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IMGVR_UViG_3300025602_000113-3300025602-Ga0209361_100449410
Arc-VirIMGVR_UViG_3300025602_000113-3300025602-Ga0209361_100449410
Identity
- Kingdom:
- archaea
Quality
71.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 236-335
Domain cluster:
rep: MW073017.1__QPB08539.1__X__00060__D1038-1127
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.69 | 41.0 | 3.30e-01 | 93.0% | 31.1% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.66 | 29.0 | 2.97e-01 | 75.0% | 43.2% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 30.0 | 2.33e-01 | 80.0% | 20.2% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 45.0 | 4.45e-01 | 90.0% | 74.5% |
| 2xauA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 30.0 | 2.43e-01 | 80.0% | 27.9% |
| 1qlbA04 | 3.10.20.820 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 29.0 | 2.99e-01 | 88.0% | 50.0% |
| 3e54A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.52 | 38.0 | 3.33e-01 | 77.0% | 60.4% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3278037 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.82 | 40.0 | 3.09e-01 | 84.0% | 24.6% |
| 3280466 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.79 | 39.0 | 3.06e-01 | 84.0% | 25.3% |
| 3286725 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.77 | 37.0 | 2.99e-01 | 84.0% | 25.4% |
| 3519838 | 4096.1.1.1 ↗ | a+b two layers › NAP-like › NAP-like › NAP-like › NAP | 0.75 | 41.0 | 2.86e-01 | 82.0% | 18.6% |
| 3170708 | 632.1.1.6 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Pho88 | 0.72 | 38.0 | 3.30e-01 | 94.0% | 35.9% |
| 3701882 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.71 | 39.0 | 4.08e-01 | 93.0% | 57.9% |
| 3731979 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.66 | 30.0 | 2.31e-01 | 82.0% | 19.1% |
| 3838659 | 5085.1.1.0 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.64 | 40.0 | 2.65e-01 | 96.0% | 15.5% |
| 3558274 | 4096.1.1.1 ↗ | a+b two layers › NAP-like › NAP-like › NAP-like › NAP | 0.60 | 37.0 | 2.63e-01 | 78.0% | 20.7% |
| 4161112 | 7573.1.1.4 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › UPRTase | 0.60 | 27.0 | 2.10e-01 | 82.0% | 20.0% |
| 3415966 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.59 | 46.0 | 3.25e-01 | 84.0% | 54.7% |
| 3937747 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.59 | 51.0 | 3.64e-01 | 96.0% | 93.3% |
| 3940070 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.58 | 40.0 | 2.77e-01 | 71.0% | 21.9% |
| 4890219 | 109.21.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nup96 | 0.57 | 50.0 | 3.05e-01 | 99.0% | 53.3% |
| 3925086 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.57 | 46.0 | 3.15e-01 | 87.0% | 57.7% |
| 3593949 | 4096.1.1.0 ↗ | a+b two layers › NAP-like › NAP-like › NAP-like | 0.56 | 34.0 | 2.45e-01 | 77.0% | 22.3% |
| 5020512 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.56 | 43.0 | 3.33e-01 | 82.0% | 45.8% |
| 3213940 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.55 | 45.0 | 3.12e-01 | 91.0% | 51.7% |
| 3574416 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.55 | 43.0 | 3.53e-01 | 84.0% | 98.9% |
| 2391543 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.54 | 43.0 | 3.45e-01 | 85.0% | 97.0% |
| 4050509 | 4096.1.1.1 ↗ | a+b two layers › NAP-like › NAP-like › NAP-like › NAP | 0.54 | 38.0 | 2.76e-01 | 78.0% | 26.9% |
| 3494833 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 46.0 | 2.99e-01 | 97.0% | 84.9% |
| 4022589 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.52 | 39.0 | 3.05e-01 | 81.0% | 85.8% |
D2
medium
residues 113-201