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IMGVR_UViG_3300025587_000202-3300025587-Ga0208938_10003781
Arc-VirIMGVR_UViG_3300025587_000202-3300025587-Ga0208938_10003781
Identity
- Kingdom:
- archaea
Quality
84.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-66
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3r4iA02 | 6.10.140.960 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 53.0 | 5.44e-01 | 93.7% | 85.0% |
| 3vibA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 55.0 | 3.88e-01 | 87.3% | 33.7% |
| 1d8cA03 | 1.20.1220.12 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III | 0.66 | 53.0 | 4.25e-01 | 93.7% | 43.0% |
| 1wzoA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.62 | 32.0 | 3.76e-01 | 77.8% | 72.5% |
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.58 | 37.0 | 3.13e-01 | 98.4% | 37.0% |
| 3gpvA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.57 | 41.0 | 3.37e-01 | 95.2% | 42.5% |
| 1yowA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.56 | 46.0 | 3.28e-01 | 100.0% | 60.0% |
| 1pduA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 48.0 | 3.30e-01 | 100.0% | 73.9% |
| 3vkgA11 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.55 | 37.0 | 3.02e-01 | 79.4% | 40.0% |
| 3kbgA03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 35.0 | 3.66e-01 | 95.2% | 73.2% |
| 1m7wA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.52 | 44.0 | 3.11e-01 | 100.0% | 73.5% |
| 3fg2P02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 38.0 | 3.00e-01 | 84.1% | 38.9% |
| 2ppqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 33.0 | 2.91e-01 | 100.0% | 44.7% |
| 2f37A00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.51 | 42.0 | 2.82e-01 | 90.5% | 44.9% |
| 4mndA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.51 | 44.0 | 3.11e-01 | 95.2% | 94.2% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991239 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.75 | 51.0 | 4.45e-01 | 82.5% | 47.4% |
| 3601242 | 616.1.1.35 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › PRA1 | 0.63 | 50.0 | 3.94e-01 | 85.7% | 42.3% |
| 4234516 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.63 | 54.0 | 3.37e-01 | 95.2% | 18.8% |
| 3717089 | 3142.1.1.0 ↗ | alpha arrays › a domain of protein A6KY75 › a domain of protein A6KY75 › a domain of protein A6KY75 | 0.61 | 49.0 | 4.65e-01 | 93.7% | 78.8% |
| 4412642 | 321.1.1.6 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Pup_ligase | 0.61 | 45.0 | 2.81e-01 | 82.5% | 40.0% |
| 4997165 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.60 | 51.0 | 3.19e-01 | 98.4% | 76.1% |
| 3271981 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 40.0 | 3.17e-01 | 81.0% | 32.3% |
| 4189514 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 47.0 | 2.83e-01 | 95.2% | 81.4% |
| 3630551 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.56 | 40.0 | 2.82e-01 | 96.8% | 24.0% |
| 3804658 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.55 | 47.0 | 3.23e-01 | 93.7% | 70.0% |
| 3390758 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.55 | 39.0 | 3.32e-01 | 74.6% | 96.0% |
| 3336371 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 46.0 | 3.46e-01 | 93.7% | 56.1% |
| 3964789 | 331.7.1.1 ↗ | a+b two layers › TBP-like › Cell-division protein ZipA, C-terminal domain › Cell-division protein ZipA, C-terminal domain › ZipA_C | 0.54 | 42.0 | 3.27e-01 | 88.9% | 92.0% |
| 4890967 | 2004.1.1.182 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_8 | 0.54 | 45.0 | 3.26e-01 | 98.4% | 33.5% |
| 3245366 | 101.1.1.10 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ARID | 0.53 | 41.0 | 3.66e-01 | 90.5% | 66.0% |
| None | — | 0.52 | 40.0 | 2.87e-01 | 87.3% | 56.2% | |
| 4319109 | 331.7.1.1 ↗ | a+b two layers › TBP-like › Cell-division protein ZipA, C-terminal domain › Cell-division protein ZipA, C-terminal domain › ZipA_C | 0.51 | 42.0 | 3.21e-01 | 88.9% | 93.7% |
| 3610595 | 3131.1.1.3 ↗ | a+b two layers › FYR domain › FYR domain › FYR domain › FYRC | 0.51 | 36.0 | 2.92e-01 | 77.8% | 89.1% |
| 3249549 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.51 | 44.0 | 2.97e-01 | 100.0% | 48.8% |