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IMGVR_UViG_3300025584_000384-3300025584-Ga0209774_10067225
Arc-VirIMGVR_UViG_3300025584_000384-3300025584-Ga0209774_10067225
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-133
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 34.0 | 4.33e-01 | 81.1% | 76.2% |
| 3go5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 41.0 | 4.71e-01 | 99.1% | 82.3% |
| 4jbjA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 43.0 | 4.35e-01 | 100.0% | 67.3% |
| 7q5yB01 | 3.30.460.80 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit | 0.64 | 38.0 | 3.78e-01 | 73.9% | 54.2% |
| 5gqoA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 44.0 | 4.66e-01 | 100.0% | 80.4% |
| 6ro0D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 49.0 | 4.99e-01 | 100.0% | 86.4% |
| 2k5vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 42.0 | 4.39e-01 | 100.0% | 78.6% |
| 2cwaA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 43.0 | 4.42e-01 | 100.0% | 75.2% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 47.0 | 4.79e-01 | 100.0% | 84.5% |
| 3ulbA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 33.0 | 3.83e-01 | 77.5% | 72.3% |
| 3kojB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 42.0 | 4.60e-01 | 100.0% | 90.0% |
| 1pfsA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 40.0 | 4.55e-01 | 100.0% | 96.2% |
| 8aa9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 43.0 | 4.29e-01 | 100.0% | 73.7% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.59 | 37.0 | 4.38e-01 | 100.0% | 93.2% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.59 | 26.0 | 3.76e-01 | 86.5% | 93.8% |
| 2hqlA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 43.0 | 4.66e-01 | 100.0% | 94.5% |
| 2k50A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 42.0 | 4.31e-01 | 100.0% | 79.8% |
| 4bs9A05 | 3.30.160.660 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 35.0 | 3.55e-01 | 93.7% | 59.6% |
| 7b9cA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 39.0 | 2.71e-01 | 72.1% | 92.6% |
| 3f1zI00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 49.0 | 4.87e-01 | 100.0% | 93.1% |
| 1i7dA03 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.55 | 43.0 | 3.97e-01 | 87.4% | 64.5% |
| 2konA00 | 3.30.160.350 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 36.0 | 4.03e-01 | 96.4% | 89.0% |
| 3q0xA01 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.54 | 46.0 | 4.14e-01 | 94.6% | 86.5% |
| 8c5yA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 48.0 | 4.18e-01 | 100.0% | 80.0% |
| 5c94A00 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.52 | 37.0 | 3.74e-01 | 74.8% | 91.4% |
| 4fvaC00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.52 | 40.0 | 3.16e-01 | 82.9% | 100.0% |
| 2ebkA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.50 | 36.0 | 3.48e-01 | 74.8% | 82.0% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5074611 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.73 | 49.0 | 5.76e-01 | 100.0% | 95.0% |
| 1954221 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.72 | 46.0 | 5.46e-01 | 100.0% | 94.7% |
| 426155 | 2.24.1.1 ↗ | beta barrels › OB-fold › probable receptor YhhM › probable receptor YhhM › DUF2500 | 0.70 | 42.0 | 5.00e-01 | 100.0% | 91.5% |
| 4128017 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 45.0 | 4.25e-01 | 100.0% | 55.6% |
| 4547854 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 49.0 | 4.95e-01 | 100.0% | 76.4% |
| 4956007 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.66 | 43.0 | 4.48e-01 | 86.5% | 70.5% |
| 3590584 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.64 | 46.0 | 4.32e-01 | 88.3% | 60.7% |
| 3226909 | 331.15.1.0 ↗ | a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 | 0.64 | 32.0 | 3.85e-01 | 87.4% | 70.7% |
| 4272864 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.64 | 47.0 | 4.58e-01 | 100.0% | 70.8% |
| 5034364 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.63 | 45.0 | 4.35e-01 | 90.1% | 65.6% |
| 5036293 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 43.0 | 4.57e-01 | 100.0% | 79.0% |
| 5046475 | 2.2.1.0 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins | 0.62 | 49.0 | 4.81e-01 | 100.0% | 77.5% |
| 4929844 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.62 | 47.0 | 5.15e-01 | 100.0% | 97.8% |
| 4937519 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.61 | 46.0 | 4.52e-01 | 100.0% | 73.3% |
| 5037301 | 2.1.1.111 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ssb-like_OB | 0.61 | 42.0 | 4.48e-01 | 100.0% | 84.0% |
| 5005180 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.60 | 44.0 | 4.29e-01 | 90.1% | 68.0% |
| 377 | 2.1.1.90 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › ssDBP | 0.60 | 40.0 | 4.55e-01 | 100.0% | 96.2% |
| 4029815 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 34.0 | 3.22e-01 | 79.3% | 46.9% |
| 3472467 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.60 | 39.0 | 4.68e-01 | 72.1% | 100.0% |
| 4507316 | 220.1.1.20 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH | 0.59 | 35.0 | 3.51e-01 | 76.6% | 56.5% |
| 3598854 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 41.0 | 3.82e-01 | 100.0% | 57.1% |
| 4122961 | 2.1.1.122 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB_1 | 0.58 | 45.0 | 4.73e-01 | 100.0% | 92.0% |
| 4084495 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.58 | 45.0 | 4.59e-01 | 100.0% | 87.6% |
| 4220096 | 2.1.1.48 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C | 0.58 | 34.0 | 4.08e-01 | 100.0% | 96.9% |
| 5028505 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.57 | 40.0 | 3.75e-01 | 100.0% | 57.9% |
| 3735671 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.57 | 36.0 | 3.81e-01 | 94.6% | 71.0% |
| 4873579 | 4019.1.1.3 ↗ | alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.56 | 34.0 | 3.93e-01 | 83.8% | 85.9% |
| 3670182 | 2.1.1.1 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosom_S12_S23 | 0.55 | 37.0 | 3.57e-01 | 90.1% | 60.8% |
| 3172235 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.54 | 40.0 | 2.90e-01 | 80.2% | 93.4% |
| 5020770 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.54 | 35.0 | 3.27e-01 | 73.9% | 51.4% |
| 3881440 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.54 | 44.0 | 4.29e-01 | 88.3% | 92.8% |
| 3619317 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 45.0 | 4.16e-01 | 100.0% | 71.0% |
| 3472797 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.54 | 46.0 | 4.28e-01 | 94.6% | 87.9% |
| 3404941 | 220.1.1.15 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › BBL5 | 0.54 | 37.0 | 3.24e-01 | 71.2% | 92.9% |
| 4020323 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 47.0 | 4.33e-01 | 100.0% | 87.3% |
| 3921426 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.53 | 44.0 | 4.22e-01 | 90.1% | 90.8% |
| 3900401 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.53 | 47.0 | 4.54e-01 | 98.2% | 93.6% |
| 5063726 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 42.0 | 4.42e-01 | 96.4% | 97.0% |
| 3705431 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 45.0 | 4.50e-01 | 100.0% | 93.0% |
| 3762912 | 2.1.1.256 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31101 | 0.51 | 44.0 | 3.76e-01 | 100.0% | 57.3% |
| 3282536 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.51 | 32.0 | 3.64e-01 | 94.6% | 86.3% |
| 3433312 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.51 | 43.0 | 4.12e-01 | 89.2% | 92.0% |
| 3173646 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.51 | 45.0 | 3.99e-01 | 99.1% | 93.3% |
| 3236475 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.50 | 45.0 | 4.23e-01 | 100.0% | 100.0% |