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IMGVR_UViG_3300025626_002430-3300025626-Ga0209716_100215415
Arc-VirIMGVR_UViG_3300025626_002430-3300025626-Ga0209716_100215415
Identity
- Kingdom:
- archaea
Quality
83.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 173-338
Domain cluster:
rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
Pfam (5)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13173.13 best | AAA_14 | 29.4 | 9.50e-07 | 78.3% | 79.7% |
| PF00004.36 | AAA | 147.7 | 3.80e-43 | 77.1% | 97.0% |
| PF07728.21 | AAA_5 | 27.2 | 4.80e-06 | 72.9% | 57.6% |
| PF05496.19 | RuvB_N | 33.8 | 3.90e-08 | 62.1% | 43.4% |
| PF00910.29 | RNA_helicase | 22.3 | 2.10e-04 | 60.8% | 58.1% |
D2
high
residues 344-437
Domain cluster:
rep: IMGVR_UViG_3300010350_000704-3300010350-Ga0116244_1000871117__D15-101
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17862.8 best | AAA_lid_3 | 45.0 | 8.60e-12 | 56.4% | 77.8% |
D3
high
residues 448-618
Domain cluster:
rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00004.36 best | AAA | 141.4 | 3.20e-41 | 77.2% | 99.2% |
D4
high
residues 619-698
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a3vB01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.89 | 75.0 | 7.94e-01 | 97.5% | 100.0% |
| 5ubvA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.86 | 72.0 | 7.58e-01 | 97.5% | 100.0% |
| 1xwiA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.86 | 80.0 | 6.78e-01 | 100.0% | 100.0% |
| 3d8bB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.85 | 77.0 | 7.65e-01 | 96.2% | 98.8% |
| 7wd3A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.85 | 74.0 | 7.38e-01 | 93.8% | 100.0% |
| 7swlB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.82 | 75.0 | 6.86e-01 | 98.8% | 100.0% |
| 6p10B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.82 | 74.0 | 7.12e-01 | 98.8% | 93.4% |
| 2dznF00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.81 | 65.0 | 6.89e-01 | 95.0% | 100.0% |
| 4d81A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.80 | 73.0 | 6.95e-01 | 100.0% | 85.1% |
| 6b5cA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.80 | 69.0 | 6.80e-01 | 93.8% | 98.8% |
| 2x8aA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.79 | 70.0 | 7.07e-01 | 98.8% | 96.2% |
| 2l09A01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.76 | 49.0 | 5.87e-01 | 80.0% | 100.0% |
| 1w5sA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 65.0 | 6.34e-01 | 96.2% | 88.6% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.73 | 62.0 | 6.14e-01 | 100.0% | 90.4% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.72 | 61.0 | 6.10e-01 | 100.0% | 90.4% |
| 1jqjD03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.72 | 56.0 | 5.48e-01 | 95.0% | 77.9% |
| 3zh9B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.72 | 56.0 | 5.94e-01 | 97.5% | 97.1% |
| 2ly8A00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.72 | 60.0 | 5.25e-01 | 92.5% | 89.3% |
| 2qbyA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.71 | 62.0 | 5.74e-01 | 98.8% | 77.7% |
| 2kebA00 | 1.10.8.530 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA polymerase alpha-primase, subunit B, N-terminal domain | 0.71 | 59.0 | 6.02e-01 | 98.8% | 94.9% |
| 2z4sA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.70 | 58.0 | 6.03e-01 | 98.8% | 100.0% |
| 1e94E03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.70 | 62.0 | 5.66e-01 | 100.0% | 98.1% |
| 6dkuA01 | 1.10.8.950 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Filoviridae VP35, C-terminal inhibitory domain, helical subdomain | 0.68 | 54.0 | 5.62e-01 | 96.2% | 93.2% |
| 1q9cA01 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.68 | 59.0 | 4.81e-01 | 95.0% | 97.3% |
| 4ciuA04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 57.0 | 5.41e-01 | 91.3% | 95.7% |
| 3t15A02 | 1.10.8.1070 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 60.0 | 5.47e-01 | 100.0% | 90.7% |
| 2v6zM00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 56.0 | 5.75e-01 | 97.5% | 100.0% |
| 2kruA01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.66 | 42.0 | 4.94e-01 | 78.8% | 100.0% |
| 1ojlA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.66 | 55.0 | 5.62e-01 | 100.0% | 96.1% |
| 2kxeA00 | 1.10.8.800 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › D-family DNA polymerase, DP1 subunit N-terminal domain | 0.65 | 48.0 | 5.00e-01 | 92.5% | 88.9% |
| 3u60E02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 42.0 | 4.68e-01 | 83.7% | 89.8% |
| 4nftC00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.65 | 54.0 | 4.20e-01 | 92.5% | 98.3% |
| 2wzfA01 | 1.10.1740.130 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.62 | 50.0 | 4.72e-01 | 98.8% | 72.1% |
| 2zg6A02 | 1.10.150.660 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.61 | 40.0 | 4.18e-01 | 91.3% | 73.6% |
| 4uqwB00 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.60 | 46.0 | 3.83e-01 | 86.3% | 80.9% |
| 2pq7A00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.60 | 45.0 | 3.58e-01 | 82.5% | 41.6% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.59 | 50.0 | 4.47e-01 | 93.8% | 95.5% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 38.0 | 3.52e-01 | 88.7% | 53.5% |
| 5c8gB00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.57 | 43.0 | 3.86e-01 | 81.2% | 79.5% |
| 7tfmA01 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.54 | 44.0 | 3.78e-01 | 91.3% | 76.1% |
