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IMGVR_UViG_3300025480_000181-3300025480-Ga0208688_100029035
Arc-VirIMGVR_UViG_3300025480_000181-3300025480-Ga0208688_100029035
Identity
- Kingdom:
- archaea
Quality
70.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-89
Domain cluster:
rep: NC_004664.2__NP_813735.1__phiBT1p44__00044__D2-76
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ra8A01 | 2.20.140.10 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain | 0.80 | 62.0 | 6.57e-01 | 84.7% | 93.2% |
| 2bs6A01 | 2.40.128.190 | Mainly Beta › Beta Barrel › Lipocalin › | 0.67 | 43.0 | 4.34e-01 | 72.9% | 65.5% |
| 8hpoK01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.62 | 48.0 | 3.05e-01 | 82.4% | 54.9% |
| 3mcpA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 45.0 | 4.08e-01 | 76.5% | 97.3% |
| 1okjB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.61 | 51.0 | 4.46e-01 | 90.6% | 98.4% |
| 1nkgA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.61 | 43.0 | 3.10e-01 | 74.1% | 31.1% |
| 4csdB00 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.60 | 52.0 | 3.69e-01 | 97.6% | 91.4% |
| 2acaA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.60 | 52.0 | 4.12e-01 | 96.5% | 50.6% |
| 2zgoA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 51.0 | 4.11e-01 | 95.3% | 58.7% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 37.0 | 3.16e-01 | 70.6% | 37.9% |
| 2gfgA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.59 | 49.0 | 3.81e-01 | 92.9% | 57.6% |
| 3t0pA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.58 | 38.0 | 2.94e-01 | 80.0% | 29.0% |
| 2r0hA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 49.0 | 4.05e-01 | 94.1% | 60.6% |
| 3cjmA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 43.0 | 3.15e-01 | 80.0% | 73.7% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 44.0 | 3.76e-01 | 80.0% | 97.8% |
| 6c1zA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 44.0 | 3.72e-01 | 80.0% | 94.2% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 44.0 | 3.85e-01 | 80.0% | 97.6% |
| 3mnmA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.58 | 42.0 | 3.84e-01 | 75.3% | 94.6% |
| 2wkkA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 49.0 | 4.10e-01 | 94.1% | 62.0% |
| 1xksA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 49.0 | 3.29e-01 | 98.8% | 84.2% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 47.0 | 3.17e-01 | 90.6% | 83.2% |
| 4ffgA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 48.0 | 3.33e-01 | 97.6% | 84.7% |
| 5kolD00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.56 | 38.0 | 3.08e-01 | 70.6% | 76.2% |
| 1ealA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 44.0 | 3.86e-01 | 84.7% | 98.4% |
| 1dhkB00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 47.0 | 3.63e-01 | 94.1% | 67.7% |
| 3ei3A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 49.0 | 3.32e-01 | 100.0% | 85.4% |
| 1fx5B00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 49.0 | 3.53e-01 | 97.6% | 71.1% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.55 | 49.0 | 4.03e-01 | 98.8% | 85.7% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.54 | 39.0 | 3.32e-01 | 75.3% | 90.7% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.54 | 45.0 | 4.13e-01 | 92.9% | 85.1% |
| 4ufcA01 | 2.70.98.50 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans | 0.54 | 37.0 | 2.54e-01 | 72.9% | 98.2% |
| 2qm4A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.53 | 39.0 | 3.33e-01 | 77.6% | 56.6% |
| 1aj6A00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.53 | 42.0 | 3.21e-01 | 84.7% | 78.4% |
| 2mqdA00 | 3.30.1460.60 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 40.0 | 3.61e-01 | 82.4% | 95.0% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.52 | 46.0 | 3.72e-01 | 98.8% | 90.4% |
| 1s14B00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.52 | 42.0 | 3.31e-01 | 85.9% | 80.9% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.52 | 45.0 | 3.84e-01 | 98.8% | 93.8% |
| 2ywqA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.52 | 36.0 | 3.61e-01 | 72.9% | 75.0% |
| 6j9eJ00 | 3.30.160.560 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 36.0 | 3.94e-01 | 80.0% | 93.9% |
| 1b9vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.52 | 43.0 | 2.89e-01 | 96.5% | 67.4% |
| 3zl8A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.52 | 42.0 | 3.15e-01 | 90.6% | 79.2% |
| 7z0sE02 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.51 | 38.0 | 2.68e-01 | 81.2% | 40.4% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.51 | 44.0 | 3.53e-01 | 98.8% | 92.7% |
| 4qdiA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.50 | 40.0 | 3.06e-01 | 90.6% | 79.0% |
| 2ddmB00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 41.0 | 2.97e-01 | 92.9% | 60.9% |
| 3htvA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 41.0 | 3.81e-01 | 91.8% | 73.0% |
