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IMGVR_UViG_3300025472_000049-3300025472-Ga0208692_10019304
Arc-VirIMGVR_UViG_3300025472_000049-3300025472-Ga0208692_10019304
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-17_143-386
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rbyA02 | 2.40.128.310 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain | 0.59 | 23.0 | 3.77e-01 | 96.9% | 96.8% |
| 7x7zA01 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.53 | 27.0 | 3.69e-01 | 93.9% | 92.1% |
D2
medium
residues 18-142
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v31A01 | 2.40.30.180 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain | 0.77 | 53.0 | 5.99e-01 | 76.8% | 91.8% |
| 6oqrA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.73 | 41.0 | 4.69e-01 | 71.2% | 75.6% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.70 | 46.0 | 4.90e-01 | 70.4% | 74.8% |
| 4yhbA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.69 | 51.0 | 5.08e-01 | 76.0% | 96.9% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.68 | 49.0 | 4.89e-01 | 74.4% | 73.3% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.68 | 46.0 | 5.17e-01 | 70.4% | 88.8% |
| 1krhA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.67 | 47.0 | 5.20e-01 | 71.2% | 100.0% |
| 4g1vA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 46.0 | 4.72e-01 | 71.2% | 97.5% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 46.0 | 5.03e-01 | 71.2% | 100.0% |
| 2ok7A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 46.0 | 4.87e-01 | 72.8% | 100.0% |
| 5i4dA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 32.0 | 3.95e-01 | 72.8% | 75.0% |
| 2r6hA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 45.0 | 4.32e-01 | 71.2% | 99.3% |
| 1cqxA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 45.0 | 4.77e-01 | 72.0% | 97.3% |
| 1n08A00 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.64 | 48.0 | 4.51e-01 | 78.4% | 91.6% |
| 2awnC02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 29.0 | 3.53e-01 | 72.0% | 64.1% |
| 4me3A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 32.0 | 3.61e-01 | 83.2% | 62.9% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 43.0 | 4.64e-01 | 71.2% | 94.3% |
| 1e62A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 50.0 | 5.02e-01 | 87.2% | 100.0% |
| 5ylyA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 42.0 | 4.45e-01 | 72.0% | 97.3% |
| 4pofA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 32.0 | 3.46e-01 | 80.0% | 64.4% |
| 1k85A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 34.0 | 3.94e-01 | 74.4% | 85.2% |
| 1t9hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 29.0 | 3.56e-01 | 85.6% | 83.6% |
| 3gwqA01 | 2.40.37.20 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain | 0.55 | 42.0 | 3.79e-01 | 95.2% | 58.6% |
| 4n0rA03 | 2.60.40.3950 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 37.0 | 3.94e-01 | 71.2% | 81.8% |
| 1x4zA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 36.0 | 3.93e-01 | 94.4% | 86.0% |
| 3qt2A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 34.0 | 3.75e-01 | 96.0% | 82.5% |
| 6cl5A01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 37.0 | 4.02e-01 | 94.4% | 90.2% |
| 6l4qB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 34.0 | 3.31e-01 | 84.0% | 59.3% |
| 2dm4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 34.0 | 3.73e-01 | 72.8% | 85.1% |
| 1wf5A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 3.80e-01 | 96.8% | 76.9% |
| 6hyfA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 36.0 | 3.85e-01 | 92.0% | 84.9% |
| 3b1bA01 | 3.10.200.10 | Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase | 0.51 | 39.0 | 3.05e-01 | 83.2% | 52.3% |
| 5utkA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 32.0 | 3.61e-01 | 70.4% | 86.7% |
| 3utoB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 33.0 | 3.61e-01 | 74.4% | 82.0% |
| 2qqkA02 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.50 | 32.0 | 3.38e-01 | 84.0% | 69.6% |
| 4pbxA05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 34.0 | 3.67e-01 | 91.2% | 86.0% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3488003 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.83 | 55.0 | 6.65e-01 | 71.2% | 100.0% |
| 3332862 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.79 | 53.0 | 6.00e-01 | 88.8% | 89.5% |
| 199114 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.77 | 53.0 | 5.64e-01 | 76.8% | 79.5% |
| 3252937 | 1.1.7.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH | 0.76 | 56.0 | 6.12e-01 | 76.0% | 100.0% |
| 4952899 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 44.0 | 5.40e-01 | 71.2% | 96.2% |
| 3250056 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 49.0 | 4.97e-01 | 72.0% | 91.2% |
| 3975132 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 41.0 | 4.79e-01 | 70.4% | 81.1% |
| 3247934 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.69 | 48.0 | 5.40e-01 | 71.2% | 100.0% |
| 3291083 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.69 | 48.0 | 5.59e-01 | 94.4% | 100.0% |
| 5057694 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.68 | 47.0 | 5.24e-01 | 71.2% | 98.0% |
