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IMGVR_UViG_3300025630_003131-3300025630-Ga0208004_10004959

Arc-Vir

IMGVR_UViG_3300025630_003131-3300025630-Ga0208004_10004959

Quality

78.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-91
PDB
Domain cluster: representative
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3riqA00 2.160.20.20 Mainly Beta › 3 Solenoid › Pectate Lyase C-like › 0.77 39.0 2.30e-01 96.3% 7.4%
2bhoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.69 43.0 3.87e-01 87.8% 46.4%
1iucA00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.68 47.0 3.16e-01 72.0% 42.6%
3k2tA01 3.30.505.50 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain 0.66 36.0 4.58e-01 100.0% 95.7%
1xksA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.65 46.0 2.95e-01 96.3% 16.3%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 32.0 3.72e-01 92.7% 65.6%
8f5pE01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 43.0 2.80e-01 70.7% 41.0%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.63 42.0 3.90e-01 86.6% 53.3%
2pm6D01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 46.0 3.16e-01 76.8% 31.4%
3fvzA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.62 44.0 2.92e-01 73.2% 27.1%
4nsxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 45.0 3.01e-01 76.8% 34.8%
3eweA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 46.0 3.24e-01 81.7% 31.8%
5hy7B02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 44.0 2.97e-01 78.0% 47.8%
2m7oA00 3.10.450.400 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Uncharacterised protein PF15513, DUF4651 0.60 42.0 4.45e-01 74.4% 90.0%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 43.0 2.88e-01 76.8% 23.0%
8adbA01 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.59 45.0 3.39e-01 91.5% 32.9%
1mg2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 42.0 2.76e-01 76.8% 45.8%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.58 40.0 3.67e-01 86.6% 54.1%
3c6kA01 3.30.160.110 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Sirohaem synthase, central domain 0.58 41.0 3.99e-01 97.6% 66.0%
1d06A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 42.0 3.61e-01 76.8% 63.8%
7tzoA01 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.56 44.0 3.49e-01 85.4% 53.4%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 36.0 4.00e-01 84.1% 87.1%
3cnwA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 44.0 3.67e-01 86.6% 64.5%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.55 42.0 4.06e-01 100.0% 72.3%
1zylA01 3.30.200.70 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.55 42.0 4.49e-01 81.7% 100.0%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 46.0 3.03e-01 91.5% 26.2%
1zxzB00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.54 48.0 3.67e-01 100.0% 61.8%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.54 38.0 3.58e-01 76.8% 65.4%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.53 46.0 3.20e-01 97.6% 88.0%
4f3nA00 3.40.50.12710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 40.0 2.68e-01 85.4% 73.0%
1f3zA00 2.70.70.10 Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) 0.52 47.0 3.84e-01 100.0% 81.3%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.52 32.0 2.97e-01 92.7% 49.5%
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 46.0 3.49e-01 98.8% 95.8%
3g5kA00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.51 45.0 3.54e-01 100.0% 64.5%
3cz8A02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.51 32.0 3.77e-01 93.9% 93.0%
6hoxA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.23e-01 100.0% 47.0%
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 40.0 3.28e-01 85.4% 56.0%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3639721 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.74 41.0 5.32e-01 86.6% 100.0%
3566394 4099.1.1.8 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › DUF4581 0.73 51.0 4.76e-01 79.3% 59.0%
4027676 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.70 48.0 3.04e-01 70.7% 30.9%
3612842 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 50.0 3.12e-01 76.8% 40.2%
3905749 5.1.5.105 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_IFT140_1st 0.68 46.0 2.94e-01 70.7% 33.8%
4014168 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.68 47.0 3.16e-01 73.2% 45.2%
3724547 4317.1.1.1 a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like › DUF1398 0.67 45.0 5.08e-01 86.6% 95.0%
3283891 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.65 51.0 5.26e-01 98.8% 92.0%
3587052 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.65 42.0 4.02e-01 89.0% 56.8%
3722351 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 47.0 3.02e-01 76.8% 40.8%
2049698 5.1.4.270 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd 0.64 45.0 3.00e-01 73.2% 36.9%
3255575 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 47.0 3.12e-01 78.0% 29.1%
3591439 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.63 48.0 3.15e-01 81.7% 24.5%
3608449 5.1.4.235 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st 0.63 43.0 2.72e-01 72.0% 49.9%
4026792 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.62 43.0 2.71e-01 70.7% 30.6%
3599654 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 46.0 2.64e-01 79.3% 15.5%
3554713 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 47.0 2.86e-01 96.3% 14.3%
3637832 206.1.1.11 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH 0.62 46.0 2.87e-01 78.0% 24.2%
1007197 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 48.0 4.97e-01 82.9% 93.4%
3251994 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 52.0 4.50e-01 98.8% 59.7%
