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IMGVR_UViG_3300025446_000377-3300025446-Ga0208038_10043078
Arc-VirIMGVR_UViG_3300025446_000377-3300025446-Ga0208038_10043078
Identity
- Kingdom:
- archaea
Quality
90.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-61
Domain cluster:
representative
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3960624 | 7525.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like | 0.76 | 68.0 | 5.03e-01 | 100.0% | 44.5% |
| 4505497 | 103.5.1.1 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › PYC_OADA | 0.58 | 32.0 | 3.21e-01 | 70.5% | 49.2% |
| 3193101 | 192.31.1.0 ↗ | alpha bundles › Long alpha-hairpin › CP12 › CP12 | 0.54 | 36.0 | 3.37e-01 | 70.5% | 87.5% |
D2
medium
residues 62-115
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bsoA00 | 2.10.220.10 | Mainly Beta › Ribbon › Hormone Receptor, Insulin-like Growth Factor Receptor 1; Chain A domain 2 › Hormone Receptor, Insulin-like Growth Factor Receptor 1; Chain A, domain 2 | 0.57 | 36.0 | 3.05e-01 | 72.2% | 35.1% |
| 6mfxA02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.56 | 38.0 | 2.70e-01 | 70.4% | 71.9% |
| 2mlgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 35.0 | 3.16e-01 | 100.0% | 46.8% |
| 2x24A02 | 2.40.460.10 | Mainly Beta › Beta Barrel › ClpP/crotonase fold › Biotin dependent carboxylase carboxyltransferase | 0.54 | 35.0 | 3.36e-01 | 81.5% | 56.1% |
| 3oesA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 37.0 | 2.65e-01 | 72.2% | 27.4% |
| 5h7kA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 2.55e-01 | 79.6% | 37.6% |
| 1zcdA00 | 1.20.1530.10 | Mainly Alpha › Up-down Bundle › Na+/H+ antiporter like fold › Na+/H+ antiporter like domain | 0.52 | 42.0 | 2.61e-01 | 94.4% | 65.7% |
| 4joiC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 41.0 | 3.39e-01 | 100.0% | 87.3% |
| 2z86D02 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.50 | 42.0 | 2.78e-01 | 100.0% | 88.1% |
| 5cqgA02 | 3.10.10.20 | Alpha Beta › Roll › HIV Type 1 Reverse Transcriptase; Chain A, domain 1 › | 0.50 | 38.0 | 3.48e-01 | 83.3% | 72.2% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3575704 | 7525.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_1 | 0.62 | 52.0 | 3.84e-01 | 98.1% | 36.8% |
| 4993775 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.57 | 36.0 | 3.66e-01 | 75.9% | 63.6% |
| 4946664 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.56 | 44.0 | 3.12e-01 | 88.9% | 45.9% |
| 5069373 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.53 | 43.0 | 3.31e-01 | 94.4% | 88.1% |
| 4004145 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.53 | 37.0 | 2.50e-01 | 75.9% | 45.6% |
| 3505891 | 2004.1.1.168 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRPRB | 0.52 | 36.0 | 2.43e-01 | 74.1% | 29.8% |
| 4996855 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 36.0 | 2.77e-01 | 98.1% | 32.0% |
| 4933873 | 1.1.3.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB › MazE_antitoxin | 0.52 | 33.0 | 3.37e-01 | 72.2% | 65.5% |
| 4013195 | 206.1.3.14 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSH_synth_ATP | 0.51 | 40.0 | 2.84e-01 | 85.2% | 60.6% |
| 3915883 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.51 | 35.0 | 2.11e-01 | 75.9% | 9.2% |
| 5071762 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 36.0 | 2.72e-01 | 98.1% | 32.0% |
| 3839278 | 304.15.1.0 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain | 0.51 | 35.0 | 2.85e-01 | 75.9% | 55.8% |
| 3900493 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.51 | 35.0 | 2.36e-01 | 75.9% | 17.3% |
| 3275258 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.50 | 34.0 | 2.48e-01 | 72.2% | 24.7% |
| 4955758 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.50 | 35.0 | 2.28e-01 | 74.1% | 15.9% |