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IMGVR_UViG_3300025501_000049-3300025501-Ga0208563_10057751

Arc-Vir

IMGVR_UViG_3300025501_000049-3300025501-Ga0208563_10057751

Quality

80.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-102
PDB
D2 medium residues 103-191
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2au3A02 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.77 69.0 5.97e-01 93.3% 85.8%
4edgA01 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.72 65.0 5.62e-01 96.6% 88.8%
5tgnA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 40.0 3.73e-01 85.4% 60.6%
3ecfA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 43.0 3.81e-01 100.0% 60.9%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 39.0 3.29e-01 79.8% 81.3%
4dloB01 4.10.1240.10 Few Secondary Structures › Irregular › Hormone receptor fold › GPCR, family 2, extracellular hormone receptor domain 0.51 29.0 3.25e-01 76.4% 72.7%
1t82A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 36.0 3.18e-01 75.3% 81.7%
3cqnB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 40.0 3.40e-01 89.9% 97.5%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1407259 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.77 69.0 6.00e-01 93.3% 87.2%
4099289 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.76 68.0 5.83e-01 93.3% 84.6%
4157635 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.74 67.0 5.90e-01 96.6% 91.2%
3978060 4023.1.1.3 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DUF7146 0.64 54.0 5.25e-01 96.6% 84.0%
3831707 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.55 38.0 2.58e-01 71.9% 22.0%
3707978 5.1.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.52 37.0 2.93e-01 74.2% 49.2%
3593024 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.52 40.0 3.71e-01 95.5% 64.3%
3803140 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 35.0 3.25e-01 74.2% 53.9%
3763123 5.1.4.371 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Frtz 0.51 38.0 2.49e-01 79.8% 21.9%
None 0.51 35.0 2.36e-01 70.8% 34.2%
5013525 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.51 40.0 3.58e-01 84.3% 88.8%
3625014 216.1.1.16 a+b two layers › UBC-like › UBC-like › UBC-like › Med27 0.50 36.0 2.94e-01 75.3% 58.8%
D3 medium residues 192-344
PDB
Pfam (3)
AccessionNameScoreE-valueQ covHMM cov
PF13155.13 best Toprim_2 32.0 1.80e-07 64.7% 94.3%
PF01751.29 Toprim 32.9 8.50e-08 60.1% 84.4%
PF13662.13 Toprim_4 44.3 2.40e-11 56.9% 85.5%
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5gujA02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.84 67.0 7.40e-01 90.8% 100.0%
2au3A03 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.83 65.0 7.26e-01 90.2% 100.0%
1q57G02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.83 66.0 7.29e-01 93.5% 100.0%
1t6t200 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.80 49.0 5.80e-01 70.6% 85.5%
2fcjB00 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.80 53.0 6.04e-01 79.7% 87.3%
5vazA02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.80 65.0 7.05e-01 90.8% 100.0%
1sulB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 52.0 4.86e-01 85.6% 93.8%
5w56B02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.64 46.0 4.95e-01 81.0% 87.5%
1pq4A01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.64 49.0 4.92e-01 81.0% 79.6%
6bs3B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 47.0 3.72e-01 77.1% 97.1%
2ozlB02 3.40.50.920 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 51.0 5.45e-01 89.5% 99.3%
3ujpB01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.62 46.0 4.72e-01 79.1% 79.1%
3ibtA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 53.0 4.87e-01 90.2% 96.9%
2wj6A01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 54.0 4.93e-01 93.5% 95.6%
3wydA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 52.0 4.81e-01 89.5% 99.0%
1gtkA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.62 29.0 3.52e-01 93.5% 65.0%
1ihuA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 46.0 3.91e-01 76.5% 92.7%
3hh8A01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.60 47.0 4.76e-01 81.0% 88.6%
2ehdA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 47.0 4.29e-01 83.0% 97.1%
3i0zA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.59 45.0 4.32e-01 79.1% 71.6%
7tjbA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.59 49.0 4.45e-01 88.9% 76.7%
4dz4A00 3.40.800.10 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain 0.59 47.0 3.76e-01 85.6% 87.9%
3cx3B01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.59 44.0 4.47e-01 80.4% 78.6%
7yiyA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.59 45.0 3.83e-01 79.7% 59.4%
3lhlA00 3.40.800.10 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain 0.58 46.0 3.82e-01 83.7% 97.1%
3lucA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 45.0 4.82e-01 82.4% 95.3%
1rqeA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 41.0 3.37e-01 98.7% 38.7%
2f9wA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.58 44.0 4.76e-01 80.4% 100.0%
1r6hA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.58 37.0 3.57e-01 85.0% 56.4%
5t3uB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.58 42.0 4.51e-01 81.7% 87.2%
4impA02 3.40.50.11460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 46.0 4.17e-01 85.6% 86.7%
