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IMGVR_UViG_3300025458_000424-3300025458-Ga0209559_100090112
Arc-VirIMGVR_UViG_3300025458_000424-3300025458-Ga0209559_100090112
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-130
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00565.24 best | SNase | 31.7 | 2.40e-07 | 71.7% | 68.2% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qmgA02 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.89 | 77.0 | 6.82e-01 | 100.0% | 66.7% |
| 1a2tA00 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.88 | 81.0 | 7.36e-01 | 100.0% | 75.6% |
| 3bdlA02 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.85 | 80.0 | 6.89e-01 | 100.0% | 67.5% |
| 2wacA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.83 | 66.0 | 6.23e-01 | 100.0% | 70.6% |
| 3bdlA01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.79 | 74.0 | 6.27e-01 | 100.0% | 72.3% |
| 4qmgC01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.78 | 74.0 | 6.33e-01 | 100.0% | 67.9% |
| 3ntkB01 | 2.40.50.790 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.75 | 56.0 | 6.16e-01 | 96.2% | 96.5% |
| 5fkaC02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 42.0 | 4.65e-01 | 85.8% | 93.8% |
| 1eu3A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 42.0 | 4.69e-01 | 85.8% | 95.0% |
| 4fnfA00 | 2.40.50.50 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 39.0 | 4.11e-01 | 85.8% | 79.6% |
| 1v58A01 | 3.10.450.70 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal | 0.54 | 27.0 | 3.20e-01 | 95.3% | 69.0% |
| 5uayA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 31.0 | 3.46e-01 | 96.2% | 72.3% |
| 2x8xX02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 30.0 | 3.39e-01 | 100.0% | 73.7% |
| 6j09A02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 29.0 | 3.35e-01 | 98.1% | 73.1% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3385491 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.93 | 78.0 | 6.63e-01 | 100.0% | 57.5% |
| 3642215 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.92 | 79.0 | 6.59e-01 | 100.0% | 57.0% |
| 3261189 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.92 | 80.0 | 6.69e-01 | 100.0% | 58.2% |
| 3965688 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.91 | 77.0 | 7.01e-01 | 100.0% | 68.9% |
| 4954340 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.90 | 75.0 | 7.16e-01 | 100.0% | 76.7% |
| 3276512 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.89 | 72.0 | 6.66e-01 | 100.0% | 68.5% |
| 5054098 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.89 | 73.0 | 6.89e-01 | 100.0% | 72.8% |
| 3611847 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 78.0 | 6.57e-01 | 100.0% | 59.4% |
| 4928964 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.88 | 74.0 | 7.17e-01 | 100.0% | 80.0% |
| 3565765 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.88 | 74.0 | 6.65e-01 | 100.0% | 66.4% |
| 3785402 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 83.0 | 7.03e-01 | 100.0% | 68.1% |
| 3713169 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 80.0 | 6.49e-01 | 100.0% | 56.7% |
| 4022903 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.87 | 79.0 | 6.70e-01 | 100.0% | 63.1% |
| 4534120 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.87 | 83.0 | 6.33e-01 | 100.0% | 52.1% |
| 4589357 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 79.0 | 6.70e-01 | 100.0% | 63.1% |
| 3596658 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.86 | 79.0 | 6.52e-01 | 100.0% | 58.3% |
| 3972842 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 78.0 | 7.21e-01 | 100.0% | 76.9% |
| 4965290 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 82.0 | 7.16e-01 | 100.0% | 78.7% |
| 4929215 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.86 | 74.0 | 7.04e-01 | 100.0% | 79.2% |
| 3879038 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.86 | 66.0 | 6.58e-01 | 97.2% | 77.3% |
| 152457 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 79.0 | 6.88e-01 | 100.0% | 68.5% |
| 3582420 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.86 | 77.0 | 6.43e-01 | 100.0% | 58.8% |
| 3883145 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.85 | 66.0 | 7.01e-01 | 100.0% | 90.5% |
| 3807059 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 81.0 | 6.53e-01 | 100.0% | 81.6% |
| 4023463 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 78.0 | 6.80e-01 | 100.0% | 68.0% |
