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IMGVR_UViG_3300025480_000181-3300025480-Ga0208688_100029059
Arc-VirIMGVR_UViG_3300025480_000181-3300025480-Ga0208688_100029059
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-185
Domain cluster:
rep: IMGVR_UViG_7000000171_000112-7000000171-SRS052697_LANL_scaffold_75554__gene_171382__D9-163
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nnnC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 37.0 | 4.19e-01 | 93.6% | 79.5% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 38.0 | 3.93e-01 | 80.1% | 67.9% |
| 3gkuA03 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.56 | 25.0 | 3.62e-01 | 85.4% | 95.8% |
| 2anrA02 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.53 | 25.0 | 3.54e-01 | 70.2% | 98.7% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.51 | 29.0 | 3.40e-01 | 70.8% | 79.7% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4940657 | 101.1.2.269 ↗ | alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea | 0.84 | 73.0 | 7.48e-01 | 95.9% | 94.5% |
| 4996617 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 60.0 | 6.90e-01 | 83.6% | 100.0% |
| 4943285 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 62.0 | 6.91e-01 | 80.1% | 100.0% |
| 5064968 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 59.0 | 6.79e-01 | 78.4% | 100.0% |
| 3964088 | 101.1.2.269 ↗ | alpha arrays › HTH › HTH › winged helix domain › SocA_Panacea | 0.77 | 69.0 | 6.78e-01 | 93.0% | 90.0% |
| 4969597 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 61.0 | 6.57e-01 | 100.0% | 100.0% |
| 5011607 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 59.0 | 6.50e-01 | 97.1% | 100.0% |
| 5006976 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 56.0 | 5.79e-01 | 99.4% | 90.2% |
| 4961487 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 41.0 | 4.88e-01 | 97.1% | 90.4% |
| 3285931 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 32.0 | 3.74e-01 | 87.1% | 80.9% |
| 5017294 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.54 | 26.0 | 3.67e-01 | 70.2% | 100.0% |
| 3521725 | 327.11.2.55 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF26774 | 0.52 | 25.0 | 3.41e-01 | 70.2% | 90.6% |