←Back to structures
IMGVR_UViG_3300025488_000457-3300025488-Ga0209141_10022481
Arc-VirIMGVR_UViG_3300025488_000457-3300025488-Ga0209141_10022481
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-91
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00109__D10-111
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00574.29 best | CLP_protease | 59.6 | 5.40e-16 | 100.0% | 50.0% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5e0sB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.94 | 90.0 | 6.66e-01 | 100.0% | 46.3% |
| 1y7oB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.92 | 79.0 | 6.07e-01 | 100.0% | 44.9% |
| 7ekqA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.92 | 87.0 | 6.57e-01 | 100.0% | 47.9% |
| 7ekoK01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.90 | 85.0 | 6.23e-01 | 100.0% | 43.4% |
| 7ekoN01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.89 | 84.0 | 6.44e-01 | 100.0% | 50.0% |
| 7ekoI01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.89 | 83.0 | 6.18e-01 | 100.0% | 44.7% |
| 4jcqA00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.87 | 76.0 | 6.02e-01 | 100.0% | 48.8% |
| 4gm2A00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.85 | 79.0 | 6.10e-01 | 100.0% | 50.3% |
| 5o34C00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.79 | 59.0 | 4.52e-01 | 100.0% | 36.2% |
| 4nnqC01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.78 | 58.0 | 4.70e-01 | 100.0% | 42.3% |
| 3rrvC00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.78 | 59.0 | 4.22e-01 | 100.0% | 28.9% |
| 2vx2A01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 58.0 | 4.42e-01 | 100.0% | 35.7% |
| 5c9gF01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.77 | 58.0 | 4.42e-01 | 100.0% | 35.1% |
| 1dciA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.76 | 58.0 | 4.36e-01 | 100.0% | 34.4% |
| 4og1A01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.76 | 57.0 | 4.38e-01 | 100.0% | 36.2% |
| 3gkbA00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.75 | 58.0 | 4.06e-01 | 100.0% | 27.0% |
| 3oc7A01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.74 | 56.0 | 4.40e-01 | 100.0% | 39.7% |
| 3sllB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.74 | 56.0 | 4.31e-01 | 100.0% | 36.1% |
| 4k3wA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.73 | 55.0 | 4.21e-01 | 100.0% | 34.8% |
| 3pihA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.52 | 29.0 | 3.24e-01 | 93.3% | 69.4% |
| 1g2nA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.51 | 43.0 | 3.18e-01 | 93.3% | 73.6% |
| 4wczC01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.51 | 44.0 | 3.51e-01 | 98.9% | 98.0% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4127180 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.97 | 93.0 | 6.92e-01 | 100.0% | 46.7% |
| 4029606 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.96 | 93.0 | 6.65e-01 | 100.0% | 41.4% |
| 3448952 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.96 | 92.0 | 6.72e-01 | 100.0% | 44.4% |
| 4129382 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.95 | 91.0 | 6.93e-01 | 100.0% | 49.2% |
| 4149588 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.95 | 91.0 | 6.63e-01 | 100.0% | 43.3% |
| 4208822 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.95 | 91.0 | 6.68e-01 | 100.0% | 44.4% |
| 4082850 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.95 | 91.0 | 6.33e-01 | 100.0% | 37.1% |
| 3646775 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.94 | 91.0 | 6.52e-01 | 100.0% | 42.5% |
| 4123638 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.94 | 90.0 | 6.59e-01 | 100.0% | 43.3% |
| 4876908 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.94 | 90.0 | 6.91e-01 | 100.0% | 51.4% |
| 4469638 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.94 | 90.0 | 6.72e-01 | 100.0% | 46.7% |
| 2794363 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.94 | 90.0 | 7.37e-01 | 100.0% | 61.5% |
| 3958161 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.93 | 88.0 | 6.36e-01 | 100.0% | 40.5% |
| 4023841 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.93 | 89.0 | 6.70e-01 | 100.0% | 48.4% |
| 3449037 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.93 | 89.0 | 6.30e-01 | 100.0% | 39.1% |
| 4445600 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.93 | 89.0 | 6.42e-01 | 100.0% | 43.3% |
| 4812887 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.92 | 87.0 | 6.44e-01 | 100.0% | 45.0% |