| 1bh9B00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.53 | 42.0 | 4.11e-01 | 100.0% | 76.4% |
| 2w0gA00 | 1.20.58.610 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain | 0.52 | 44.0 | 3.71e-01 | 91.3% | 74.4% |
| 6gwuD00 | 3.40.1050.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-carbonic Anhydrase; Chain A › Carbonic anhydrase | 0.52 | 41.0 | 3.07e-01 | 86.3% | 44.1% |
| 4y0bA00 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.51 | 41.0 | 3.57e-01 | 93.8% | 74.3% |
| 1tj7A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.51 | 38.0 | 3.45e-01 | 78.8% | 69.5% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3286978 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.91 | 84.0 | 8.50e-01 | 100.0% | 97.5% |
| 3406945 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.90 | 76.0 | 7.82e-01 | 100.0% | 94.7% |
| 3254374 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.90 | 85.0 | 7.46e-01 | 100.0% | 97.3% |
| 3957454 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.89 | 80.0 | 7.86e-01 | 98.8% | 89.4% |
| 3788327 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.89 | 84.0 | 8.03e-01 | 100.0% | 94.4% |
| 3218728 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.89 | 80.0 | 7.89e-01 | 96.2% | 98.8% |
| 3773199 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.89 | 82.0 | 7.54e-01 | 98.8% | 87.0% |
| 3740564 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.88 | 82.0 | 7.87e-01 | 100.0% | 95.6% |
| 4301631 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.88 | 83.0 | 6.96e-01 | 100.0% | 89.6% |
| 3683332 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.88 | 81.0 | 6.59e-01 | 98.8% | 98.6% |
| 3514545 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.88 | 82.0 | 8.23e-01 | 100.0% | 100.0% |
| 3399136 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.88 | 82.0 | 7.18e-01 | 100.0% | 80.7% |
| 3319532 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.87 | 81.0 | 6.97e-01 | 100.0% | 97.5% |
| 4565291 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.87 | 82.0 | 6.89e-01 | 100.0% | 88.0% |
| 3888410 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.87 | 81.0 | 7.92e-01 | 98.8% | 100.0% |
| 3261835 | 148.1.3.6 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Vps4_C,AAA_lid_3 | 0.87 | 82.0 | 7.23e-01 | 100.0% | 75.5% |
| 3740400 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.87 | 82.0 | 7.34e-01 | 100.0% | 100.0% |
| 5024799 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.87 | 78.0 | 7.90e-01 | 100.0% | 97.5% |
| 3596624 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.87 | 81.0 | 6.48e-01 | 100.0% | 97.9% |
| 4433592 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.87 | 79.0 | 7.91e-01 | 100.0% | 97.5% |
| 3519282 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.87 | 81.0 | 7.30e-01 | 100.0% | 96.2% |
| 3582627 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.87 | 81.0 | 7.44e-01 | 100.0% | 89.0% |
| 3213164 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.87 | 75.0 | 6.35e-01 | 98.8% | 59.2% |
| 4989621 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.86 | 77.0 | 7.76e-01 | 100.0% | 96.2% |
| 3928661 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.86 | 80.0 | 6.99e-01 | 100.0% | 95.7% |
| 3201642 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.86 | 79.0 | 7.80e-01 | 100.0% | 92.9% |
| 4941579 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.86 | 78.0 | 7.18e-01 | 100.0% | 78.0% |
| 3305472 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.86 | 74.0 | 6.99e-01 | 98.8% | 77.9% |
| 3266036 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.86 | 80.0 | 7.53e-01 | 100.0% | 96.8% |
| 1167753 | 148.1.3.6 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Vps4_C,AAA_lid_3 | 0.86 | 78.0 | 7.27e-01 | 100.0% | 80.4% |
| 3824198 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.86 | 80.0 | 6.47e-01 | 100.0% | 98.6% |
| 3456399 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.86 | 74.0 | 5.88e-01 | 98.8% | 49.3% |
| 1233085 | 148.1.3.6 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Vps4_C,AAA_lid_3 | 0.85 | 80.0 | 7.16e-01 | 100.0% | 79.4% |
| 3313988 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 77.0 | 7.72e-01 | 100.0% | 96.2% |
| 3926386 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.85 | 74.0 | 7.23e-01 | 98.8% | 87.1% |
| 3725963 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 78.0 | 7.21e-01 | 98.8% | 98.0% |
| 4029619 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 79.0 | 7.29e-01 | 100.0% | 97.0% |
| 4101262 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 78.0 | 7.51e-01 | 100.0% | 94.4% |
| 4234948 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 79.0 | 6.42e-01 | 100.0% | 93.6% |
| 3343850 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 79.0 | 7.57e-01 | 100.0% | 97.8% |
| 3266038 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 78.0 | 7.23e-01 | 100.0% | 96.0% |
| 3171757 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.85 | 72.0 | 6.66e-01 | 97.5% | 73.0% |
| 4369469 | 148.1.3.203 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF28760 | 0.85 | 78.0 | 6.44e-01 | 100.0% | 81.5% |
| 3186317 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 76.0 | 7.69e-01 | 100.0% | 97.5% |
| 5059404 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.84 | 76.0 | 6.69e-01 | 100.0% | 68.4% |
| 3695631 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.84 | 77.0 | 7.00e-01 | 98.8% | 100.0% |