| 3788350 | 1.1.7.99 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1, FAD_binding_6 | 0.68 | 47.0 | 4.51e-01 | 70.4% | 79.3% |
| 4942656 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.68 | 47.0 | 5.21e-01 | 71.2% | 100.0% |
| 2455725 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.67 | 46.0 | 5.01e-01 | 70.4% | 94.3% |
| 3187684 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.67 | 46.0 | 4.44e-01 | 71.2% | 76.6% |
| 3668360 | 1.1.7.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase | 0.67 | 50.0 | 4.88e-01 | 77.6% | 95.6% |
| 1877632 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.67 | 47.0 | 5.09e-01 | 71.2% | 97.1% |
| 3355332 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.67 | 46.0 | 4.23e-01 | 71.2% | 70.3% |
| 4931402 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 47.0 | 4.96e-01 | 72.0% | 84.5% |
| 3594165 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 46.0 | 4.18e-01 | 72.0% | 67.6% |
| 4939996 | 1.1.7.46 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B | 0.66 | 47.0 | 5.06e-01 | 72.0% | 90.5% |
| 4551806 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.66 | 46.0 | 5.09e-01 | 72.0% | 98.0% |
| 109 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 46.0 | 5.01e-01 | 71.2% | 98.0% |
| 4984467 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.65 | 45.0 | 5.07e-01 | 71.2% | 94.7% |
| 3305089 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.65 | 47.0 | 4.41e-01 | 75.2% | 79.4% |
| 3731972 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.65 | 46.0 | 4.56e-01 | 72.0% | 83.8% |
| 3442209 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.65 | 46.0 | 4.80e-01 | 72.8% | 98.3% |
| 3268887 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 45.0 | 4.91e-01 | 70.4% | 91.0% |
| 3636460 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.65 | 47.0 | 3.20e-01 | 74.4% | 26.7% |
| 4413294 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.64 | 44.0 | 4.94e-01 | 70.4% | 97.9% |
| 4946423 | 1.1.7.138 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › NAD_binding_1 | 0.64 | 47.0 | 5.12e-01 | 93.6% | 95.0% |
| 4249659 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.63 | 44.0 | 4.91e-01 | 71.2% | 98.9% |
| 4542543 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.63 | 51.0 | 5.37e-01 | 94.4% | 96.4% |
| 3786133 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.63 | 44.0 | 4.89e-01 | 72.8% | 98.0% |
| 3613252 | 1.1.7.99 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1, FAD_binding_6 | 0.63 | 46.0 | 4.49e-01 | 75.2% | 80.7% |
| 4477675 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.63 | 49.0 | 5.29e-01 | 94.4% | 98.1% |
| 4012802 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 46.0 | 4.84e-01 | 75.2% | 98.2% |
| 4946798 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 47.0 | 5.13e-01 | 92.0% | 98.0% |
| 4978554 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 46.0 | 5.07e-01 | 87.2% | 97.0% |
| 3788725 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.62 | 45.0 | 4.78e-01 | 75.2% | 94.5% |
| 3951894 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.62 | 43.0 | 4.80e-01 | 70.4% | 97.9% |
| 3708173 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.62 | 46.0 | 4.38e-01 | 76.8% | 75.9% |
| 4032542 | 2.2.1.6 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › SSL_OB | 0.61 | 32.0 | 3.76e-01 | 74.4% | 71.8% |
| 3186464 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.60 | 45.0 | 4.38e-01 | 76.8% | 78.5% |
| 5069410 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.59 | 37.0 | 3.22e-01 | 93.6% | 39.5% |
| 3739461 | 1.1.7.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_1 | 0.59 | 41.0 | 2.97e-01 | 72.8% | 29.2% |
| 3699180 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.57 | 46.0 | 4.64e-01 | 87.2% | 85.6% |
| 3405187 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.56 | 40.0 | 4.25e-01 | 73.6% | 83.6% |
| 3369214 | 1.1.7.46 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B | 0.56 | 46.0 | 4.94e-01 | 92.8% | 99.1% |
| 3617125 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.56 | 45.0 | 4.16e-01 | 87.2% | 74.5% |
| 4211588 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 47.0 | 3.23e-01 | 92.8% | 57.2% |
| 3226149 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 47.0 | 4.93e-01 | 96.8% | 100.0% |
| 4627066 | 1.1.7.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Dna2_Rift | 0.55 | 47.0 | 4.94e-01 | 96.8% | 100.0% |
| 3061149 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.54 | 37.0 | 3.99e-01 | 74.4% | 83.2% |
| 3904531 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 34.0 | 3.71e-01 | 92.0% | 81.0% |
| 1547 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.52 | 37.0 | 3.95e-01 | 96.8% | 86.1% |
| 3867707 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 34.0 | 3.57e-01 | 73.6% | 73.9% |
| 3185246 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 31.0 | 3.06e-01 | 84.0% | 56.2% |
| 1553 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.50 | 32.0 | 3.50e-01 | 74.4% | 77.7% |
| 3909333 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.50 | 32.0 | 3.59e-01 | 95.2% | 86.7% |
| 141846 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.50 | 32.0 | 2.77e-01 | 93.6% | 38.8% |