| 4489618 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.91 | 85.0 | 6.48e-01 | 100.0% | 48.9% |
| 3977155 | 2486.1.1.19 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, SDH_protease | 0.90 | 84.0 | 6.15e-01 | 100.0% | 41.4% |
| 3978000 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.90 | 84.0 | 6.19e-01 | 100.0% | 42.4% |
| 3650309 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.90 | 85.0 | 6.20e-01 | 100.0% | 42.8% |
| 3590105 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.90 | 83.0 | 6.38e-01 | 100.0% | 48.1% |
| 2794365 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.89 | 83.0 | 6.10e-01 | 100.0% | 42.9% |
| 3970789 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.87 | 82.0 | 6.37e-01 | 100.0% | 52.2% |
| 3328582 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.84 | 79.0 | 5.73e-01 | 100.0% | 46.7% |
| 4335500 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.83 | 77.0 | 5.54e-01 | 100.0% | 41.3% |
| 3575975 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.81 | 74.0 | 5.72e-01 | 96.7% | 48.9% |
| 4007097 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.81 | 74.0 | 4.40e-01 | 100.0% | 18.9% |
| 5043511 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.80 | 73.0 | 5.21e-01 | 100.0% | 46.3% |
| 3273502 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.80 | 73.0 | 4.40e-01 | 100.0% | 21.8% |
| 3959028 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.80 | 73.0 | 4.83e-01 | 100.0% | 35.3% |
| 139506 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.78 | 59.0 | 4.16e-01 | 100.0% | 27.4% |
| 4935462 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.78 | 71.0 | 5.11e-01 | 100.0% | 48.2% |
| 3791475 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.78 | 73.0 | 5.89e-01 | 100.0% | 88.7% |
| 3303920 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.78 | 70.0 | 5.01e-01 | 100.0% | 46.2% |
| 4986604 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.78 | 71.0 | 5.07e-01 | 100.0% | 42.0% |
| 4990878 | 2486.1.1.2 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease | 0.78 | 70.0 | 5.31e-01 | 100.0% | 51.9% |
| 3324560 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.78 | 70.0 | 5.34e-01 | 100.0% | 49.3% |
| 4934553 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.78 | 70.0 | 5.03e-01 | 100.0% | 41.2% |
| 4259068 | 2486.1.1.14 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 | 0.77 | 70.0 | 4.20e-01 | 100.0% | 20.0% |
| 3839857 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.77 | 70.0 | 4.98e-01 | 100.0% | 45.8% |
| 5042373 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.77 | 69.0 | 5.01e-01 | 100.0% | 48.6% |
| 4131089 | 2486.1.1.14 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 | 0.76 | 69.0 | 5.03e-01 | 100.0% | 49.6% |
| 5012787 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.76 | 68.0 | 4.93e-01 | 100.0% | 47.2% |
| 4522150 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.75 | 67.0 | 4.65e-01 | 100.0% | 40.0% |
| 4356494 | 2486.1.1.14 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › CLP_protease, Peptidase_S49 | 0.75 | 67.0 | 4.71e-01 | 100.0% | 42.1% |
| 4963775 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.74 | 67.0 | 4.76e-01 | 100.0% | 44.9% |
| 3979334 | 2486.1.1.5 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49 | 0.74 | 66.0 | 4.84e-01 | 100.0% | 49.2% |
| 5024925 | 2486.1.1.17 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N | 0.72 | 61.0 | 4.74e-01 | 100.0% | 43.1% |
| 4299578 | 2486.1.1.13 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Peptidase_S49+Peptidase_S49_N | 0.71 | 63.0 | 4.61e-01 | 100.0% | 47.8% |
| 5032586 | 2486.1.1.17 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N | 0.70 | 59.0 | 4.22e-01 | 100.0% | 31.1% |
| 5019448 | 2486.1.1.17 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N | 0.70 | 61.0 | 4.48e-01 | 100.0% | 37.0% |
| 3968025 | 2486.1.1.17 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N | 0.69 | 62.0 | 4.60e-01 | 100.0% | 42.7% |
| 5064223 | 2486.1.1.17 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › NfeD1b_N | 0.66 | 57.0 | 4.36e-01 | 100.0% | 40.5% |
| 5077855 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.53 | 41.0 | 3.21e-01 | 82.2% | 69.5% |
| 3393175 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.51 | 45.0 | 3.27e-01 | 98.9% | 74.3% |
| 4999379 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.50 | 39.0 | 3.33e-01 | 82.2% | 98.7% |