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IMGVR_UViG_3300025597_000631-3300025597-Ga0208825_10063102
Arc-VirIMGVR_UViG_3300025597_000631-3300025597-Ga0208825_10063102
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 47-151
Domain cluster:
rep: IMGVR_UViG_3300028191_000374-3300028191-Ga0265595_100242714__D39-152
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.55 | 34.0 | 3.94e-01 | 100.0% | 87.8% |
| 3fr3B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 40.0 | 3.94e-01 | 80.0% | 87.0% |
| 4akgA02 | 1.20.140.100 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain | 0.52 | 40.0 | 3.44e-01 | 81.9% | 81.0% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927432 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.64 | 46.0 | 5.11e-01 | 88.6% | 97.5% |
| 4567788 | 5001.1.1.49 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Chs7 | 0.60 | 48.0 | 3.56e-01 | 86.7% | 48.1% |
| 3975686 | 6050.1.1.2 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage_TAC_2 | 0.59 | 49.0 | 4.99e-01 | 91.4% | 98.1% |
| 3594540 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.59 | 42.0 | 4.51e-01 | 74.3% | 100.0% |
| 3544617 | 1008.1.1.0 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain | 0.58 | 35.0 | 4.22e-01 | 100.0% | 91.4% |
| 3974750 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.57 | 45.0 | 3.31e-01 | 84.8% | 81.4% |
| 4996547 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 40.0 | 3.54e-01 | 73.3% | 59.4% |
| 3791059 | 101.1.1.112 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg | 0.56 | 42.0 | 4.15e-01 | 95.2% | 76.4% |
| 3834320 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.54 | 41.0 | 3.23e-01 | 80.0% | 87.4% |
| 3292299 | 604.12.1.57 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Mg_trans_NIPA | 0.51 | 36.0 | 3.49e-01 | 90.5% | 64.2% |
| 3287378 | 601.23.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III | 0.51 | 42.0 | 3.26e-01 | 93.3% | 86.9% |
| 3726392 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.50 | 34.0 | 3.79e-01 | 75.2% | 92.5% |