6gwuD00 3.40.1050.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase 0.58 46.0 4.22e-01 85.0% 80.7%
1pdoA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.57 42.0 4.50e-01 80.4% 89.1%
3mtqB00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.57 43.0 4.52e-01 81.7% 86.9%
5g4kA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 48.0 4.03e-01 91.5% 67.8%
3mc3A00 3.40.1260.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like 0.56 37.0 4.11e-01 88.2% 84.3%
3ogzA01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.55 44.0 3.14e-01 83.7% 29.1%
7e6iA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 43.0 4.17e-01 82.4% 94.9%
2q02A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.55 44.0 3.68e-01 85.6% 62.1%
3n0xA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 43.0 4.19e-01 85.6% 75.6%
1ujnA01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 38.0 3.82e-01 71.2% 81.4%
2v6fA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 46.0 3.51e-01 90.8% 52.7%
2p62A01 3.40.50.10620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PH0156-like domains 0.55 42.0 4.28e-01 80.4% 100.0%
3wy7A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.55 40.0 3.50e-01 76.5% 61.7%
2zc0A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.54 41.0 3.65e-01 80.4% 64.2%
1ou0A00 3.40.50.10230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase 0.54 41.0 3.84e-01 79.1% 72.6%
5f2kB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 40.0 3.60e-01 93.5% 55.1%
1eucB03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.54 44.0 4.57e-01 89.5% 95.2%
4lpsA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 41.0 3.76e-01 84.3% 78.6%
3k40A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.53 41.0 3.40e-01 81.0% 53.4%
2eklA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 39.0 4.29e-01 81.7% 97.5%
1pvdA03 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.52 41.0 3.77e-01 83.7% 77.5%
2o3jB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 42.0 3.81e-01 85.6% 98.1%
3lkbA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 41.0 3.69e-01 83.7% 95.8%
4lflA00 3.40.1400.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribose 5-phosphate Isomerase B; Chain: A, › Sugar-phosphate isomerase, RpiB/LacA/LacB 0.51 40.0 4.21e-01 84.3% 99.3%
2csuA03 3.40.50.261 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains 0.51 40.0 3.93e-01 81.7% 91.0%
4mcjG00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 41.0 4.17e-01 86.3% 94.2%
1jqkA02 3.40.50.2030 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 42.0 4.14e-01 88.9% 85.2%
3gnlA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 41.0 4.02e-01 85.6% 89.7%
2qw5A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.51 42.0 3.30e-01 88.9% 69.7%
2uz1A03 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.51 40.0 3.75e-01 83.7% 81.2%
6denA03 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.51 40.0 3.54e-01 83.7% 67.5%
2e7jA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.51 39.0 3.40e-01 80.4% 60.3%
1on4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.51 36.0 3.50e-01 79.1% 64.4%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4078805 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.86 68.0 7.54e-01 94.8% 100.0%
4345684 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.85 65.0 7.30e-01 88.2% 100.0%
4675929 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.84 67.0 7.35e-01 90.8% 100.0%
4504313 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.83 66.0 7.34e-01 90.8% 100.0%
4041525 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.83 64.0 7.19e-01 86.9% 100.0%
4191035 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.83 66.0 7.26e-01 89.5% 100.0%
1930939 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.83 67.0 7.29e-01 94.1% 98.5%
3519195 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.82 63.0 7.05e-01 89.5% 100.0%
4305698 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.82 65.0 7.18e-01 90.2% 100.0%
4429071 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.82 65.0 6.90e-01 91.5% 92.6%
1407540 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.82 64.0 7.11e-01 89.5% 100.0%
4426393 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.81 67.0 7.21e-01 92.2% 100.0%
3510844 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.81 62.0 6.96e-01 88.2% 100.0%
4441825 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.81 64.0 7.08e-01 89.5% 100.0%
3509953 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.81 57.0 6.61e-01 95.4% 100.0%
4114168 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.80 63.0 6.98e-01 88.2% 100.0%
3833262 2006.1.3.7 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.79 71.0 7.10e-01 92.8% 93.5%
3966687 2006.1.3.7 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.79 65.0 7.04e-01 91.5% 100.0%
3807885 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.79 72.0 4.98e-01 94.8% 34.3%
4622340 2006.1.3.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.79 55.0 5.96e-01 83.7% 83.8%
4023806 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.77 66.0 6.78e-01 88.9% 100.0%
3285475 2006.1.3.7 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 0.76 64.0 6.83e-01 92.2% 100.0%
