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IMGVR_UViG_3300025618_000515-3300025618-Ga0208693_100165317
Arc-VirIMGVR_UViG_3300025618_000515-3300025618-Ga0208693_100165317
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-185
Domain cluster:
rep: IMGVR_UViG_3300028603_004297-3300028603-Ga0265293_100394579__D186-354
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03837.20 best | RecT | 67.7 | 1.50e-18 | 99.3% | 87.8% |
D2
medium
residues 231-262
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e7lA02 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.85 | 68.0 | 5.77e-01 | 93.8% | 54.5% |
| 1xkpB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.73 | 55.0 | 3.84e-01 | 100.0% | 24.0% |
| 3f2bA05 | 6.10.50.10 | Special › Helix non-globular › Insulin-like, subunit E › | 0.67 | 47.0 | 4.28e-01 | 78.1% | 58.3% |
| 3afhA04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.67 | 53.0 | 4.73e-01 | 96.9% | 94.0% |
| 3ufeB01 | 1.20.890.100 | Mainly Alpha › Up-down Bundle › cAMP-dependent Protein Kinase, Chain A › | 0.64 | 47.0 | 4.16e-01 | 90.6% | 54.2% |
| 1kblA05 | 1.20.80.30 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.60 | 45.0 | 3.55e-01 | 96.9% | 66.3% |
| 2z3xA00 | 6.10.10.80 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like | 0.58 | 44.0 | 3.82e-01 | 100.0% | 51.8% |
| 1gkuB03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 43.0 | 2.77e-01 | 90.6% | 48.3% |
| 3q1xA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.53 | 38.0 | 2.69e-01 | 100.0% | 20.1% |