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IMGVR_UViG_3300025459_000250-3300025459-Ga0208689_10034061
Arc-VirIMGVR_UViG_3300025459_000250-3300025459-Ga0208689_10034061
Identity
- Kingdom:
- archaea
Quality
87.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-64
Domain cluster:
representative
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6xwtA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.84 | 70.0 | 6.41e-01 | 91.2% | 74.3% |
| 4nrjB01 | 3.90.20.10 | Alpha Beta › Alpha-Beta Complex › Hemagglutinin Ectodomain; Chain B › | 0.84 | 66.0 | 4.57e-01 | 91.2% | 29.2% |
| 1o6zA01 | 3.90.110.10 | Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal | 0.80 | 58.0 | 4.09e-01 | 78.9% | 26.7% |
| 4bwiB01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.80 | 69.0 | 4.70e-01 | 94.7% | 54.2% |
| 3v9rB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.79 | 64.0 | 5.94e-01 | 87.7% | 70.8% |
| 3hcyA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.77 | 62.0 | 4.55e-01 | 87.7% | 58.6% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.76 | 58.0 | 4.18e-01 | 91.2% | 30.9% |
| 1egdA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.74 | 60.0 | 4.38e-01 | 96.5% | 34.8% |
| 1ivhA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.72 | 57.0 | 4.20e-01 | 96.5% | 34.0% |
| 5iduC03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.72 | 58.0 | 4.12e-01 | 96.5% | 30.8% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 50.0 | 4.18e-01 | 96.5% | 47.1% |
| 1hp1A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.63 | 38.0 | 2.34e-01 | 75.4% | 10.7% |
| 1omsA00 | 3.30.70.1050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain | 0.62 | 48.0 | 3.87e-01 | 84.2% | 52.6% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3634447 | 4207.1.2.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region | 0.96 | 67.0 | 5.25e-01 | 71.9% | 39.0% |
| 3797514 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.86 | 71.0 | 5.81e-01 | 89.5% | 55.0% |
| 2487395 | 148.1.1.1 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone | 0.85 | 70.0 | 5.74e-01 | 89.5% | 54.5% |
| 3180179 | 148.1.1.15 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-X | 0.81 | 67.0 | 6.06e-01 | 89.5% | 68.0% |
| 3699800 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.73 | 67.0 | 3.90e-01 | 100.0% | 44.0% |
| 4982139 | 633.6.1.1 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA_dh_1 | 0.73 | 57.0 | 4.08e-01 | 82.5% | 32.7% |
| 4999971 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.71 | 64.0 | 5.48e-01 | 100.0% | 67.8% |
| 3987595 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.68 | 51.0 | 4.95e-01 | 80.7% | 71.9% |
| 3875751 | 105.1.1.10 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain › COE1_HLH | 0.62 | 45.0 | 4.23e-01 | 82.5% | 62.9% |
| 3600938 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.59 | 41.0 | 3.14e-01 | 71.9% | 35.4% |