4507511 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.76 69.0 6.33e-01 94.1% 92.6%
3740636 2006.1.3.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › TOP6A-Spo11_Toprim 0.73 57.0 5.53e-01 81.0% 98.2%
3588209 2006.1.3.6 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 0.72 56.0 5.82e-01 79.7% 100.0%
3655189 2006.1.3.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim 0.72 52.0 5.97e-01 83.0% 98.3%
3386969 2006.1.3.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain 0.67 54.0 4.74e-01 85.6% 97.8%
5053391 2496.1.1.0 a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like 0.66 43.0 4.66e-01 94.1% 78.4%
3588666 7579.1.1.89 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase, BD-FAE 0.65 56.0 4.38e-01 94.1% 90.9%
4011360 7516.1.1.0 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases 0.65 37.0 3.21e-01 81.7% 36.1%
3592364 2010.1.1.0 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain 0.64 57.0 5.18e-01 95.4% 87.0%
4637998 2007.2.2.7 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › DUF2325 0.64 40.0 4.82e-01 79.1% 100.0%
3695492 2010.1.1.2 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › Dak1 0.63 56.0 4.96e-01 95.4% 82.7%
5012303 2003.1.6.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like 0.63 48.0 4.89e-01 79.1% 96.7%
3224182 2007.1.4.9 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › Pacs-1 0.63 53.0 5.13e-01 90.2% 100.0%
4951431 2007.1.14.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro 0.62 42.0 4.48e-01 82.4% 77.8%
3726987 7590.1.1.7 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › MID_MedPIWI 0.62 49.0 4.27e-01 82.4% 68.7%
3220658 2007.5.1.0 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase 0.62 54.0 4.88e-01 93.5% 98.5%
4657416 2006.1.3.8 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4,RecR_C 0.62 45.0 5.16e-01 81.7% 99.1%
3926208 2010.1.1.2 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › Dak1 0.62 55.0 5.19e-01 95.4% 95.0%
4978456 2004.1.1.67 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CbiA 0.61 47.0 3.91e-01 80.4% 99.2%
5077947 7592.1.1.0 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.61 34.0 3.91e-01 83.7% 73.0%
3947905 2010.1.1.3 a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man 0.60 43.0 4.70e-01 81.0% 89.6%
5051721 2007.2.1.3 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › FMN_red 0.60 46.0 4.34e-01 79.7% 96.8%
4330242 2004.1.1.201 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 0.60 46.0 4.06e-01 79.7% 98.2%
5083520 2007.3.1.0 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.60 41.0 4.61e-01 98.7% 91.3%
3500810 2008.1.1.68 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PND 0.60 36.0 3.97e-01 83.0% 74.2%
4984746 7592.1.1.0 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.59 46.0 4.10e-01 81.7% 67.9%
4506173 2007.2.1.3 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › FMN_red 0.58 46.0 4.11e-01 85.0% 88.6%
4971828 7592.1.1.6 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N 0.57 42.0 4.36e-01 85.0% 82.1%
3500868 2006.1.1.9 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › UMPH-1 0.57 45.0 3.54e-01 81.7% 84.5%
4015676 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.57 45.0 4.21e-01 83.7% 100.0%
391008 2003.6.1.5 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin 0.57 43.0 3.50e-01 78.4% 96.2%
3390996 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.57 46.0 4.20e-01 85.6% 81.5%
3598365 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.56 49.0 4.01e-01 94.8% 58.6%
3704556 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.55 50.0 4.00e-01 97.4% 61.4%
3723345 7574.1.1.5 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C 0.55 44.0 3.83e-01 83.7% 72.6%
4970456 2005.1.1.22 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › QueH 0.55 41.0 3.82e-01 77.8% 91.3%
3226093 300.1.1.11 a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 0.54 47.0 4.28e-01 93.5% 87.5%
3487186 2007.1.2.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.54 45.0 3.73e-01 91.5% 98.9%
4598878 7582.1.1.2 a/b three-layered sandwiches › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › Rossmann-like domain in CbiD › PF29030 0.54 45.0 4.40e-01 90.2% 100.0%
5002555 2004.1.1.88 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › cobW 0.53 41.0 3.87e-01 82.4% 89.4%
5013075 2004.1.1.1200 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF835 0.53 38.0 3.97e-01 85.0% 79.2%
3904535 2007.9.1.1 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR 0.53 41.0 4.05e-01 82.4% 86.7%
3720761 2484.1.1.153 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1744 0.53 41.0 3.27e-01 82.4% 57.1%
3289920 7574.1.1.5 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C 0.52 41.0 3.76e-01 83.7% 77.1%
2756921 7574.1.1.5 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C 0.51 41.0 3.61e-01 84.3% 68.6%
4976955 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.51 46.0 3.81e-01 96.7% 56.2%
2321486 2007.15.1.4 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › Nuc_deoxyri_tr2 0.51 41.0 4.19e-01 86.3% 94.0%
1123011 7560.1.1.1 a/b three-layered sandwiches › Ribose/Galactose isomerase RpiB/AlsB › Ribose/Galactose isomerase RpiB/AlsB › Ribose/Galactose isomerase RpiB/AlsB › LacAB_rpiB 0.51 41.0 4.22e-01 85.0% 99.3%