| 5052308 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.84 | 79.0 | 7.53e-01 | 100.0% | 97.8% |
| 3772226 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 78.0 | 7.49e-01 | 100.0% | 96.7% |
| 3616017 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 78.0 | 7.35e-01 | 100.0% | 95.8% |
| 5055569 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.84 | 76.0 | 6.19e-01 | 100.0% | 55.7% |
| 3311758 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.84 | 77.0 | 7.38e-01 | 98.8% | 97.8% |
| 5000555 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 78.0 | 7.62e-01 | 100.0% | 97.6% |
| 5001488 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.84 | 77.0 | 4.68e-01 | 100.0% | 20.6% |
| 3680573 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.84 | 78.0 | 6.71e-01 | 100.0% | 90.8% |
| 3187879 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 78.0 | 6.57e-01 | 100.0% | 100.0% |
| 3268426 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.84 | 75.0 | 7.51e-01 | 100.0% | 96.2% |
| 4100763 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 75.0 | 7.51e-01 | 98.8% | 95.0% |
| 4180021 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 78.0 | 7.15e-01 | 100.0% | 97.0% |
| 5063437 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.83 | 73.0 | 7.34e-01 | 98.8% | 95.0% |
| 3402127 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.83 | 78.0 | 7.44e-01 | 100.0% | 95.6% |
| 4989650 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.83 | 75.0 | 7.15e-01 | 100.0% | 85.6% |
| 3717504 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.81 | 75.0 | 7.51e-01 | 100.0% | 100.0% |
| 3743727 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.81 | 74.0 | 7.28e-01 | 100.0% | 96.5% |
| 4483086 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 68.0 | 6.43e-01 | 98.8% | 78.9% |
| 4374130 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.78 | 66.0 | 6.54e-01 | 98.8% | 87.1% |
| 3695484 | 148.1.3.212 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_13 | 0.77 | 71.0 | 6.33e-01 | 100.0% | 72.7% |
| 3964153 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.76 | 65.0 | 6.68e-01 | 100.0% | 98.7% |
| 5061574 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.75 | 64.0 | 6.55e-01 | 97.5% | 100.0% |
| 4117160 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.74 | 62.0 | 6.25e-01 | 100.0% | 92.5% |
| 3838403 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.74 | 62.0 | 6.25e-01 | 98.8% | 92.5% |
| 4204950 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 62.0 | 6.24e-01 | 100.0% | 93.8% |
| 3598191 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 65.0 | 5.59e-01 | 100.0% | 100.0% |
| 4269992 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 58.0 | 5.96e-01 | 98.8% | 92.0% |
| 2620469 | 148.1.3.26 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9 | 0.72 | 63.0 | 6.07e-01 | 98.8% | 95.6% |
| 4028512 | 148.1.3.26 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9 | 0.72 | 62.0 | 5.79e-01 | 97.5% | 85.0% |
| 3519328 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.72 | 59.0 | 5.64e-01 | 100.0% | 76.8% |
| 4246144 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 57.0 | 5.74e-01 | 97.5% | 87.5% |
| 3112458 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 61.0 | 5.82e-01 | 98.8% | 95.8% |
| 3399195 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 42.0 | 4.84e-01 | 85.0% | 90.9% |
| 5077867 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 53.0 | 3.74e-01 | 98.8% | 26.9% |
| 4608675 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 57.0 | 5.44e-01 | 97.5% | 87.4% |
| 5050506 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 54.0 | 5.33e-01 | 93.8% | 100.0% |
| 3524656 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.61 | 50.0 | 4.32e-01 | 88.7% | 59.2% |
| 3900651 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.61 | 50.0 | 4.79e-01 | 90.0% | 76.8% |
| None | — | 0.59 | 48.0 | 4.10e-01 | 95.0% | 92.4% | |
| 4097048 | 131.1.1.0 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like | 0.59 | 49.0 | 3.63e-01 | 96.2% | 72.6% |
| None | — | 0.58 | 48.0 | 3.59e-01 | 96.2% | 73.0% | |
| 4971262 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.53 | 38.0 | 3.37e-01 | 75.0% | 53.0% |
D5
medium
residues 6-84
Domain cluster:
rep: DNA-dependent_RNA_polymerase_subunit_rpo147__YP_232980__Vaccinia_virus__10245__D277-311_370-443
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hu1A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.96 | 92.0 | 8.52e-01 | 100.0% | 84.4% |
| 4ga6A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.92 | 87.0 | 8.57e-01 | 100.0% | 97.6% |
| 1cz4A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.91 | 85.0 | 8.02e-01 | 100.0% | 90.2% |
| 2napA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.89 | 83.0 | 7.16e-01 | 98.7% | 99.1% |
| 1cr5A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.88 | 80.0 | 8.13e-01 | 100.0% | 97.4% |
| 1y5lA02 | 3.40.50.12440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.88 | 82.0 | 4.45e-01 | 100.0% | 11.9% |
| 7eu1A01 | 1.10.274.100 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › RNA polymerase Rpb1, domain 3 | 0.88 | 82.0 | 6.57e-01 | 100.0% | 73.2% |
| 1ti2A04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.87 | 82.0 | 6.37e-01 | 100.0% | 88.4% |
| 2e7zA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.87 | 81.0 | 6.26e-01 | 100.0% | 82.6% |
| 1g8kA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.87 | 81.0 | 6.64e-01 | 100.0% | 83.7% |
