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IMGVR_UViG_3300025590_000015-3300025590-Ga0209195_100023974
Arc-VirIMGVR_UViG_3300025590_000015-3300025590-Ga0209195_100023974
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-73
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fhzA00 | 3.30.190.30 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › | 0.76 | 66.0 | 5.26e-01 | 100.0% | 59.4% |
| 6dgiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.72 | 55.0 | 5.11e-01 | 98.1% | 64.7% |
| 2fb9A03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.71 | 52.0 | 5.07e-01 | 92.3% | 71.9% |
| 2pvpA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.70 | 53.0 | 5.03e-01 | 100.0% | 68.8% |
| 3tqtA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.70 | 57.0 | 5.30e-01 | 100.0% | 70.6% |
| 1a9xA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.69 | 55.0 | 5.09e-01 | 100.0% | 67.1% |
| 4qmaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 53.0 | 3.97e-01 | 100.0% | 32.9% |
| 2zyrA02 | 2.60.40.2190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 52.0 | 4.37e-01 | 100.0% | 47.9% |
| 1h2cA00 | 2.70.20.20 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain | 0.67 | 57.0 | 4.42e-01 | 100.0% | 96.0% |
| 2qlcA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.67 | 58.0 | 4.44e-01 | 100.0% | 42.1% |
| 3m70A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 49.0 | 3.93e-01 | 100.0% | 38.7% |
| 1qg3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 55.0 | 4.50e-01 | 100.0% | 50.0% |
| 1x60A01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.65 | 55.0 | 5.06e-01 | 100.0% | 100.0% |
| 5jtwA03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.64 | 54.0 | 4.16e-01 | 100.0% | 57.5% |
| 7pupA01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.62 | 46.0 | 3.11e-01 | 100.0% | 20.0% |
| 3ie7A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.62 | 45.0 | 2.81e-01 | 78.8% | 29.8% |
| 1o59A01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 51.0 | 3.60e-01 | 100.0% | 34.5% |
| 4d8mA03 | 2.100.10.40 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › | 0.60 | 52.0 | 3.50e-01 | 100.0% | 28.1% |
| 1m0wA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.59 | 49.0 | 3.92e-01 | 100.0% | 45.4% |
| 4h4nA00 | 2.60.40.3750 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 49.0 | 4.69e-01 | 100.0% | 82.3% |
| 2zaiB03 | 2.60.40.3020 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 51.0 | 4.08e-01 | 100.0% | 52.3% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.59 | 49.0 | 4.33e-01 | 100.0% | 95.2% |
| 1acxA00 | 2.60.40.230 | Mainly Beta › Sandwich › Immunoglobulin-like › Neocarzinostatin-like | 0.59 | 51.0 | 4.06e-01 | 100.0% | 65.7% |
| 4owpB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.59 | 49.0 | 3.54e-01 | 100.0% | 38.6% |
| 4gucA00 | 2.60.40.3720 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 49.0 | 3.91e-01 | 100.0% | 51.3% |
| 2rijA01 | 3.30.70.2010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 46.0 | 3.45e-01 | 100.0% | 64.5% |
| 6jptA00 | 3.30.230.90 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.57 | 42.0 | 3.34e-01 | 82.7% | 40.5% |
| 4qbuA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.57 | 48.0 | 4.51e-01 | 98.1% | 100.0% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 43.0 | 4.10e-01 | 100.0% | 84.5% |
| 3bguA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 43.0 | 3.74e-01 | 100.0% | 100.0% |
| 6ryvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 42.0 | 3.94e-01 | 98.1% | 69.2% |
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.54 | 39.0 | 3.18e-01 | 82.7% | 41.4% |
| 3eqvA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 40.0 | 3.03e-01 | 82.7% | 76.7% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.53 | 41.0 | 3.39e-01 | 100.0% | 50.4% |
| 3d9wA02 | 2.40.128.150 | Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases | 0.52 | 41.0 | 3.50e-01 | 100.0% | 97.1% |
| 1itxA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.52 | 41.0 | 3.81e-01 | 96.2% | 100.0% |
| 3qp1A00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.51 | 45.0 | 3.12e-01 | 100.0% | 59.0% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 45.0 | 3.25e-01 | 98.1% | 59.2% |
| 1vomA01 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.50 | 39.0 | 2.45e-01 | 88.5% | 82.1% |
| 6jhpA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.50 | 35.0 | 2.20e-01 | 75.0% | 16.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4647160 | 4222.1.1.1 ↗ | a+b two layers › ImmE5-like › ImmE5-like › ImmE5-like › ImmE5 | 0.78 | 68.0 | 5.42e-01 | 100.0% | 59.0% |