3955319 7574.1.1.5 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C 0.51 40.0 3.74e-01 83.7% 80.5%
3413049 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.50 40.0 3.16e-01 83.7% 51.1%
3943823 7574.1.1.5 a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › TPP_enzyme_C 0.50 39.0 3.52e-01 83.7% 69.5%
D4 medium residues 345-405
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6j5tB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 35.0 2.89e-01 70.5% 100.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3282697 601.1.2.128 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › PF27075, PF27076 0.52 36.0 2.34e-01 72.1% 30.4%
D5 medium residues 406-548
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03796.22 best DnaB_C 43.4 4.10e-11 98.6% 52.2%
CATH (90)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cr2A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.81 77.0 6.31e-01 100.0% 61.9%
3uhjC01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.72 47.0 4.61e-01 95.1% 61.8%
3jzmA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 67.0 5.47e-01 100.0% 77.0%
4yo7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.71 46.0 4.83e-01 89.5% 71.5%
4yleA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 47.0 4.80e-01 90.2% 70.8%
8ouzD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 64.0 5.40e-01 100.0% 69.9%
4tl8F00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 65.0 5.52e-01 100.0% 66.2%
8gjaD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 64.0 5.07e-01 100.0% 53.3%
8db3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 62.0 5.43e-01 100.0% 66.8%
4kq9A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.68 45.0 5.26e-01 90.9% 96.9%
1nlfA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 62.0 5.08e-01 98.6% 57.5%
8gj8A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 62.0 5.11e-01 100.0% 70.0%
1ivnA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.67 54.0 4.98e-01 90.9% 68.0%
4o5aA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.66 48.0 4.91e-01 95.1% 77.0%
3hl0A01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.66 45.0 4.34e-01 95.1% 61.6%
1szpB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 60.0 5.26e-01 100.0% 70.1%
3ngxA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.64 38.0 4.71e-01 83.2% 98.8%
3hs3A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 44.0 4.56e-01 95.1% 75.4%
7br2D01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.61 56.0 4.84e-01 98.6% 80.2%
3mw8A01 3.40.50.10090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 38.0 4.10e-01 93.0% 76.1%
2l69A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 44.0 4.58e-01 88.1% 81.3%
4impA02 3.40.50.11460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 48.0 4.28e-01 98.6% 58.8%
5g4kA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 52.0 4.28e-01 99.3% 81.4%
3svtA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 52.0 4.20e-01 98.6% 78.1%
1xg5B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 51.0 4.32e-01 98.6% 99.6%
3u49D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 50.0 4.24e-01 95.8% 99.2%
6znpA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 52.0 4.57e-01 100.0% 72.6%
2lciA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 42.0 4.36e-01 88.8% 81.3%
3qp9D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 51.0 3.54e-01 96.5% 91.2%
1yb1B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 52.0 4.40e-01 100.0% 86.4%
2amlA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.57 42.0 4.16e-01 96.5% 74.1%
3pvzB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 52.0 4.07e-01 100.0% 56.3%
3afmB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 51.0 4.37e-01 100.0% 99.6%
3oidC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 51.0 4.28e-01 100.0% 73.0%
3pk0D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 50.0 4.16e-01 98.6% 99.6%
4bmvI00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 51.0 4.23e-01 100.0% 72.0%
3rotA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 47.0 4.88e-01 100.0% 94.9%
1qnrA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.56 49.0 3.75e-01 96.5% 95.6%
7xexC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 49.0 4.42e-01 96.5% 78.7%
3ksuB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 50.0 4.32e-01 97.9% 99.6%
5l3sB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 51.0 4.48e-01 100.0% 99.0%
4e3zB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 50.0 4.33e-01 99.3% 99.6%
5thqA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 50.0 4.19e-01 99.3% 99.2%
2mr5A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.56 41.0 4.26e-01 88.1% 81.6%
5ktkA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 50.0 3.56e-01 100.0% 42.7%
1c4oA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 44.0 4.14e-01 95.1% 68.6%
4n03A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 46.0 4.33e-01 100.0% 72.7%
4z0tA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 49.0 4.16e-01 98.6% 95.9%
3wtbC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 50.0 4.22e-01 100.0% 74.9%
5dcaA09 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 50.0 4.41e-01 99.3% 74.3%
5ilgB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 49.0 4.08e-01 98.6% 93.4%
