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IMGVR_UViG_3300025589_000051-3300025589-Ga0209409_100158916
Arc-VirIMGVR_UViG_3300025589_000051-3300025589-Ga0209409_100158916
Identity
- Kingdom:
- archaea
Quality
90.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-239
Domain cluster:
rep: IMGVR_UViG_3300010239_000028-3300010239-Ga0136451_1000008938__D83-314
D2
high
residues 250-314
Domain cluster:
rep: IMGVR_UViG_3300025587_000202-3300025587-Ga0208938_10003781__D4-66
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09373.16 best | PMBR | 25.1 | 1.90e-05 | 47.7% | 84.9% |
| PF09373.16 | PMBR | 31.7 | 1.50e-07 | 46.2% | 84.9% |
D3
high
residues 330-496
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00105__D20-173
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13529.14 best | Peptidase_C39_2 | 48.2 | 2.10e-12 | 93.4% | 86.2% |
| PF03412.22 | Peptidase_C39 | 25.7 | 1.30e-05 | 38.9% | 39.1% |
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.90 | 69.0 | 7.47e-01 | 95.8% | 92.2% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.90 | 69.0 | 7.76e-01 | 94.0% | 99.2% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.86 | 61.0 | 6.90e-01 | 92.8% | 92.4% |
| 2btwA00 | 3.90.70.30 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Phytochelatin synthase, N-terminal domain | 0.82 | 78.0 | 7.11e-01 | 99.4% | 90.0% |
| 1cv8A00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.74 | 70.0 | 6.97e-01 | 99.4% | 97.1% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 28.0 | 4.54e-01 | 81.4% | 100.0% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 28.0 | 4.45e-01 | 85.0% | 96.9% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.70 | 30.0 | 4.43e-01 | 87.4% | 92.9% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 28.0 | 3.77e-01 | 96.4% | 69.8% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 27.0 | 4.39e-01 | 82.6% | 100.0% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 30.0 | 4.25e-01 | 96.4% | 85.9% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 29.0 | 4.47e-01 | 99.4% | 100.0% |
| 3npfA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.64 | 29.0 | 4.28e-01 | 92.2% | 100.0% |
| 2k4yA00 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.63 | 33.0 | 4.46e-01 | 70.1% | 97.7% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 55.0 | 4.53e-01 | 95.8% | 98.7% |
| 1xovA02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 27.0 | 3.99e-01 | 91.6% | 100.0% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 44.0 | 5.02e-01 | 92.2% | 99.2% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.60 | 29.0 | 4.06e-01 | 92.8% | 95.1% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.59 | 53.0 | 5.08e-01 | 95.8% | 95.2% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 27.0 | 3.94e-01 | 95.8% | 97.4% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 30.0 | 3.46e-01 | 95.8% | 73.9% |
| 1q8mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 25.0 | 2.87e-01 | 100.0% | 59.5% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4261492 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.93 | 71.0 | 7.88e-01 | 98.2% | 95.6% |
| 2444014 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.92 | 71.0 | 7.77e-01 | 100.0% | 93.0% |
| 2570822 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.91 | 71.0 | 7.69e-01 | 98.2% | 92.4% |
| 4562486 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.90 | 74.0 | 7.67e-01 | 100.0% | 90.3% |
| 3972956 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.89 | 67.0 | 7.26e-01 | 98.8% | 89.7% |
| 5056599 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.88 | 77.0 | 8.09e-01 | 99.4% | 100.0% |
| 3987478 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.88 | 66.0 | 7.51e-01 | 98.2% | 99.2% |
| 3947337 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.88 | 67.0 | 6.97e-01 | 98.8% | 83.9% |
| 4046385 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.87 | 67.0 | 7.34e-01 | 97.0% | 94.3% |
| 3972041 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.87 | 74.0 | 7.60e-01 | 100.0% | 91.9% |
| 4405252 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.86 | 68.0 | 7.39e-01 | 97.6% | 97.1% |
| 3972547 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.85 | 70.0 | 7.16e-01 | 97.0% | 87.5% |
| 5035935 | 219.1.1.26 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Phytochelatin | 0.85 | 81.0 | 7.80e-01 | 98.2% | 94.1% |
| 5046498 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.85 | 78.0 | 7.94e-01 | 100.0% | 97.0% |
