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IMGVR_UViG_3300025584_000578-3300025584-Ga0209774_10043046
Arc-VirIMGVR_UViG_3300025584_000578-3300025584-Ga0209774_10043046
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-81
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.69 | 54.0 | 5.38e-01 | 83.1% | 84.9% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.68 | 49.0 | 3.97e-01 | 76.1% | 68.1% |
| 1h97A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.68 | 57.0 | 4.51e-01 | 93.0% | 66.7% |
| 4ezbA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.67 | 49.0 | 4.15e-01 | 77.5% | 92.3% |
| 3h20A04 | 1.10.1240.50 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.65 | 47.0 | 4.36e-01 | 76.1% | 62.9% |
| 8sorA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.64 | 45.0 | 2.88e-01 | 81.7% | 15.3% |
| 6xpdA01 | 1.20.1510.10 | Mainly Alpha › Up-down Bundle › Alpha-lytic protease prodomain-like › Cation efflux protein transmembrane domain | 0.64 | 45.0 | 3.25e-01 | 74.6% | 69.3% |
| 4fzlA01 | 1.10.150.790 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.63 | 41.0 | 3.88e-01 | 76.1% | 54.0% |
| 4h8aB01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.63 | 41.0 | 4.40e-01 | 73.2% | 80.0% |
| 2og9A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.63 | 48.0 | 4.01e-01 | 100.0% | 46.2% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.62 | 44.0 | 4.00e-01 | 74.6% | 67.4% |
| 3zheA02 | 1.25.40.760 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 45.0 | 3.30e-01 | 80.3% | 33.8% |
| 3ub8A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 45.0 | 3.59e-01 | 81.7% | 80.3% |
| 3go9A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.61 | 45.0 | 3.23e-01 | 80.3% | 59.9% |
| 2pjqA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.60 | 47.0 | 4.40e-01 | 84.5% | 100.0% |
| 5cwhA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.58 | 43.0 | 3.39e-01 | 78.9% | 36.5% |
| 2qffA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 40.0 | 3.99e-01 | 76.1% | 74.3% |
| 2ygwA01 | 1.20.140.90 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain | 0.57 | 44.0 | 3.42e-01 | 83.1% | 63.4% |
| 8ex5A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.57 | 43.0 | 3.18e-01 | 87.3% | 68.9% |
| 8h6rA01 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.55 | 42.0 | 4.01e-01 | 83.1% | 72.9% |
| 3d3yA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.55 | 46.0 | 3.54e-01 | 100.0% | 95.3% |
| 4hojA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 40.0 | 3.62e-01 | 85.9% | 75.7% |
| 1v9dA01 | 1.20.58.630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 37.0 | 3.50e-01 | 100.0% | 62.8% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.50 | 42.0 | 3.78e-01 | 97.2% | 76.6% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4426344 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.69 | 54.0 | 5.48e-01 | 90.1% | 88.2% |
| 4362324 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.68 | 56.0 | 5.85e-01 | 91.5% | 96.9% |
| 4168740 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.66 | 57.0 | 4.32e-01 | 100.0% | 46.1% |
| 4103284 | 6151.1.1.1 ↗ | alpha bundles › Helical bundle domain in S46 peptidase › Helical bundle domain in S46 peptidase › Helical bundle domain in S46 peptidase › Peptidase_S46 | 0.65 | 49.0 | 3.25e-01 | 80.3% | 37.6% |
| 185297 | 6035.1.1.2 ↗ | alpha bundles › Primase helical domain › Primase helical domain › Primase helical domain › RepB_primase_C | 0.65 | 47.0 | 4.36e-01 | 76.1% | 62.9% |
| 5079293 | 1030.1.1.0 ↗ | alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 | 0.64 | 56.0 | 4.68e-01 | 100.0% | 72.0% |
| 3264889 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.63 | 45.0 | 4.30e-01 | 76.1% | 70.6% |
| 4615969 | 150.8.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE | 0.61 | 42.0 | 3.26e-01 | 71.8% | 88.1% |
| 4255610 | 11.1.1.154 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgE_dom_N_S | 0.60 | 44.0 | 3.16e-01 | 80.3% | 26.2% |
| 3968835 | 7558.1.1.1 ↗ | a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Acyltransferase | 0.60 | 44.0 | 3.02e-01 | 81.7% | 42.4% |
| 4061821 | 604.9.1.1 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p | 0.59 | 43.0 | 4.24e-01 | 80.3% | 73.8% |
| 5051921 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.59 | 46.0 | 4.24e-01 | 88.7% | 98.0% |
| 3613271 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 41.0 | 3.47e-01 | 78.9% | 40.8% |
| 3836512 | 592.1.1.2 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › Helicase_PWI | 0.58 | 51.0 | 4.37e-01 | 100.0% | 66.1% |
| 1712010 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 38.0 | 4.22e-01 | 70.4% | 94.3% |
| 4016578 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.56 | 41.0 | 3.61e-01 | 77.5% | 81.9% |
| 4977938 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.56 | 44.0 | 3.46e-01 | 88.7% | 45.6% |
| 3451017 | 604.1.1.242 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › PF28744 | 0.55 | 38.0 | 3.05e-01 | 73.2% | 68.1% |
| 3881611 | 576.1.1.0 ↗ | few secondary structure elements › Tetraspanin extracellular domain › Tetraspanin extracellular domain › Tetraspanin extracellular domain | 0.53 | 38.0 | 3.53e-01 | 77.5% | 60.0% |
| 3764767 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.50 | 41.0 | 3.43e-01 | 93.0% | 96.2% |