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IMGVR_UViG_3300025545_000234-3300025545-Ga0209142_100079826
Arc-VirIMGVR_UViG_3300025545_000234-3300025545-Ga0209142_100079826
Identity
- Kingdom:
- archaea
Quality
78.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-82
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1idpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 51.0 | 4.15e-01 | 84.0% | 98.6% |
| 2pn2A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.64 | 48.0 | 4.04e-01 | 82.7% | 51.1% |
| 4mh4A02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.62 | 44.0 | 4.18e-01 | 77.3% | 64.9% |
| 4g7xB00 | 3.30.1150.10 | Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › | 0.61 | 43.0 | 3.88e-01 | 80.0% | 53.9% |
| 2k3iA01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 38.0 | 3.66e-01 | 73.3% | 56.5% |
| 4afkA00 | 2.40.160.100 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 44.0 | 2.81e-01 | 84.0% | 30.5% |
| 1tx3D00 | 3.40.600.10 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II | 0.56 | 47.0 | 3.29e-01 | 92.0% | 73.4% |
| 2cpiA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 36.0 | 3.54e-01 | 70.7% | 59.3% |
| 2ql8A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.55 | 46.0 | 3.89e-01 | 98.7% | 75.7% |
| 1cx8A01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.55 | 46.0 | 3.18e-01 | 100.0% | 79.2% |
| 2raqA01 | 3.30.70.1340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain | 0.54 | 32.0 | 3.11e-01 | 76.0% | 49.4% |
| 1gpcA00 | 3.90.198.10 | Alpha Beta › Alpha-Beta Complex › Replication Fork Single-Stranded DNA Binding Protein › Replication Fork Single-Stranded Dna Binding Protein | 0.54 | 45.0 | 3.34e-01 | 96.0% | 81.7% |
| 1ilvA00 | 3.40.1210.10 | Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase | 0.53 | 42.0 | 2.99e-01 | 88.0% | 41.6% |
| 8sppA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 45.0 | 2.99e-01 | 100.0% | 61.5% |
| 2bpa200 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 35.0 | 2.73e-01 | 70.7% | 64.6% |
| 1fwxA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 2.75e-01 | 100.0% | 52.7% |
| 2vf9A00 | 3.30.380.10 | Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein | 0.51 | 42.0 | 3.67e-01 | 100.0% | 77.9% |
| 3i2nA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 43.0 | 2.86e-01 | 100.0% | 38.3% |
| 3hm2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.50 | 37.0 | 2.87e-01 | 78.7% | 100.0% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.50 | 43.0 | 3.36e-01 | 100.0% | 58.7% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5075397 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.65 | 49.0 | 4.16e-01 | 81.3% | 56.0% |
| 5047206 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.65 | 50.0 | 4.01e-01 | 84.0% | 48.7% |
| 5070602 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.64 | 49.0 | 4.02e-01 | 84.0% | 50.7% |
| 4845314 | 206.1.3.14 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSH_synth_ATP | 0.63 | 53.0 | 3.90e-01 | 93.3% | 73.1% |
| 5008504 | 7575.1.1.2 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C25 | 0.63 | 47.0 | 3.34e-01 | 81.3% | 88.5% |
| 5075107 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.62 | 47.0 | 3.94e-01 | 84.0% | 51.4% |
| 5076659 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.61 | 47.0 | 3.88e-01 | 84.0% | 50.7% |
| 152223 | 272.1.1.2 ↗ | a+b two layers › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA/TonB C-terminal domain › TolA | 0.61 | 43.0 | 3.88e-01 | 80.0% | 53.9% |
| 5045913 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.61 | 46.0 | 3.82e-01 | 84.0% | 49.7% |
| 5074340 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.59 | 45.0 | 3.74e-01 | 84.0% | 50.0% |
| 5056801 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.56 | 42.0 | 3.66e-01 | 84.0% | 56.0% |
| 4013195 | 206.1.3.14 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSH_synth_ATP | 0.56 | 48.0 | 3.81e-01 | 100.0% | 62.4% |
| 2320781 | 206.1.3.14 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GSH_synth_ATP | 0.56 | 45.0 | 3.46e-01 | 94.7% | 66.5% |
| 3271185 | 304.12.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MBTP1_N | 0.56 | 38.0 | 3.60e-01 | 72.0% | 60.0% |
| 3959373 | 206.1.3.2 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › GARS_A | 0.56 | 45.0 | 3.86e-01 | 92.0% | 58.5% |
| 5057963 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.56 | 46.0 | 3.72e-01 | 92.0% | 69.7% |
| 4076048 | 2492.1.1.4 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.54 | 45.0 | 3.34e-01 | 94.7% | 56.2% |
| 3433417 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.54 | 45.0 | 4.07e-01 | 93.3% | 85.7% |
| 3508049 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.53 | 44.0 | 3.63e-01 | 98.7% | 89.7% |
| 3590542 | 235.1.1.10 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glucosaminidase | 0.53 | 44.0 | 3.58e-01 | 98.7% | 89.4% |
| 4497101 | 4312.2.1.0 ↗ | a+b two layers › RelE-like › YaeB-like › YaeB-like | 0.50 | 35.0 | 3.39e-01 | 74.7% | 98.9% |