4lvuA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 49.0 4.08e-01 98.6% 98.0%
3tscA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 50.0 4.04e-01 100.0% 91.5%
1g0nB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 49.0 4.07e-01 98.6% 93.3%
6pznB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 49.0 4.17e-01 100.0% 92.5%
6s8oB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 49.0 4.34e-01 99.3% 75.9%
4iuyA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 49.0 4.09e-01 100.0% 97.6%
3h6gA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 46.0 4.39e-01 96.5% 78.0%
2bd0A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 48.0 4.12e-01 97.2% 99.1%
4nimA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 49.0 4.15e-01 99.3% 95.0%
3o38B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 49.0 4.14e-01 99.3% 96.2%
4da9B00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 49.0 4.27e-01 100.0% 89.4%
1m32A02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.54 50.0 4.12e-01 100.0% 72.8%
2eyqA04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 44.0 3.71e-01 95.8% 51.0%
4rkrD02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 45.0 4.56e-01 100.0% 88.9%
4iiuC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 48.0 4.10e-01 100.0% 75.4%
3ausA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 49.0 4.01e-01 100.0% 71.0%
4rgbA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 48.0 3.91e-01 100.0% 90.9%
4zjpA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 45.0 4.53e-01 100.0% 89.6%
1h5qA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 47.0 3.93e-01 98.6% 97.7%
3vzpC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 46.0 3.95e-01 97.2% 98.4%
3pxxD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 47.0 3.85e-01 99.3% 98.9%
1wp9A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 43.0 4.26e-01 95.8% 82.6%
3o03A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 47.0 3.94e-01 99.3% 95.7%
1n7kA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 44.0 3.75e-01 89.5% 80.3%
1w6uD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 46.0 3.78e-01 98.6% 86.9%
4xfkA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 46.0 4.02e-01 95.8% 100.0%
1usgA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 47.0 4.17e-01 96.5% 100.0%
4yacA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 47.0 4.04e-01 100.0% 100.0%
2l82A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 43.0 4.18e-01 88.8% 84.6%
4kzpB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.52 46.0 3.72e-01 97.9% 100.0%
1o9gA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 47.0 4.17e-01 100.0% 74.3%
1yjsA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.52 47.0 3.92e-01 100.0% 68.5%
6bogA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 42.0 3.70e-01 95.1% 59.3%
1dnpA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.51 41.0 4.30e-01 92.3% 95.4%
3o26A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 46.0 3.65e-01 100.0% 84.0%
3tb6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.51 44.0 4.53e-01 94.4% 100.0%
4nl4H03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 47.0 4.19e-01 100.0% 74.0%
1lvlA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 43.0 3.80e-01 94.4% 80.6%
4y9tA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 44.0 4.43e-01 96.5% 93.1%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3274280 2004.1.1.200 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 0.89 84.0 6.49e-01 100.0% 50.5%
2988376 2004.1.1.200 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 0.89 80.0 6.58e-01 100.0% 56.2%
4575830 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.88 84.0 5.74e-01 100.0% 34.3%
4291905 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.88 84.0 6.37e-01 100.0% 50.0%
4548850 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 83.0 5.70e-01 100.0% 34.2%
3589232 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.85 81.0 5.59e-01 100.0% 34.9%
3965288 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.85 81.0 5.62e-01 100.0% 34.8%
3964521 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.85 81.0 6.44e-01 100.0% 55.1%
3962909 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.85 81.0 6.05e-01 100.0% 46.9%
4214084 507.1.1.1 alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB 0.85 81.0 5.55e-01 100.0% 34.5%
4194684 507.1.1.6 alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB_C 0.85 81.0 5.45e-01 100.0% 33.5%
None 0.85 81.0 5.57e-01 100.0% 35.3%
3940178 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.84 80.0 6.14e-01 100.0% 51.5%
4994098 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.82 68.0 5.67e-01 100.0% 52.8%
3649232 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.82 77.0 5.88e-01 100.0% 49.4%
4989677 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.82 56.0 5.18e-01 95.1% 56.6%
5057343 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.81 67.0 5.56e-01 100.0% 53.0%
5072980 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.80 69.0 5.72e-01 100.0% 54.5%
3510702 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.80 76.0 6.15e-01 100.0% 64.4%
4940321 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.76 70.0 5.70e-01 100.0% 56.7%
4994273 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.76 73.0 5.86e-01 100.0% 62.0%