| 3970579 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.85 | 68.0 | 7.23e-01 | 97.0% | 92.0% |
| 5030431 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.85 | 82.0 | 7.75e-01 | 99.4% | 87.4% |
| 3255741 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.84 | 78.0 | 7.63e-01 | 97.0% | 100.0% |
| 3385461 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.83 | 69.0 | 7.40e-01 | 97.0% | 97.9% |
| 5018522 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.83 | 72.0 | 6.60e-01 | 99.4% | 72.7% |
| 3968842 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.83 | 60.0 | 6.72e-01 | 93.4% | 94.6% |
| 5019689 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.82 | 77.0 | 7.75e-01 | 100.0% | 97.6% |
| 3252749 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.82 | 78.0 | 6.62e-01 | 99.4% | 99.6% |
| 3223487 | 219.1.1.94 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › ACTMAP-like_C | 0.81 | 78.0 | 6.97e-01 | 100.0% | 91.4% |
| 3593474 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.81 | 74.0 | 6.78e-01 | 96.4% | 95.7% |
| 3402014 | 219.1.1.78 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Guanylate_cyc_2 | 0.81 | 77.0 | 6.77e-01 | 100.0% | 99.6% |
| 3527040 | 219.1.1.94 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › ACTMAP-like_C | 0.80 | 76.0 | 6.45e-01 | 99.4% | 89.8% |
| 4993396 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.80 | 75.0 | 6.08e-01 | 98.8% | 66.8% |
| 5073781 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.80 | 76.0 | 7.13e-01 | 99.4% | 94.9% |
| 4927532 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.80 | 58.0 | 6.72e-01 | 87.4% | 100.0% |
| 3591607 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.80 | 76.0 | 6.54e-01 | 100.0% | 87.3% |
| 4957284 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.79 | 74.0 | 7.33e-01 | 98.2% | 100.0% |
| 5034437 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.79 | 76.0 | 6.39e-01 | 100.0% | 97.6% |
| 4977576 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.79 | 75.0 | 6.90e-01 | 100.0% | 99.0% |
| 3716697 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.79 | 74.0 | 6.42e-01 | 100.0% | 90.2% |
| 5034263 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.77 | 74.0 | 6.01e-01 | 100.0% | 98.2% |
| 4974745 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.77 | 73.0 | 6.97e-01 | 100.0% | 98.9% |
| 4978411 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.77 | 72.0 | 7.07e-01 | 100.0% | 98.9% |
| 4146735 | 219.1.1.159 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6005 | 0.74 | 66.0 | 6.59e-01 | 94.0% | 97.1% |
| 3588655 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.74 | 69.0 | 6.67e-01 | 98.8% | 93.0% |
| 4346242 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.73 | 65.0 | 6.47e-01 | 95.2% | 95.4% |
| 3741878 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.70 | 29.0 | 4.60e-01 | 82.0% | 100.0% |
| 4091533 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.70 | 30.0 | 4.64e-01 | 95.2% | 98.6% |
| 3880325 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.69 | 27.0 | 4.14e-01 | 90.4% | 85.7% |
| 2141735 | 219.1.1.69 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GtgE | 0.68 | 64.0 | 6.05e-01 | 100.0% | 96.4% |
| 4446467 | 4.1.1.278 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_YKFC_2nd | 0.68 | 28.0 | 4.35e-01 | 83.8% | 96.9% |
| 4196229 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.67 | 30.0 | 4.45e-01 | 76.0% | 100.0% |
| 513 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.66 | 29.0 | 4.42e-01 | 95.2% | 100.0% |
| 3626277 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.66 | 34.0 | 4.39e-01 | 90.4% | 87.4% |
| 3392282 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.65 | 59.0 | 4.61e-01 | 95.8% | 76.2% |
| 3626415 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 34.0 | 4.16e-01 | 95.2% | 79.0% |
| 3790897 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 35.0 | 4.38e-01 | 92.2% | 88.0% |
| 1263580 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.63 | 30.0 | 4.25e-01 | 79.0% | 97.3% |
| 5033672 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 58.0 | 5.49e-01 | 96.4% | 97.9% |
| 7396 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.62 | 56.0 | 4.28e-01 | 96.4% | 97.5% |
| 3626691 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 34.0 | 4.20e-01 | 91.6% | 87.0% |
| 3618259 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 35.0 | 4.26e-01 | 90.4% | 90.5% |
| 3576437 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 33.0 | 4.16e-01 | 91.6% | 93.0% |