| 7nz1G01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.87 | 80.0 | 7.42e-01 | 97.5% | 100.0% |
| 1h0hA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.86 | 80.0 | 6.04e-01 | 100.0% | 73.3% |
| 1dmrA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.86 | 80.0 | 6.18e-01 | 100.0% | 79.1% |
| 2ki8A01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.86 | 80.0 | 6.74e-01 | 100.0% | 84.8% |
| 1wlfA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.86 | 80.0 | 7.86e-01 | 100.0% | 94.0% |
| 1ogyA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.86 | 79.0 | 6.69e-01 | 98.7% | 93.5% |
| 1aw8B00 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.86 | 68.0 | 6.40e-01 | 82.3% | 71.4% |
| 1q16A13 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.85 | 80.0 | 6.30e-01 | 100.0% | 76.7% |
| 1ynjD04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.85 | 79.0 | 6.32e-01 | 100.0% | 84.8% |
| 8e9gG01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.85 | 77.0 | 7.09e-01 | 97.5% | 100.0% |
| 6cz7C02 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.85 | 74.0 | 6.14e-01 | 93.7% | 100.0% |
| 2vpzA05 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.85 | 78.0 | 6.10e-01 | 100.0% | 79.9% |
| 3d30A01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.84 | 78.0 | 6.94e-01 | 100.0% | 91.7% |
| 1twfA03 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.84 | 79.0 | 7.18e-01 | 100.0% | 79.2% |
| 1qcsA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.84 | 79.0 | 7.79e-01 | 100.0% | 96.3% |
| 2iv2X04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.83 | 78.0 | 7.14e-01 | 100.0% | 98.0% |
| 3ougA00 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.82 | 77.0 | 6.88e-01 | 100.0% | 74.5% |
| 3sumB00 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.82 | 76.0 | 6.24e-01 | 100.0% | 87.5% |
| 4jcwA01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.82 | 76.0 | 6.85e-01 | 100.0% | 95.2% |
| 1zc1A01 | 2.40.40.50 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › Ubiquitin fusion degradation protein UFD1, N-terminal domain | 0.80 | 73.0 | 6.69e-01 | 100.0% | 91.3% |
| 1n10A01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.80 | 73.0 | 6.41e-01 | 100.0% | 94.7% |
| 1yleA02 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.79 | 59.0 | 6.50e-01 | 100.0% | 95.4% |
| 1twfB06 | 2.40.270.10 | Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 | 0.77 | 69.0 | 4.95e-01 | 100.0% | 68.6% |
| 2zbvC02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.68 | 60.0 | 5.58e-01 | 98.7% | 91.2% |
| 2fivA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.67 | 54.0 | 4.78e-01 | 87.3% | 79.6% |
| 5b6iA02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.65 | 59.0 | 5.31e-01 | 100.0% | 90.7% |
| 1zx5A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 39.0 | 3.91e-01 | 100.0% | 57.8% |
| 1yg9A03 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.61 | 47.0 | 4.15e-01 | 83.5% | 86.3% |
| 3fanA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 42.0 | 4.31e-01 | 91.1% | 79.5% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 51.0 | 4.74e-01 | 100.0% | 98.1% |
| 1o54A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.59 | 40.0 | 4.25e-01 | 70.9% | 88.9% |
| 2zeqA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 44.0 | 4.46e-01 | 100.0% | 83.3% |
| 1bxoA02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.58 | 47.0 | 3.87e-01 | 92.4% | 74.3% |
| 4wd3A02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.55 | 42.0 | 4.29e-01 | 100.0% | 88.0% |
| 3ethA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.55 | 38.0 | 4.11e-01 | 100.0% | 93.5% |
| 1f2rI00 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 41.0 | 3.88e-01 | 100.0% | 65.0% |
| 3pihA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 39.0 | 4.06e-01 | 96.2% | 83.3% |
| 1whjA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.53 | 39.0 | 3.64e-01 | 78.5% | 77.5% |
| 2xi9B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 34.0 | 3.16e-01 | 94.9% | 48.6% |
| 8eq1A01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.51 | 44.0 | 4.32e-01 | 98.7% | 100.0% |
| 7r6yA01 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.51 | 43.0 | 4.19e-01 | 98.7% | 100.0% |
| 5ccbA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.50 | 35.0 | 3.68e-01 | 74.7% | 83.3% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3611762 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.98 | 94.0 | 8.71e-01 | 100.0% | 85.3% |
| 3409396 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.97 | 93.0 | 8.28e-01 | 100.0% | 77.1% |
| 3486347 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.97 | 93.0 | 8.60e-01 | 100.0% | 85.3% |
| 4607187 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.96 | 92.0 | 8.55e-01 | 100.0% | 87.4% |
| 5060583 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.96 | 92.0 | 8.95e-01 | 100.0% | 96.5% |
| 5001485 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.96 | 92.0 | 8.95e-01 | 100.0% | 96.5% |
| 4024752 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.95 | 90.0 | 8.18e-01 | 100.0% | 82.0% |
| 4097451 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.94 | 90.0 | 8.75e-01 | 100.0% | 97.6% |
| 4986590 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.94 | 90.0 | 8.77e-01 | 100.0% | 95.3% |
| 5069203 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.94 | 90.0 | 8.53e-01 | 100.0% | 92.2% |