5007497 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.75 72.0 5.57e-01 100.0% 60.7%
4967485 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.75 72.0 5.80e-01 100.0% 63.3%
4960054 2004.1.1.200 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 0.74 70.0 5.53e-01 100.0% 53.6%
5067656 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.74 71.0 5.56e-01 100.0% 73.3%
5001907 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.74 69.0 5.73e-01 100.0% 60.5%
5031272 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.73 69.0 5.67e-01 100.0% 68.6%
4947475 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.73 70.0 5.74e-01 100.0% 66.0%
5028594 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.73 69.0 5.86e-01 100.0% 67.7%
5045504 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.72 68.0 5.61e-01 100.0% 68.8%
5056111 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.72 68.0 5.63e-01 100.0% 60.9%
3412811 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 67.0 5.64e-01 100.0% 78.3%
5076246 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.72 68.0 5.50e-01 100.0% 81.2%
4991830 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.71 60.0 5.37e-01 100.0% 65.3%
5031877 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.71 68.0 5.68e-01 100.0% 67.6%
5040727 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.71 67.0 5.50e-01 100.0% 61.2%
4989685 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.71 67.0 5.36e-01 100.0% 60.0%
4437580 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.71 67.0 5.44e-01 100.0% 76.4%
135757 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.71 67.0 5.33e-01 100.0% 72.3%
5040728 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.71 67.0 5.58e-01 100.0% 82.2%
4975916 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.71 67.0 5.50e-01 100.0% 65.0%
5056515 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.71 67.0 5.46e-01 100.0% 70.6%
5068832 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.70 65.0 5.58e-01 100.0% 65.1%
4964530 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.70 67.0 5.37e-01 100.0% 60.8%
5002228 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.70 66.0 5.55e-01 100.0% 69.1%
5036457 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.70 66.0 5.35e-01 100.0% 65.6%
5055709 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.70 66.0 5.58e-01 100.0% 66.2%
3714446 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.70 66.0 4.95e-01 100.0% 65.2%
5002551 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.70 66.0 5.40e-01 100.0% 71.0%
4991600 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 61.0 5.35e-01 100.0% 65.3%
5007980 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.70 65.0 5.47e-01 100.0% 62.7%
4988482 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.70 66.0 5.60e-01 100.0% 70.0%
5027855 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.69 66.0 5.29e-01 100.0% 61.6%
5072524 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.69 65.0 5.30e-01 100.0% 70.0%
3027313 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.69 62.0 5.00e-01 100.0% 53.4%
None 0.68 64.0 5.05e-01 100.0% 65.1%
5067718 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.68 64.0 5.45e-01 100.0% 68.2%
3457573 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.68 63.0 4.98e-01 100.0% 62.7%
102166 2004.1.1.200 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_25 0.68 62.0 5.08e-01 98.6% 57.5%
None 0.68 63.0 4.95e-01 100.0% 62.7%
4962866 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.68 63.0 5.35e-01 100.0% 63.1%
3516066 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.68 63.0 4.91e-01 100.0% 65.9%
5013929 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.67 63.0 5.31e-01 100.0% 67.8%
3499216 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 63.0 5.04e-01 100.0% 64.9%
5077271 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.67 63.0 5.30e-01 100.0% 69.6%
5012533 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.67 64.0 5.37e-01 100.0% 64.6%
3635232 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 62.0 4.83e-01 100.0% 71.5%
4964686 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.67 63.0 5.17e-01 100.0% 64.2%
3983672 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.66 54.0 4.93e-01 91.6% 65.4%
5012532 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.66 62.0 5.27e-01 100.0% 69.5%
4942206 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 61.0 5.44e-01 100.0% 73.8%
4960600 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.64 60.0 4.95e-01 100.0% 68.3%
3801703 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 60.0 5.13e-01 100.0% 71.2%
4624410 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.63 53.0 4.81e-01 93.0% 65.6%
4978751 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 57.0 5.09e-01 100.0% 84.0%
3291200 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.59 54.0 4.63e-01 99.3% 72.0%
3951127 2007.5.1.8 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.59 53.0 4.55e-01 97.9% 70.2%
3604555 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.59 53.0 4.47e-01 99.3% 71.7%
5073009 2007.3.1.6 a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 0.59 51.0 4.84e-01 94.4% 78.8%
