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IMGVR_UViG_3300025590_000015-3300025590-Ga0209195_100023957
Arc-VirIMGVR_UViG_3300025590_000015-3300025590-Ga0209195_100023957
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-52
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.76 | 69.0 | 6.48e-01 | 100.0% | 89.8% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.65 | 53.0 | 4.73e-01 | 100.0% | 63.1% |
| 3ap1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 51.0 | 3.16e-01 | 100.0% | 14.1% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.63 | 54.0 | 4.53e-01 | 100.0% | 100.0% |
| 4ammA00 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.62 | 53.0 | 3.09e-01 | 100.0% | 12.5% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.61 | 47.0 | 4.31e-01 | 92.7% | 63.6% |
| 2zfuA01 | 1.10.10.2150 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal RNA-processing protein 8, N-terminal domain | 0.60 | 46.0 | 4.49e-01 | 100.0% | 90.2% |
| 1xl3C00 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.59 | 46.0 | 3.80e-01 | 100.0% | 48.4% |
| 3rmzA01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.59 | 51.0 | 3.40e-01 | 100.0% | 81.8% |
| 2mg4A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 40.0 | 3.67e-01 | 85.4% | 62.1% |
| 1znnA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.56 | 45.0 | 2.89e-01 | 100.0% | 27.3% |
| 1e7lA02 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.52 | 40.0 | 3.79e-01 | 95.1% | 92.7% |
| 3r0qA02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.51 | 44.0 | 2.85e-01 | 100.0% | 71.2% |
| 3hjlA03 | 1.20.5.2020 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 36.0 | 3.67e-01 | 85.4% | 97.6% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3206976 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.90 | 73.0 | 5.17e-01 | 100.0% | 31.3% |
| 3239778 | 4156.1.1.5 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › POLQ_helical | 0.73 | 61.0 | 4.08e-01 | 95.1% | 25.6% |
| 3235055 | 3065.1.1.2 ↗ | alpha bundles › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Fatty acid- and retinoid-binding proteins › Gp-FAR-1 | 0.69 | 55.0 | 3.86e-01 | 100.0% | 27.7% |
| 3994520 | 11.12.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD,Neur_chan_memb | 0.65 | 54.0 | 3.30e-01 | 100.0% | 17.5% |
| 3220815 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.65 | 46.0 | 4.86e-01 | 75.6% | 88.6% |
| 3211847 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.63 | 44.0 | 4.31e-01 | 75.6% | 66.7% |
| 3244551 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.63 | 44.0 | 4.49e-01 | 78.0% | 85.0% |
| 4998038 | 301.6.1.0 ↗ | a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like | 0.62 | 48.0 | 3.16e-01 | 100.0% | 20.0% |
| 3223353 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.61 | 44.0 | 4.46e-01 | 78.0% | 87.5% |
| 3392164 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.61 | 48.0 | 4.12e-01 | 100.0% | 51.2% |
| 3223932 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.61 | 43.0 | 4.33e-01 | 78.0% | 82.5% |
| 3795292 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.60 | 42.0 | 4.31e-01 | 78.0% | 87.5% |
| 3940352 | 137.1.1.0 ↗ | alpha bundles › A DNA-binding domain in eukaryotic transcription factors › A DNA-binding domain in eukaryotic transcription factors › A DNA-binding domain in eukaryotic transcription factors | 0.59 | 45.0 | 3.98e-01 | 87.8% | 61.5% |
| None | — | 0.59 | 49.0 | 2.79e-01 | 100.0% | 26.3% | |
| 3236632 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.59 | 43.0 | 4.34e-01 | 78.0% | 87.5% |
| 3220332 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.58 | 41.0 | 4.12e-01 | 78.0% | 85.0% |
| 3228990 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.58 | 40.0 | 4.06e-01 | 75.6% | 85.0% |
| 3243910 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.58 | 41.0 | 3.94e-01 | 78.0% | 70.0% |
| 3461050 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.58 | 39.0 | 3.78e-01 | 70.7% | 66.0% |
| 3218763 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.58 | 42.0 | 4.25e-01 | 85.4% | 85.0% |
| 3217456 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.57 | 42.0 | 4.25e-01 | 85.4% | 87.5% |
| 4223087 | 102.1.1.32 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_9 | 0.57 | 42.0 | 3.18e-01 | 82.9% | 66.7% |
| 3242169 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.57 | 40.0 | 4.11e-01 | 78.0% | 87.5% |
| 3212138 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.57 | 40.0 | 3.49e-01 | 78.0% | 48.0% |
| 3403122 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.57 | 39.0 | 4.02e-01 | 75.6% | 80.0% |
| 3218165 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.56 | 40.0 | 4.10e-01 | 82.9% | 85.0% |
| 3462018 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.55 | 38.0 | 3.92e-01 | 75.6% | 82.5% |
| 3225061 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.55 | 41.0 | 4.13e-01 | 85.4% | 87.5% |
| 3380603 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.54 | 37.0 | 3.69e-01 | 75.6% | 77.8% |
| 3657408 | 192.7.1.26 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › ATG2_CAD | 0.54 | 44.0 | 4.32e-01 | 100.0% | 84.4% |
| 3818478 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.53 | 37.0 | 3.78e-01 | 78.0% | 85.0% |
| 3582067 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.53 | 38.0 | 3.69e-01 | 78.0% | 70.0% |
| 3349711 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.53 | 38.0 | 3.75e-01 | 80.5% | 75.6% |
| 3360537 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.52 | 37.0 | 3.77e-01 | 82.9% | 87.5% |
| 4446417 | 145.1.1.31 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › PF29466 | 0.51 | 36.0 | 3.47e-01 | 75.6% | 70.0% |
| 3223260 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.51 | 37.0 | 3.76e-01 | 87.8% | 85.0% |
| 3237448 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.51 | 37.0 | 3.72e-01 | 85.4% | 85.0% |
| 3341479 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.50 | 36.0 | 3.16e-01 | 80.5% | 48.6% |