| 3602941 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.94 | 90.0 | 8.73e-01 | 100.0% | 95.3% |
| 4938514 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.94 | 88.0 | 8.53e-01 | 97.5% | 95.3% |
| 5037727 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.94 | 90.0 | 8.73e-01 | 100.0% | 95.3% |
| 5066567 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.94 | 90.0 | 8.32e-01 | 100.0% | 88.4% |
| 4977837 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.94 | 90.0 | 8.72e-01 | 100.0% | 96.5% |
| 5052052 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.94 | 90.0 | 8.31e-01 | 100.0% | 86.3% |
| 4970084 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.94 | 89.0 | 8.70e-01 | 100.0% | 100.0% |
| 4488210 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.94 | 89.0 | 8.67e-01 | 100.0% | 95.3% |
| 3748306 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.94 | 89.0 | 8.29e-01 | 100.0% | 94.7% |
| 4241168 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.94 | 88.0 | 8.81e-01 | 98.7% | 100.0% |
| 4954799 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.94 | 89.0 | 8.27e-01 | 100.0% | 88.4% |
| 4967302 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.93 | 88.0 | 8.40e-01 | 100.0% | 92.2% |
| 4947745 | 1.1.2.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_2 | 0.93 | 88.0 | 8.40e-01 | 100.0% | 93.3% |
| 4943103 | 1.1.2.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_2 | 0.93 | 88.0 | 8.61e-01 | 100.0% | 98.8% |
| 4948370 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.93 | 88.0 | 7.10e-01 | 100.0% | 60.1% |
| 4979696 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.93 | 88.0 | 8.55e-01 | 100.0% | 96.5% |
| 1883479 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.93 | 88.0 | 8.33e-01 | 100.0% | 92.2% |
| 5079577 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.93 | 85.0 | 8.49e-01 | 96.2% | 96.2% |
| 4943791 | 1.1.2.45 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_2 | 0.92 | 87.0 | 8.51e-01 | 100.0% | 97.6% |
| 4978544 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.92 | 86.0 | 8.41e-01 | 98.7% | 96.5% |
| 4108919 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.92 | 88.0 | 8.53e-01 | 100.0% | 95.3% |
| 3646137 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.92 | 87.0 | 6.24e-01 | 100.0% | 60.0% |
| 5074694 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.92 | 86.0 | 6.91e-01 | 98.7% | 57.1% |
| 4970875 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.92 | 87.0 | 8.50e-01 | 100.0% | 95.3% |
| 5074498 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.92 | 87.0 | 7.50e-01 | 100.0% | 72.2% |
| 5074983 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.92 | 87.0 | 8.28e-01 | 100.0% | 90.0% |
| 4967958 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.92 | 87.0 | 8.08e-01 | 100.0% | 87.4% |
| 5043151 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.92 | 84.0 | 8.42e-01 | 96.2% | 97.5% |
| 4995354 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.92 | 87.0 | 8.48e-01 | 100.0% | 97.6% |
| 5011232 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.92 | 86.0 | 8.56e-01 | 100.0% | 97.5% |
| 4171290 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.92 | 87.0 | 8.48e-01 | 100.0% | 95.3% |
| 4990349 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.92 | 85.0 | 8.55e-01 | 98.7% | 97.5% |
| 5045002 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.91 | 86.0 | 8.22e-01 | 100.0% | 90.0% |
| 3169042 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.91 | 86.0 | 7.86e-01 | 100.0% | 87.0% |
| 5076554 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.91 | 84.0 | 8.42e-01 | 97.5% | 97.5% |
| 3343851 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.91 | 85.0 | 5.96e-01 | 100.0% | 44.2% |
| 4938645 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.91 | 85.0 | 8.28e-01 | 98.7% | 96.5% |
| 4945245 | 1.1.2.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Glycos_trans_3N | 0.91 | 85.0 | 8.48e-01 | 100.0% | 97.5% |
| 5073963 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.91 | 85.0 | 8.31e-01 | 98.7% | 94.1% |
| 5048468 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.91 | 79.0 | 8.14e-01 | 98.7% | 96.0% |
| 5060218 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.91 | 86.0 | 8.39e-01 | 100.0% | 98.8% |
| 5083684 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.91 | 82.0 | 8.41e-01 | 100.0% | 98.7% |
| 4446061 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.91 | 84.0 | 8.38e-01 | 97.5% | 96.2% |
| 3706161 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.90 | 83.0 | 8.13e-01 | 100.0% | 90.6% |
| 5050490 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.90 | 85.0 | 6.96e-01 | 100.0% | 86.6% |
| 31 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.90 | 84.0 | 8.01e-01 | 100.0% | 91.2% |
| 3684407 | 1.1.2.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF26429 | 0.90 | 85.0 | 6.44e-01 | 100.0% | 75.2% |
| 5077330 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.90 | 84.0 | 7.56e-01 | 100.0% | 77.1% |
| 5049516 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.90 | 85.0 | 6.99e-01 | 100.0% | 82.3% |
| 5053172 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.90 | 85.0 | 8.25e-01 | 100.0% | 94.1% |
| 4977163 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.90 | 85.0 | 8.12e-01 | 100.0% | 89.8% |
| 5053173 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.89 | 84.0 | 7.83e-01 | 100.0% | 84.2% |