5048628 2004.1.1.85 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase 0.58 50.0 3.84e-01 93.7% 92.4%
3276940 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.57 51.0 3.96e-01 96.5% 77.4%
4996175 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.57 52.0 4.07e-01 100.0% 51.7%
3615132 2004.1.1.535 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Utp25_C, UTP25_NTPase-like 0.57 51.0 3.31e-01 96.5% 38.9%
3952612 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.57 51.0 4.28e-01 100.0% 73.1%
4955651 2003.1.1.69 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 0.57 51.0 4.16e-01 99.3% 91.4%
4966137 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.56 51.0 4.31e-01 100.0% 67.7%
3273695 2003.1.1.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.55 49.0 3.99e-01 97.9% 84.8%
3404309 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 50.0 3.32e-01 100.0% 59.0%
4621613 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 45.0 3.63e-01 95.1% 46.6%
4877150 2003.1.1.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.55 48.0 4.19e-01 97.2% 98.2%
5046552 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.55 50.0 4.28e-01 100.0% 74.7%
3211161 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.54 45.0 4.34e-01 88.8% 90.6%
3583171 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.53 43.0 4.11e-01 91.6% 75.8%
5047918 7592.1.1.0 a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains 0.52 40.0 4.18e-01 88.8% 88.5%
3797404 2007.15.1.0 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase 0.51 41.0 3.96e-01 86.0% 76.4%
D6 medium residues 549-576_591-631
PDB
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bh0A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.84 75.0 4.79e-01 95.7% 23.9%
4a1fB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 70.0 4.44e-01 95.7% 33.6%
3ewaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 64.0 4.22e-01 91.3% 84.7%
8gjaD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 61.0 4.01e-01 91.3% 84.4%
4tl8F00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 53.0 3.79e-01 94.2% 29.1%
4be3A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 51.0 3.39e-01 98.6% 53.8%
2gzsA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 43.0 2.98e-01 79.7% 34.9%
3tdgA01 3.10.450.520 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 40.0 4.12e-01 73.9% 75.8%
2wozA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.58 49.0 3.32e-01 100.0% 77.2%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 36.0 3.56e-01 71.0% 59.2%
2rs7A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 38.0 3.75e-01 71.0% 68.9%
3sc7X01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 47.0 3.10e-01 100.0% 93.8%
4k08A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 37.0 3.00e-01 71.0% 38.2%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 38.0 3.04e-01 92.8% 32.3%
1l3aA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.55 45.0 3.45e-01 100.0% 38.0%
3obqA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.55 44.0 3.57e-01 91.3% 69.5%
2f2hA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 39.0 3.37e-01 75.4% 59.6%
3cqyA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 44.0 3.29e-01 91.3% 71.7%
4h61A00 3.10.450.580 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mediator complex, subunit Med6 0.54 41.0 3.35e-01 84.1% 74.5%
2l3tA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 43.0 3.89e-01 92.8% 63.0%
3s6pA03 2.60.270.70 Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › 0.54 42.0 3.33e-01 85.5% 71.1%
2kxgA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 44.0 4.06e-01 94.2% 84.2%
2pgeA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 36.0 3.10e-01 72.5% 90.6%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 41.0 2.81e-01 84.1% 46.5%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 45.0 3.51e-01 95.7% 42.0%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.53 42.0 3.40e-01 91.3% 58.6%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 42.0 3.36e-01 91.3% 43.8%
4ghbA00 2.40.160.190 Mainly Beta › Beta Barrel › Porin › 0.52 42.0 2.98e-01 94.2% 25.5%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.52 41.0 3.40e-01 89.9% 91.9%
2ezvA01 3.40.600.40 Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › Type II restriction enzyme SfiI, multifunctional domain 0.50 40.0 3.02e-01 91.3% 62.9%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4548850 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.93 75.0 4.46e-01 91.3% 13.7%
4575830 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.92 80.0 4.74e-01 97.1% 14.5%
4200873 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.89 77.0 4.56e-01 91.3% 16.0%
4291905 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.88 78.0 4.95e-01 94.2% 22.3%
3962909 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.87 76.0 4.76e-01 92.8% 20.9%
3589232 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 77.0 4.58e-01 94.2% 17.9%
4055517 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.87 77.0 4.55e-01 95.7% 18.1%
None 0.86 81.0 4.74e-01 100.0% 15.4%
4311187 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.86 79.0 5.00e-01 98.6% 30.7%
3979830 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.85 80.0 4.72e-01 100.0% 15.4%
