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IMGVR_UViG_3300025459_000250-3300025459-Ga0208689_100340611
Arc-VirIMGVR_UViG_3300025459_000250-3300025459-Ga0208689_100340611
Identity
- Kingdom:
- archaea
Quality
76.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-107
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 47.0 | 4.38e-01 | 89.5% | 54.5% |
| 2j0wA02 | 1.20.120.1320 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain | 0.61 | 49.0 | 5.20e-01 | 97.1% | 96.8% |
| 3f5cB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.57 | 45.0 | 3.78e-01 | 85.7% | 61.7% |
| 4dhiB02 | 1.20.1300.20 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 | 0.55 | 40.0 | 3.65e-01 | 93.3% | 56.6% |
| 1ylmA00 | 1.20.120.580 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like | 0.53 | 45.0 | 4.07e-01 | 91.4% | 84.5% |
| 2yjkC00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 37.0 | 3.28e-01 | 74.3% | 77.7% |
| 2yfaB01 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.52 | 44.0 | 4.21e-01 | 91.4% | 83.2% |
| 3iqtA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.51 | 35.0 | 3.48e-01 | 90.5% | 65.8% |
| 1x9fC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 42.0 | 3.81e-01 | 93.3% | 91.9% |
| 3caxA01 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.50 | 42.0 | 3.30e-01 | 89.5% | 50.7% |
| 1f16A00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.50 | 40.0 | 3.29e-01 | 85.7% | 61.5% |
| 1sxjE03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.50 | 36.0 | 3.76e-01 | 75.2% | 97.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3676983 | 109.4.1.957 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TTI1_N | 0.63 | 35.0 | 3.65e-01 | 75.2% | 58.0% |
| 5007608 | 633.22.1.0 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) | 0.55 | 35.0 | 3.39e-01 | 71.4% | 58.3% |
| 3949582 | 327.11.2.48 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › DUF7168 | 0.54 | 46.0 | 3.58e-01 | 93.3% | 63.0% |
| 3962032 | 109.4.1.2432 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FA_desaturase | 0.53 | 41.0 | 2.93e-01 | 84.8% | 43.7% |
| 3212942 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.52 | 38.0 | 3.57e-01 | 99.0% | 61.5% |
| 5004860 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.50 | 39.0 | 3.55e-01 | 83.8% | 99.3% |