| 3273202 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.88 | 83.0 | 7.57e-01 | 100.0% | 91.0% |
| 3784921 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.88 | 83.0 | 8.08e-01 | 100.0% | 91.8% |
| 5053174 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.88 | 83.0 | 7.93e-01 | 100.0% | 88.9% |
| 3287818 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.88 | 83.0 | 6.46e-01 | 100.0% | 82.6% |
| 4943394 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.88 | 83.0 | 7.01e-01 | 100.0% | 92.7% |
| 5054391 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.88 | 83.0 | 8.12e-01 | 100.0% | 95.3% |
| 3946287 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.88 | 83.0 | 6.52e-01 | 100.0% | 76.7% |
| 3954832 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.88 | 82.0 | 6.57e-01 | 100.0% | 86.9% |
| 5005268 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.88 | 83.0 | 7.53e-01 | 100.0% | 96.0% |
| 3360997 | 1.1.2.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › RNA_pol_Rpb1_2 | 0.88 | 82.0 | 6.56e-01 | 100.0% | 70.3% |
| 3945800 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.87 | 82.0 | 6.24e-01 | 100.0% | 72.1% |
| 2968642 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.87 | 82.0 | 6.91e-01 | 100.0% | 80.3% |
| 5006472 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.87 | 77.0 | 7.71e-01 | 94.9% | 100.0% |
| 3514644 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.87 | 81.0 | 7.70e-01 | 100.0% | 92.2% |
| 4023557 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.86 | 81.0 | 6.45e-01 | 100.0% | 82.8% |
| 3967671 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.86 | 80.0 | 7.18e-01 | 98.7% | 91.4% |
| 33 | 1.1.2.15 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PEX-2N | 0.86 | 80.0 | 7.86e-01 | 100.0% | 94.0% |
| 3430527 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.86 | 78.0 | 7.86e-01 | 100.0% | 96.2% |
| 4402984 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.85 | 80.0 | 7.17e-01 | 100.0% | 99.0% |
| 4991006 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.85 | 79.0 | 7.74e-01 | 100.0% | 92.9% |
| 2970378 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.85 | 79.0 | 6.85e-01 | 100.0% | 86.3% |
| 3412967 | 1.1.2.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N | 0.85 | 80.0 | 7.58e-01 | 100.0% | 96.7% |
| 3933010 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.85 | 80.0 | 7.17e-01 | 100.0% | 81.9% |
| 3824979 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.85 | 79.0 | 7.55e-01 | 100.0% | 91.1% |
| 3492328 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.84 | 79.0 | 7.89e-01 | 100.0% | 98.8% |
| 3744692 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.84 | 74.0 | 7.42e-01 | 100.0% | 92.5% |
| 4027677 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.84 | 79.0 | 7.69e-01 | 100.0% | 96.5% |
| 4670243 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.84 | 79.0 | 7.19e-01 | 100.0% | 92.0% |
| 3193685 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.84 | 79.0 | 7.33e-01 | 100.0% | 96.8% |
| 4354975 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.83 | 77.0 | 5.99e-01 | 100.0% | 53.1% |
| 21 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.83 | 78.0 | 6.39e-01 | 100.0% | 72.9% |
| 3195760 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.83 | 78.0 | 7.40e-01 | 100.0% | 88.9% |
| 4346976 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.83 | 76.0 | 7.45e-01 | 100.0% | 92.9% |
| 4014411 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.82 | 76.0 | 7.11e-01 | 100.0% | 93.7% |
| 3254378 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.82 | 73.0 | 7.36e-01 | 96.2% | 100.0% |
| 3740727 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.80 | 72.0 | 7.08e-01 | 97.5% | 98.8% |
| 4863286 | 1.1.2.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N | 0.79 | 71.0 | 6.94e-01 | 100.0% | 94.2% |
| 3740728 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.76 | 69.0 | 6.81e-01 | 100.0% | 96.5% |
D6
medium
residues 92-156
Domain cluster:
rep: IMGVR_UViG_3300001073_000001-3300001073-C687J13245_10000113__D94-163
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pjhB02 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.85 | 77.0 | 6.46e-01 | 100.0% | 67.9% |
| 1qcsA02 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.79 | 71.0 | 6.04e-01 | 100.0% | 81.0% |
| 1cr5B02 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.79 | 72.0 | 6.26e-01 | 100.0% | 86.3% |
| 1zc1A02 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.79 | 70.0 | 6.64e-01 | 100.0% | 94.8% |
| 2jv2A00 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.77 | 68.0 | 6.53e-01 | 100.0% | 86.8% |
| 5xamA02 | 3.30.70.3220 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 44.0 | 3.36e-01 | 83.1% | 84.5% |
| 2wnyA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.58 | 47.0 | 3.86e-01 | 95.4% | 99.3% |
| 2jvrA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 41.0 | 3.93e-01 | 78.5% | 92.5% |
| 2gmlA02 | 3.30.70.1560 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif | 0.56 | 41.0 | 3.98e-01 | 80.0% | 97.3% |
| 2nwuB01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.56 | 43.0 | 3.64e-01 | 90.8% | 92.1% |
| 2w2sA00 | 3.10.460.20 | Alpha Beta › Roll › VSV matrix protein › Rhabdovirus matrix protein M2 | 0.55 | 44.0 | 3.45e-01 | 93.8% | 81.6% |
| 2cqpA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 41.0 | 3.61e-01 | 83.1% | 81.6% |