| 1031749 | 4222.1.1.1 ↗ | a+b two layers › ImmE5-like › ImmE5-like › ImmE5-like › ImmE5 | 0.76 | 66.0 | 5.29e-01 | 100.0% | 59.4% |
| 5005180 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.76 | 67.0 | 5.05e-01 | 100.0% | 100.0% |
| 3207612 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.71 | 56.0 | 3.86e-01 | 100.0% | 24.7% |
| 4162635 | 4187.1.1.1 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › MerB | 0.69 | 55.0 | 5.19e-01 | 98.1% | 72.3% |
| 4329297 | 2492.1.1.9 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › RadC | 0.68 | 59.0 | 4.51e-01 | 100.0% | 42.4% |
| 4927166 | 4187.1.1.1 ↗ | a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › MerB | 0.68 | 57.0 | 5.34e-01 | 100.0% | 75.4% |
| 4311623 | 2492.1.1.9 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › RadC | 0.68 | 59.0 | 4.38e-01 | 100.0% | 39.3% |
| 4280109 | 2492.1.1.9 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › RadC | 0.67 | 58.0 | 4.43e-01 | 100.0% | 42.4% |
| 5000329 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 55.0 | 4.51e-01 | 100.0% | 60.0% |
| 3672275 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.65 | 53.0 | 3.28e-01 | 100.0% | 23.5% |
| 4973571 | 304.4.1.82 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF3303 | 0.64 | 55.0 | 4.74e-01 | 100.0% | 88.2% |
| 3214500 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.64 | 55.0 | 4.81e-01 | 98.1% | 97.5% |
| 3810819 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.64 | 53.0 | 3.20e-01 | 100.0% | 20.2% |
| 5047263 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.64 | 54.0 | 4.90e-01 | 100.0% | 97.3% |
| 3504328 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 54.0 | 4.71e-01 | 96.2% | 100.0% |
| 4970388 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 55.0 | 4.94e-01 | 100.0% | 70.7% |
| 3274364 | 560.1.1.0 ↗ | few secondary structure elements › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain | 0.64 | 50.0 | 5.13e-01 | 100.0% | 93.9% |
| 4399086 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.63 | 53.0 | 4.58e-01 | 98.1% | 85.9% |
| 3413788 | 11.2.1.8 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › PTEN_C2 | 0.63 | 54.0 | 4.02e-01 | 100.0% | 37.1% |
| 3429729 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.63 | 54.0 | 3.67e-01 | 100.0% | 30.2% |
| 4990834 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.63 | 55.0 | 5.61e-01 | 96.2% | 100.0% |
| 5049625 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.62 | 54.0 | 4.18e-01 | 100.0% | 65.0% |
| 3219365 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.62 | 53.0 | 4.30e-01 | 100.0% | 50.5% |
| 3995060 | 11.1.4.67 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PKC_C2 | 0.61 | 47.0 | 4.06e-01 | 100.0% | 50.5% |
| 5010216 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.61 | 53.0 | 4.85e-01 | 100.0% | 91.4% |
| 4556103 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.61 | 51.0 | 3.78e-01 | 100.0% | 44.7% |
| 4064506 | 304.147.1.1 ↗ | a+b two layers › Alpha-beta plaits › Tetrahydrodipicolinate acetyltransferase N-terminal domain › Tetrahydrodipicolinate acetyltransferase N-terminal domain › DapH_N | 0.61 | 52.0 | 5.06e-01 | 100.0% | 95.0% |
| 4931923 | 304.5.1.7 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 | 0.59 | 47.0 | 4.26e-01 | 96.2% | 88.7% |
| 4078175 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 47.0 | 3.94e-01 | 100.0% | 49.5% |
| 3970823 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.59 | 48.0 | 4.18e-01 | 100.0% | 93.3% |
| 4642338 | 807.1.1.1 ↗ | a+b two layers › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › Allophycocyanin linker chain (domain) › CpcD | 0.59 | 49.0 | 4.97e-01 | 100.0% | 98.1% |
| 3990833 | 382.1.1.13 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Ly-6_related | 0.56 | 46.0 | 3.93e-01 | 100.0% | 82.1% |
| 4938152 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.56 | 47.0 | 4.53e-01 | 100.0% | 96.7% |
| 5028429 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.56 | 44.0 | 3.98e-01 | 100.0% | 100.0% |
| 3824339 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 47.0 | 3.37e-01 | 98.1% | 37.0% |
| 2106284 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.55 | 44.0 | 4.17e-01 | 100.0% | 86.6% |
| 4424527 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.54 | 44.0 | 3.38e-01 | 100.0% | 54.3% |
| 3941308 | 4004.1.1.0 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like | 0.52 | 40.0 | 2.90e-01 | 100.0% | 97.2% |
| 2129789 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.50 | 41.0 | 3.76e-01 | 92.3% | 76.8% |
| 4277768 | 223.2.1.52 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › GAP1-N2 | 0.50 | 36.0 | 2.80e-01 | 82.7% | 33.8% |