% | 100.0% |
| 3946729 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.80 | 58.0 | 6.49e-01 | 79.8% | 94.7% |
| 5073612 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.80 | 66.0 | 7.04e-01 | 100.0% | 100.0% |
| 2387795 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.80 | 57.0 | 6.53e-01 | 90.8% | 100.0% |
| 2061501 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.79 | 57.0 | 6.23e-01 | 90.8% | 88.9% |
| 3948471 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.77 | 67.0 | 6.89e-01 | 98.3% | 96.5% |
| 3210197 | 876.1.1.6 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › PF29418 | 0.76 | 62.0 | 6.66e-01 | 88.2% | 100.0% |
| 5073795 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.75 | 67.0 | 6.57e-01 | 94.1% | 100.0% |
| 5083282 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.75 | 58.0 | 6.32e-01 | 91.6% | 98.0% |
| 5031072 | 876.1.1.9 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB | 0.74 | 66.0 | 6.11e-01 | 94.1% | 97.9% |
| 3178377 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.71 | 59.0 | 5.82e-01 | 87.4% | 92.8% |
| 4947338 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.70 | 66.0 | 5.53e-01 | 100.0% | 93.7% |
| 4370861 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.70 | 60.0 | 6.28e-01 | 99.2% | 100.0% |
| 4942529 | 876.1.1.10 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF1015 | 0.69 | 63.0 | 5.08e-01 | 96.6% | 94.4% |
| 5030163 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.68 | 58.0 | 5.94e-01 | 90.8% | 100.0% |
| 3701649 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.68 | 54.0 | 5.84e-01 | 87.4% | 99.0% |
| 3602844 | 876.1.1.1 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParBc | 0.65 | 54.0 | 5.39e-01 | 89.1% | 85.8% |
| 5080912 | 876.1.1.9 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DndB | 0.65 | 57.0 | 5.55e-01 | 94.1% | 96.1% |
| 3283211 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.64 | 51.0 | 4.89e-01 | 84.9% | 100.0% |
| 5081788 | 876.1.1.4 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin › DUF262 | 0.64 | 53.0 | 5.52e-01 | 90.8% | 97.3% |
| 5067429 | 876.1.1.0 ↗ | a+b complex topology › ParB/Sulfiredoxin › ParB/Sulfiredoxin › ParB/Sulfiredoxin | 0.57 | 48.0 | 5.01e-01 | 94.1% | 97.3% |
D3
medium
residues 192-236
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.75 | 62.0 | 5.03e-01 | 100.0% | 76.8% |
| 6xxvC00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.74 | 54.0 | 4.00e-01 | 77.8% | 36.9% |
| 3if8B02 | 1.20.58.730 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 62.0 | 4.93e-01 | 100.0% | 53.0% |
| 4uz0A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.70 | 58.0 | 4.79e-01 | 97.8% | 51.7% |
| 2yevA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.68 | 47.0 | 3.99e-01 | 73.3% | 56.8% |
| 1qr0A01 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.66 | 50.0 | 3.85e-01 | 97.8% | 33.6% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.65 | 49.0 | 4.69e-01 | 88.9% | 83.6% |
| 2rp4A00 | 6.10.280.60 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain | 0.65 | 44.0 | 3.77e-01 | 75.6% | 45.1% |
| 4irlB02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.65 | 51.0 | 4.21e-01 | 95.6% | 47.3% |
| 6fakA02 | 1.10.246.10 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.61 | 50.0 | 4.29e-01 | 100.0% | 86.4% |
| 4qxbB00 | 6.10.280.250 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 45.0 | 3.90e-01 | 77.8% | 64.7% |
| 2mn4A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.60 | 48.0 | 4.00e-01 | 100.0% | 47.9% |
| 2fq3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 43.0 | 3.66e-01 | 95.6% | 48.2% |
| 1psyA01 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.54 | 38.0 | 3.13e-01 | 80.0% | 40.0% |
| 2v40A02 | 1.10.300.10 | Mainly Alpha › Orthogonal Bundle › Adenylosuccinate Synthetase, subunit A; domain 2 › Adenylosuccinate Synthetase, subunit A, domain 2 | 0.52 | 45.0 | 3.68e-01 | 100.0% | 70.5% |
| 6dntA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.52 | 41.0 | 3.08e-01 | 86.7% | 88.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3587505 | 3317.1.1.2 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB | 0.78 | 62.0 | 5.50e-01 | 91.1% | 61.5% |
| 2849885 | 3317.1.1.0 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain | 0.76 | 60.0 | 5.48e-01 | 91.1% | 66.7% |
| 4224437 | 3317.1.1.2 ↗ | alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB | 0.75 | 62.0 | 5.38e-01 | 93.3% | 60.0% |
| 3854183 | 3682.1.1.0 ↗ | alpha duplicates or obligate multimers › IcmQ dimerization domain › IcmQ dimerization domain › IcmQ dimerization domain | 0.75 | 54.0 | 4.67e-01 | 77.8% | 50.0% |
| 3873232 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.73 | 61.0 | 5.13e-01 | 97.8% | 57.5% |
| 3057440 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.69 | 58.0 | 4.72e-01 | 97.8% | 50.0% |
| 3931556 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.69 | 58.0 | 4.55e-01 | 100.0% | 44.0% |
| 3908029 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.69 | 56.0 | 4.59e-01 | 97.8% | 49.5% |
| 3502278 | 110.1.1.2 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › CARD | 0.68 | 57.0 | 4.58e-01 | 95.6% | 50.0% |
| 3739517 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 43.0 | 2.76e-01 | 80.0% | 14.8% |
| 4046386 | 301.8.1.3 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › AASDHPPT_N | 0.58 | 47.0 | 3.65e-01 | 95.6% | 39.1% |
| 3283643 | 301.8.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase | 0.58 | 46.0 | 3.61e-01 | 95.6% | 39.0% |
| 4943451 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.56 | 39.0 | 2.49e-01 | 77.8% | 12.5% |
| 3222360 | 103.1.1.21 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › AMPK_alpha_AID | 0.54 | 42.0 | 4.25e-01 | 84.4% | 100.0% |