| 3u9sE04 | 3.30.700.40 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › | 0.53 | 40.0 | 3.32e-01 | 83.1% | 62.4% |
| 1wi8A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 37.0 | 3.54e-01 | 73.8% | 98.7% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 39.0 | 3.32e-01 | 80.0% | 64.9% |
| 6wy9B02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.52 | 39.0 | 3.52e-01 | 84.6% | 72.6% |
| 2w5yA01 | 2.170.270.10 | Mainly Beta › Beta Complex › Beta-clip-like › SET domain | 0.51 | 36.0 | 2.81e-01 | 76.9% | 67.7% |
| 2dnmA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 37.0 | 3.30e-01 | 81.5% | 82.5% |
| 4xvoA01 | 2.60.40.3710 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 34.0 | 3.11e-01 | 70.8% | 89.9% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.50 | 37.0 | 3.16e-01 | 89.2% | 96.4% |
| 4pcqA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.50 | 37.0 | 3.47e-01 | 81.5% | 85.7% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991500 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.91 | 85.0 | 7.63e-01 | 100.0% | 81.2% |
| 4976725 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.90 | 83.0 | 7.91e-01 | 100.0% | 90.7% |
| 4943792 | 229.1.1.12 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › AAA | 0.89 | 82.0 | 7.43e-01 | 100.0% | 80.0% |
| 4938646 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.89 | 82.0 | 7.60e-01 | 100.0% | 91.3% |
| 4935915 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.88 | 81.0 | 7.21e-01 | 100.0% | 92.2% |
| 5045457 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.88 | 81.0 | 7.36e-01 | 100.0% | 80.0% |
| 4927348 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.88 | 81.0 | 7.71e-01 | 100.0% | 92.0% |
| 4978260 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.88 | 81.0 | 7.53e-01 | 100.0% | 83.7% |
| 5042185 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.88 | 80.0 | 7.47e-01 | 100.0% | 85.0% |
| 4982744 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.88 | 80.0 | 7.61e-01 | 100.0% | 88.0% |
| 4940825 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.87 | 80.0 | 7.28e-01 | 100.0% | 78.8% |
| 5075127 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.87 | 81.0 | 7.48e-01 | 100.0% | 85.0% |
| 5078755 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.87 | 80.0 | 7.64e-01 | 100.0% | 89.3% |
| 4995599 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.87 | 79.0 | 7.36e-01 | 100.0% | 90.0% |
| 4994054 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.86 | 80.0 | 7.38e-01 | 100.0% | 87.5% |
| 3486352 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.86 | 79.0 | 7.04e-01 | 100.0% | 80.0% |
| 5045055 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.86 | 79.0 | 7.20e-01 | 100.0% | 78.8% |
| 4967109 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.86 | 79.0 | 7.56e-01 | 100.0% | 89.3% |
| 5026962 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.86 | 79.0 | 7.36e-01 | 100.0% | 87.5% |
| 5057265 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.86 | 79.0 | 7.32e-01 | 100.0% | 86.3% |
| 4980993 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.86 | 79.0 | 7.18e-01 | 100.0% | 85.9% |
| 5078747 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.86 | 78.0 | 7.29e-01 | 100.0% | 88.7% |
| 3177458 | 229.1.1.3 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX-1N | 0.86 | 78.0 | 7.25e-01 | 100.0% | 91.3% |
| 4340211 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.86 | 78.0 | 7.28e-01 | 100.0% | 83.7% |
| 5001339 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.85 | 78.0 | 7.28e-01 | 100.0% | 87.5% |
| 3596666 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.85 | 78.0 | 6.94e-01 | 100.0% | 80.0% |
| 5071198 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.85 | 79.0 | 7.47e-01 | 100.0% | 89.3% |
| 4928877 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.85 | 78.0 | 7.09e-01 | 100.0% | 81.2% |
| 3862274 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.85 | 78.0 | 6.93e-01 | 100.0% | 81.1% |
| 3516179 | 229.1.1.8 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 | 0.85 | 77.0 | 7.07e-01 | 100.0% | 83.3% |
| 4967959 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.85 | 77.0 | 7.37e-01 | 100.0% | 89.3% |
| 4931095 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.85 | 77.0 | 7.36e-01 | 100.0% | 88.0% |
| 4029158 | 229.1.1.8 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 | 0.85 | 77.0 | 7.18e-01 | 100.0% | 93.8% |
| 4024751 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.85 | 77.0 | 6.72e-01 | 100.0% | 82.1% |
| 4929938 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.85 | 77.0 | 7.02e-01 | 100.0% | 77.6% |
| 4976326 | 229.1.1.9 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PRS2_N | 0.84 | 77.0 | 6.68e-01 | 100.0% | 85.3% |
| 3605375 | 229.1.1.8 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 | 0.84 | 76.0 | 6.78e-01 | 100.0% | 88.9% |
| 4928939 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.83 | 76.0 | 6.92e-01 | 100.0% | 77.6% |
| 4021343 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.83 | 76.0 | 7.06e-01 | 100.0% | 91.3% |
| 5006793 | 229.1.1.9 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PRS2_N | 0.83 | 76.0 | 6.90e-01 | 100.0% | 90.6% |
| 4947976 | 229.1.1.12 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › AAA | 0.83 | 76.0 | 6.63e-01 | 100.0% | 84.2% |
| 5053342 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.83 | 76.0 | 7.26e-01 | 100.0% | 89.3% |