4194684 507.1.1.6 alpha arrays › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB helicase N-terminal domain-related › DnaB_C 0.85 76.0 4.47e-01 95.7% 16.0%
4522132 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.84 79.0 4.66e-01 100.0% 15.6%
3965288 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 78.0 4.65e-01 100.0% 16.7%
3964521 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.83 77.0 5.05e-01 100.0% 26.4%
None 0.83 64.0 3.81e-01 89.9% 13.2%
2554159 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.82 77.0 4.89e-01 100.0% 24.0%
4157830 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.77 67.0 4.33e-01 92.8% 85.3%
None 0.77 67.0 4.32e-01 92.8% 85.3%
5065571 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.76 71.0 4.57e-01 100.0% 77.1%
3499216 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 68.0 4.40e-01 95.7% 80.4%
1497950 2004.1.1.107 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C 0.75 68.0 4.34e-01 100.0% 33.1%
3243390 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.75 63.0 4.07e-01 89.9% 76.4%
5023029 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.74 63.0 4.14e-01 89.9% 80.8%
3401822 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.74 67.0 4.38e-01 98.6% 80.7%
3516066 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.73 62.0 4.00e-01 91.3% 82.1%
3601734 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 62.0 3.99e-01 92.8% 83.3%
4946309 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.72 66.0 4.35e-01 98.6% 82.2%
3887555 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.72 66.0 4.25e-01 100.0% 82.4%
3714446 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.72 65.0 4.13e-01 98.6% 91.5%
3803189 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.72 65.0 4.21e-01 100.0% 86.6%
3596382 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.71 60.0 3.83e-01 89.9% 81.3%
3264373 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.71 65.0 4.18e-01 100.0% 85.8%
5008124 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.68 55.0 3.85e-01 92.8% 27.7%
5073480 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.68 57.0 3.90e-01 94.2% 88.4%
5013748 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 53.0 3.80e-01 87.0% 31.2%
5078443 2004.1.1.790 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GvpD_P-loop 0.66 56.0 3.86e-01 92.8% 84.4%
3908434 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.66 55.0 3.66e-01 95.7% 86.7%
4971258 2004.1.1.790 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GvpD_P-loop 0.64 55.0 3.85e-01 95.7% 87.1%
3852953 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 53.0 3.68e-01 92.8% 27.1%
5082169 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.62 56.0 3.91e-01 100.0% 91.8%
5020938 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.62 52.0 3.61e-01 92.8% 87.6%
5027855 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.62 53.0 3.63e-01 100.0% 26.3%
5018155 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.62 52.0 3.60e-01 94.2% 85.0%
5082366 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.61 52.0 3.64e-01 95.7% 87.8%
5028870 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.61 41.0 4.13e-01 71.0% 68.6%
4388251 5.1.4.35 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase 0.60 51.0 3.27e-01 95.7% 83.1%
5003678 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.60 53.0 3.61e-01 100.0% 88.8%
4945226 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.60 53.0 3.48e-01 100.0% 68.7%
4938373 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.60 51.0 3.60e-01 100.0% 87.7%
4000395 2007.1.1.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.59 43.0 3.09e-01 100.0% 25.2%
3635821 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.59 43.0 2.96e-01 78.3% 51.9%
4996906 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.59 50.0 3.52e-01 100.0% 88.5%
5053359 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 41.0 3.96e-01 78.3% 63.7%
4990097 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.58 50.0 3.43e-01 100.0% 90.2%
5032125 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 41.0 2.76e-01 78.3% 25.8%
3819309 330.1.1.5 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM 0.55 38.0 3.62e-01 71.0% 67.1%
5044002 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 47.0 3.35e-01 100.0% 88.3%
4010956 5.1.4.332 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29748 0.54 44.0 2.82e-01 92.8% 36.0%
3928293 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 37.0 3.24e-01 75.4% 47.0%
4930368 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.53 36.0 3.16e-01 72.5% 60.0%
4027492 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 42.0 2.94e-01 95.7% 65.2%
3786702 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.52 39.0 2.51e-01 84.1% 36.6%
3618787 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.52 39.0 3.41e-01 82.6% 87.3%
3275758 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.52 42.0 2.61e-01 95.7% 26.8%
5046054 223.1.1.14 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.52 40.0 3.44e-01 87.0% 50.8%
3582164 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 38.0 2.61e-01 95.7% 19.3%
4518553 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.51 39.0 3.34e-01 85.5% 49.2%