| 3949229 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 80.0 | 7.02e-01 | 100.0% | 71.7% |
| 4026268 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.85 | 81.0 | 6.70e-01 | 100.0% | 65.3% |
| 4510334 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 76.0 | 7.13e-01 | 100.0% | 80.0% |
| 5031365 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 80.0 | 6.24e-01 | 100.0% | 54.6% |
| 3609624 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 73.0 | 6.47e-01 | 100.0% | 66.9% |
| 4935079 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 80.0 | 7.39e-01 | 100.0% | 95.4% |
| 3921697 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.84 | 69.0 | 6.85e-01 | 100.0% | 82.7% |
| 3393302 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.84 | 73.0 | 7.21e-01 | 100.0% | 87.3% |
| 3485853 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.84 | 79.0 | 6.43e-01 | 100.0% | 58.3% |
| 3514893 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 77.0 | 6.49e-01 | 100.0% | 62.4% |
| 3765273 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.83 | 67.0 | 6.82e-01 | 100.0% | 85.7% |
| 4026270 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.83 | 79.0 | 6.63e-01 | 100.0% | 72.1% |
| 3535178 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.83 | 65.0 | 6.11e-01 | 100.0% | 68.8% |
| 3567262 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.82 | 65.0 | 6.46e-01 | 98.1% | 79.1% |
| 3277340 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.82 | 76.0 | 6.47e-01 | 100.0% | 64.4% |
| 3194464 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.82 | 78.0 | 6.57e-01 | 100.0% | 66.1% |
| 3785400 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.82 | 68.0 | 6.24e-01 | 100.0% | 68.9% |
| 3738104 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.82 | 78.0 | 6.52e-01 | 100.0% | 67.3% |
| 3393325 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.81 | 66.0 | 6.44e-01 | 100.0% | 78.3% |
| 3519120 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.81 | 66.0 | 6.20e-01 | 100.0% | 72.0% |
| 3407825 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.81 | 63.0 | 6.68e-01 | 100.0% | 90.5% |
| 4026269 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.81 | 77.0 | 6.87e-01 | 100.0% | 75.7% |
| 4030587 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.81 | 76.0 | 6.39e-01 | 100.0% | 63.6% |
| 3366163 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.80 | 75.0 | 6.42e-01 | 100.0% | 66.3% |
| 3596660 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.79 | 67.0 | 6.09e-01 | 100.0% | 69.6% |
| 3401711 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.79 | 66.0 | 5.80e-01 | 100.0% | 62.0% |
| 3218843 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.78 | 59.0 | 6.49e-01 | 97.2% | 97.6% |
| 3999675 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.77 | 71.0 | 7.00e-01 | 100.0% | 92.7% |
| 3485871 | 2.6.1.1 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease › SNase | 0.77 | 63.0 | 5.67e-01 | 85.8% | 71.4% |
| 3409459 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.76 | 62.0 | 6.12e-01 | 100.0% | 81.8% |
| 3414044 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.76 | 57.0 | 6.34e-01 | 99.1% | 98.8% |
| 3577387 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.76 | 71.0 | 6.94e-01 | 100.0% | 93.9% |
| 3414735 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.75 | 62.0 | 6.19e-01 | 98.1% | 84.5% |
| 3765275 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.75 | 67.0 | 6.18e-01 | 100.0% | 76.9% |
| 3562167 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.75 | 67.0 | 6.25e-01 | 100.0% | 77.7% |
| 4281059 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.73 | 63.0 | 6.24e-01 | 100.0% | 88.2% |
| 3230484 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.73 | 66.0 | 6.35e-01 | 100.0% | 85.0% |
| 3936498 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.65 | 59.0 | 5.40e-01 | 99.1% | 95.6% |
| 3824883 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.56 | 32.0 | 3.50e-01 | 95.3% | 68.2% |
| 3296274 | 3121.1.1.3 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA_2 | 0.53 | 30.0 | 3.42e-01 | 100.0% | 74.7% |
| 3802579 | 3121.1.1.0 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain | 0.53 | 29.0 | 3.34e-01 | 99.1% | 73.3% |
| 3688038 | 2.1.1.194 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Mit_ribos_Mrp51 | 0.51 | 36.0 | 3.38e-01 | 86.8% | 60.0% |