| 5050555 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.83 | 75.0 | 7.15e-01 | 100.0% | 89.3% |
| 3597195 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.83 | 75.0 | 6.69e-01 | 100.0% | 88.9% |
| 3427277 | 229.1.1.8 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 | 0.83 | 74.0 | 6.79e-01 | 100.0% | 82.4% |
| 4372907 | 229.1.1.9 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PRS2_N | 0.83 | 75.0 | 6.81e-01 | 100.0% | 92.9% |
| 5017605 | 229.1.1.9 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PRS2_N | 0.82 | 75.0 | 6.53e-01 | 100.0% | 83.2% |
| 3652467 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.82 | 75.0 | 6.21e-01 | 100.0% | 75.5% |
| 3669540 | 229.1.1.8 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › UFD1_N2 | 0.82 | 73.0 | 6.86e-01 | 100.0% | 87.5% |
| 3615553 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.82 | 75.0 | 6.02e-01 | 100.0% | 80.8% |
| 3257012 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.82 | 75.0 | 6.54e-01 | 100.0% | 85.3% |
| 5054457 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.82 | 74.0 | 6.48e-01 | 100.0% | 88.4% |
| 3594625 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.82 | 74.0 | 6.27e-01 | 100.0% | 81.0% |
| 4998502 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.82 | 74.0 | 7.04e-01 | 100.0% | 89.3% |
| 3481990 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.82 | 73.0 | 6.83e-01 | 100.0% | 90.0% |
| 3926809 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.82 | 74.0 | 6.62e-01 | 100.0% | 84.4% |
| 5077331 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.82 | 73.0 | 6.58e-01 | 100.0% | 93.3% |
| 4027678 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.82 | 74.0 | 6.17e-01 | 100.0% | 73.6% |
| 3784922 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.81 | 74.0 | 6.12e-01 | 100.0% | 84.5% |
| 3406946 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.81 | 72.0 | 6.25e-01 | 100.0% | 88.0% |
| 3492327 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.81 | 73.0 | 6.18e-01 | 100.0% | 81.0% |
| 3180800 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.80 | 73.0 | 6.07e-01 | 100.0% | 87.3% |
| 3993833 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.80 | 71.0 | 6.55e-01 | 100.0% | 94.1% |
| 3701561 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.80 | 73.0 | 6.61e-01 | 100.0% | 90.6% |
| 3167285 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.80 | 73.0 | 6.06e-01 | 100.0% | 82.7% |
| 3636770 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.80 | 72.0 | 6.10e-01 | 100.0% | 81.0% |
| 4963228 | 229.1.1.13 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PF25922 | 0.80 | 72.0 | 6.59e-01 | 100.0% | 92.9% |
| 3598454 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.80 | 72.0 | 6.11e-01 | 100.0% | 92.4% |
| 3685006 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.80 | 73.0 | 5.86e-01 | 100.0% | 82.5% |
| 3743745 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.80 | 72.0 | 6.00e-01 | 100.0% | 83.6% |
| 4991440 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.80 | 68.0 | 6.64e-01 | 100.0% | 87.1% |
| 4413380 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.79 | 72.0 | 6.32e-01 | 100.0% | 78.9% |
| 3884492 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.79 | 71.0 | 5.87e-01 | 100.0% | 80.0% |
| 3832949 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.79 | 71.0 | 6.35e-01 | 100.0% | 90.0% |
| 3412949 | 101.1.2.651 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF29595 | 0.79 | 71.0 | 6.60e-01 | 100.0% | 85.0% |
| 3933009 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.79 | 70.0 | 6.28e-01 | 100.0% | 94.4% |
| 4332528 | 229.1.1.10 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PF29595 | 0.78 | 69.0 | 6.63e-01 | 100.0% | 89.3% |
| 4509266 | 229.1.1.10 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PF29595 | 0.78 | 69.0 | 6.09e-01 | 100.0% | 80.0% |
| 3857417 | 1.1.2.42 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PF29595 | 0.78 | 69.0 | 6.61e-01 | 100.0% | 88.0% |
| 4501298 | 229.1.1.6 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PEX6_4th | 0.77 | 69.0 | 6.07e-01 | 100.0% | 85.3% |
| 165655 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.77 | 68.0 | 6.53e-01 | 100.0% | 86.8% |
| 3625789 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.77 | 68.0 | 5.90e-01 | 100.0% | 86.0% |
| 3166926 | 229.1.1.10 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PF29595 | 0.76 | 68.0 | 6.22e-01 | 100.0% | 78.8% |
| 3934737 | 229.1.1.10 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PF29595 | 0.76 | 68.0 | 6.65e-01 | 100.0% | 94.3% |
| 3211711 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.76 | 67.0 | 5.83e-01 | 100.0% | 82.0% |
| 3679539 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.76 | 67.0 | 6.30e-01 | 100.0% | 90.0% |
| 3214661 | 229.1.1.10 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › PF29595 | 0.76 | 67.0 | 6.42e-01 | 100.0% | 88.0% |
| 5045003 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.74 | 65.0 | 6.00e-01 | 100.0% | 91.8% |
| 3263241 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.70 | 62.0 | 5.47e-01 | 100.0% | 82.1% |
| 3777373 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.62 | 45.0 | 3.80e-01 | 80.0% | 91.7% |
| 4047960 | 304.16.1.1 ↗ | a+b two layers › Alpha-beta plaits › eEF-1beta-like › eEF-1beta-like › EF1_GNE | 0.51 | 37.0 | 3.44e-01 | 80.0% | 92.9% |