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IMGVR_UViG_3300025460_000098-3300025460-Ga0208562_10032416

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300025460_000098-3300025460-Ga0208562_10032416 ↗
Kingdom:: archaea

Quality

86.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-142

PDB

Domain cluster: rep: IMGVR_UViG_3300009518_000114-3300009518-Ga0116128_10017258__D1-24_57-131

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF13476.13 best	AAA_23	33.9	7.00e-08	97.2%	44.8%

D2 high residues 242-296

PDB

Domain cluster: representative

D3 medium residues 162-206

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ks9A00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.77	53.0	3.12e-01	73.3%	10.5%
4rh7A01	1.20.920.20	Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A ›	0.77	52.0	3.02e-01	71.1%	9.7%
3g27A01	3.30.50.20	Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › prophage-derive protein ybcO	0.76	57.0	5.05e-01	82.2%	86.4%
2lf0A01	4.10.860.10	Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain	0.71	51.0	4.70e-01	77.8%	68.3%
8b6jF01	1.10.287.20	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain	0.70	53.0	4.63e-01	80.0%	62.7%
3ddlA00	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.69	60.0	3.76e-01	100.0%	37.7%
2lm4A01	1.10.150.250	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Flavinator of succinate dehydrogenase	0.68	48.0	3.89e-01	77.8%	53.3%
2q22A00	3.30.360.10	Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2	0.61	46.0	3.24e-01	77.8%	82.3%
2yqzA02	1.10.8.900	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.59	43.0	3.84e-01	80.0%	54.4%
4z5qA00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.59	50.0	3.01e-01	100.0%	33.9%
6gs2C01	3.40.50.880	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain	0.59	51.0	3.21e-01	97.8%	43.2%
3p3cA02	3.30.1700.10	Alpha Beta › 2-Layer Sandwich › lpxc deacetylase, domain 1 › lpxc deacetylase, domain 2	0.52	44.0	3.14e-01	95.6%	29.8%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
178580	5001.1.1.1 ↗	alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1	0.77	53.0	3.12e-01	73.3%	10.5%
3214333	3922.1.1.0 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3	0.72	52.0	3.87e-01	77.8%	33.0%
3269634	192.17.1.0 ↗	alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like	0.69	58.0	5.37e-01	100.0%	76.7%
3943133	130.1.1.0 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif	0.66	49.0	4.93e-01	82.2%	80.0%
4292699	130.1.1.3 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Rho_N	0.62	44.0	4.44e-01	82.2%	77.8%
3619900	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.60	46.0	4.04e-01	82.2%	76.9%