| 4bubA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.50 | 40.0 | 3.03e-01 | 90.6% | 69.6% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1034013 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.80 | 62.0 | 6.43e-01 | 84.7% | 88.5% |
| 5022798 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.76 | 44.0 | 2.69e-01 | 72.9% | 10.0% |
| 3233005 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.69 | 53.0 | 3.73e-01 | 90.6% | 27.5% |
| 3355563 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.68 | 42.0 | 2.64e-01 | 72.9% | 11.7% |
| 3242741 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.66 | 54.0 | 3.78e-01 | 89.4% | 28.5% |
| 3474457 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.65 | 42.0 | 4.11e-01 | 72.9% | 58.9% |
| 3546198 | 5.1.4.149 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR54 | 0.64 | 56.0 | 3.75e-01 | 97.6% | 85.3% |
| 3739528 | 5.1.3.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Hira | 0.64 | 44.0 | 3.27e-01 | 71.8% | 43.4% |
| 3991351 | 220.1.1.4 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 | 0.63 | 41.0 | 3.42e-01 | 70.6% | 39.3% |
| 4985112 | 868.1.1.1 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › CYTH | 0.63 | 54.0 | 4.26e-01 | 96.5% | 54.4% |
| None | — | 0.62 | 55.0 | 3.66e-01 | 97.6% | 85.9% | |
| 3735753 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 43.0 | 2.46e-01 | 72.9% | 12.9% |
| 4971822 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 50.0 | 3.94e-01 | 88.2% | 88.6% |
| 3387142 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 51.0 | 3.93e-01 | 91.8% | 52.1% |
| 3500237 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.59 | 48.0 | 4.01e-01 | 88.2% | 59.3% |
| 3710553 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 51.0 | 4.33e-01 | 96.5% | 98.6% |
| 3281112 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.58 | 43.0 | 3.87e-01 | 78.8% | 80.0% |
| 2438877 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.58 | 44.0 | 3.72e-01 | 80.0% | 94.2% |
| 3929846 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 50.0 | 3.42e-01 | 96.5% | 70.1% |
| 3286484 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.57 | 41.0 | 2.75e-01 | 76.5% | 90.4% |
| 4180585 | 7520.1.1.1 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA | 0.56 | 38.0 | 3.22e-01 | 70.6% | 77.3% |
| 3602202 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.56 | 50.0 | 3.82e-01 | 97.6% | 67.4% |
| 3485287 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.56 | 47.0 | 3.61e-01 | 94.1% | 53.7% |
| 4069893 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.56 | 42.0 | 3.72e-01 | 80.0% | 76.8% |
| 3387958 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.55 | 48.0 | 3.96e-01 | 96.5% | 54.8% |
| 4029923 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.55 | 46.0 | 3.44e-01 | 92.9% | 64.0% |
| 4945471 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 37.0 | 4.04e-01 | 80.0% | 90.8% |
| 3280283 | 4019.1.1.1 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase | 0.54 | 40.0 | 2.70e-01 | 78.8% | 86.8% |
| 1140096 | 5.1.3.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › YqgU | 0.54 | 47.0 | 3.23e-01 | 100.0% | 96.0% |
| 4017127 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 44.0 | 3.15e-01 | 92.9% | 84.3% |
| 4977909 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.54 | 37.0 | 3.45e-01 | 72.9% | 90.0% |
| 3627561 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 44.0 | 3.69e-01 | 90.6% | 86.0% |
| 3728206 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.53 | 46.0 | 3.13e-01 | 100.0% | 62.3% |
| 4027049 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.53 | 42.0 | 3.00e-01 | 84.7% | 71.8% |
| 4128856 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.52 | 41.0 | 3.06e-01 | 84.7% | 64.1% |
| 3688914 | 283.1.1.4 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › ThrE | 0.52 | 36.0 | 3.10e-01 | 72.9% | 46.4% |
| 5014023 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.52 | 41.0 | 3.31e-01 | 89.4% | 71.7% |
| 3458876 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.51 | 42.0 | 3.07e-01 | 91.8% | 82.0% |
| 3514491 | 5.1.4.242 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N | 0.51 | 44.0 | 2.90e-01 | 97.6% | 58.5% |
| 5039218 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.51 | 40.0 | 3.53e-01 | 84.7% | 98.5% |
| 3461881 | 223.2.1.15 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin | 0.51 | 40.0 | 3.65e-01 | 89.4% | 83.2% |
| 3436093 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 36.0 | 3.76e-01 | 74.1% | 93.3% |
| 3519032 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 38.0 | 3.67e-01 | 81.2% | 75.0% |
| 5025341 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.50 | 35.0 | 3.35e-01 | 71.8% | 76.0% |
| 4932637 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.50 | 34.0 | 3.37e-01 | 70.6% | 78.9% |