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IMGVR_UViG_3300025498_000138-3300025498-Ga0208819_10022649
Arc-VirIMGVR_UViG_3300025498_000138-3300025498-Ga0208819_10022649
Identity
- Kingdom:
- archaea
Quality
54.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 180-221
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2j5iA02 | 6.10.250.2850 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.86 | 69.0 | 7.21e-01 | 88.1% | 97.4% |
| 4jvtA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.83 | 71.0 | 7.21e-01 | 92.9% | 95.1% |
| 3l3sA02 | 1.10.287.2460 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.81 | 60.0 | 6.40e-01 | 88.1% | 94.4% |
| 4qfeK02 | 1.10.287.2460 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.80 | 57.0 | 5.99e-01 | 76.2% | 97.1% |
| 2hw5A02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.78 | 62.0 | 5.67e-01 | 90.5% | 66.7% |
| 3sllA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.77 | 61.0 | 5.53e-01 | 92.9% | 98.4% |
| 3qkaE02 | 1.10.287.2460 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 59.0 | 5.90e-01 | 88.1% | 86.0% |
| 3nrwA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.74 | 60.0 | 4.65e-01 | 97.6% | 47.1% |
| 4hkaA02 | 1.10.287.3810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.72 | 61.0 | 5.78e-01 | 97.6% | 88.2% |
| 6j9eD01 | 1.10.274.100 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 | 0.69 | 59.0 | 4.18e-01 | 95.2% | 96.1% |
| 3g3oA00 | 3.20.100.30 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain | 0.67 | 55.0 | 3.42e-01 | 100.0% | 18.1% |
| 2xkoC02 | 6.10.250.870 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 51.0 | 5.30e-01 | 85.7% | 100.0% |
| 2psmA00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.64 | 56.0 | 4.08e-01 | 100.0% | 63.2% |
| 2kw3C00 | 6.10.290.30 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › Regulatory factor X-associated C-terminal binding domain | 0.64 | 51.0 | 4.55e-01 | 90.5% | 69.4% |
| 2qvaA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.63 | 53.0 | 4.95e-01 | 97.6% | 83.0% |
| 1puzA00 | 1.10.150.250 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Flavinator of succinate dehydrogenase | 0.59 | 45.0 | 3.93e-01 | 100.0% | 50.0% |
| 5mmiJ02 | 1.10.10.250 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain | 0.57 | 48.0 | 4.14e-01 | 97.6% | 62.3% |
| 4ga4A01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.54 | 45.0 | 3.91e-01 | 97.6% | 58.2% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5008692 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.99 | 93.0 | 6.54e-01 | 100.0% | 38.2% |
| 3687434 | 108.1.1.46 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › Caleosin | 0.87 | 78.0 | 5.75e-01 | 100.0% | 42.9% |
| 3593450 | 101.17.1.4 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › HU-CCDC81_euk_2 | 0.86 | 64.0 | 4.03e-01 | 81.0% | 17.0% |
| 3810712 | 108.1.1.46 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › Caleosin | 0.83 | 71.0 | 5.43e-01 | 100.0% | 46.0% |
| 3651143 | 108.1.1.46 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › Caleosin | 0.83 | 72.0 | 5.07e-01 | 100.0% | 35.4% |
| 3730639 | 108.1.1.46 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › Caleosin | 0.80 | 69.0 | 4.82e-01 | 100.0% | 32.9% |
| 5051613 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.77 | 60.0 | 4.36e-01 | 90.5% | 31.4% |
| 3969925 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.75 | 65.0 | 3.86e-01 | 97.6% | 38.0% |
| 3875067 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.75 | 65.0 | 4.29e-01 | 97.6% | 26.5% |
| 4192176 | 230.3.1.1 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS | 0.74 | 57.0 | 4.04e-01 | 88.1% | 26.4% |
| 3479094 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.74 | 63.0 | 3.90e-01 | 97.6% | 18.4% |
| 3290070 | 5011.1.1.0 ↗ | extended segments › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa › Bacterial ba3 type cytochrome c oxidase subunit IIa | 0.73 | 59.0 | 5.40e-01 | 90.5% | 100.0% |
| 3708600 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.70 | 60.0 | 3.38e-01 | 100.0% | 45.7% |
| 3269066 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.70 | 56.0 | 4.08e-01 | 95.2% | 56.0% |
| 3512231 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.69 | 50.0 | 5.21e-01 | 88.1% | 97.1% |
| 3947229 | 7573.1.1.0 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like | 0.69 | 58.0 | 3.84e-01 | 100.0% | 21.6% |
| 3180974 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 57.0 | 5.35e-01 | 97.6% | 78.2% |
| 3527434 | 6006.1.1.6 ↗ | extended segments › Voltage gated calcium channel IQ domain › Voltage gated calcium channel IQ domain › Voltage gated calcium channel IQ domain › PF27661 | 0.66 | 57.0 | 3.85e-01 | 97.6% | 29.0% |
| 4624218 | 301.6.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like | 0.64 | 50.0 | 3.44e-01 | 95.2% | 23.4% |