3572103 220.1.1.74 beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.61 39.0 3.34e-01 72.0% 39.3%
3995053 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 47.0 2.98e-01 81.7% 35.8%
2968925 5.1.4.32 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.60 48.0 3.06e-01 86.6% 34.2%
3473170 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 46.0 2.82e-01 81.7% 24.3%
5053933 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 42.0 4.71e-01 81.7% 93.8%
4479376 241.2.1.1 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like › Frataxin_Cyay 0.59 40.0 3.64e-01 86.6% 50.4%
5039633 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.59 44.0 4.59e-01 79.3% 86.5%
3601400 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.59 48.0 2.97e-01 87.8% 83.0%
3783252 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 47.0 3.05e-01 86.6% 23.0%
3635669 4099.1.1.4 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O 0.58 43.0 3.89e-01 79.3% 73.9%
2576368 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.58 42.0 3.53e-01 76.8% 84.0%
4634997 5.1.4.17 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A,MMS1_N 0.58 43.0 2.46e-01 79.3% 22.4%
3896807 5.1.4.235 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st 0.58 44.0 2.82e-01 81.7% 28.4%
3499768 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 49.0 3.15e-01 91.5% 25.6%
4031999 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 43.0 4.27e-01 84.1% 77.6%
3502483 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 44.0 2.75e-01 81.7% 25.1%
4029690 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 44.0 2.51e-01 81.7% 12.2%
4028495 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 48.0 3.17e-01 91.5% 29.0%
3192378 4099.1.1.4 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O 0.57 43.0 3.97e-01 80.5% 71.4%
3953652 4317.1.1.0 a+b duplicates or obligate multimers › YdfO-like › YdfO-like › YdfO-like 0.57 40.0 4.37e-01 89.0% 93.8%
3393981 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 48.0 3.06e-01 91.5% 34.2%
5029476 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.57 43.0 3.33e-01 81.7% 47.6%
3391006 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 41.0 2.75e-01 96.3% 19.7%
3926511 5.1.5.36 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › CNH 0.56 39.0 2.71e-01 73.2% 43.1%
3606916 5.1.12.3 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › PERK and Ire1 luminal domains › WD40 0.55 46.0 3.06e-01 91.5% 32.4%
3535572 239.3.1.1 beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin 0.55 45.0 3.85e-01 100.0% 54.3%
3168874 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 45.0 2.98e-01 91.5% 39.4%
3884500 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.53 47.0 3.50e-01 100.0% 48.4%
3440362 289.1.1.1 a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase › Pep_deformylase 0.53 47.0 3.63e-01 100.0% 62.1%
3614697 5.1.4.39 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 0.53 43.0 2.75e-01 89.0% 37.8%
4454162 325.1.6.1 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PTS_EIIA_1 0.52 48.0 3.85e-01 100.0% 78.7%
5016556 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 38.0 3.72e-01 79.3% 77.8%
5039724 243.5.1.0 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region 0.52 42.0 4.05e-01 87.8% 88.4%
3398142 5.1.4.327 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_MABP1-WDR62_2nd 0.51 43.0 2.68e-01 92.7% 40.2%
3713177 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.51 43.0 2.86e-01 93.9% 43.4%
3238162 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 43.0 2.82e-01 91.5% 26.1%
3237828 331.9.1.9 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 0.51 46.0 4.15e-01 100.0% 81.8%
3763927 331.9.1.9 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 0.51 46.0 4.16e-01 100.0% 80.7%
3231481 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.51 40.0 3.09e-01 91.5% 42.8%
3582979 5.1.4.156 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ge1_WD40 0.50 43.0 2.77e-01 98.8% 95.4%
D2 medium residues 136-184
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1owfA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.81 57.0 4.54e-01 75.5% 44.8%
1ignB02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 65.0 5.40e-01 95.9% 54.3%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.78 67.0 5.56e-01 100.0% 54.4%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.78 70.0 4.94e-01 100.0% 44.8%
4n1vA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.77 54.0 4.41e-01 75.5% 48.4%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.77 67.0 5.39e-01 100.0% 59.8%
3dfgA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 6.14e-01 93.9% 93.8%
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.74 62.0 5.91e-01 95.9% 94.8%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.73 61.0 6.15e-01 100.0% 96.0%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 4.87e-01 95.9% 54.9%
2iieA01 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.71 51.0 3.99e-01 77.6% 43.5%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.85e-01 95.9% 57.6%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 57.0 5.29e-01 100.0% 72.1%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 4.70e-01 100.0% 68.0%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 4.87e-01 100.0% 60.0%
7p2yd01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.68 55.0 4.43e-01 91.8% 55.6%
3tjmA02 1.10.1470.20 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 0.68 58.0 4.82e-01 98.0% 67.8%
3mabA00 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.67 53.0 4.56e-01 91.8% 60.0%
3ol4A02 1.10.10.2390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 53.0 5.08e-01 95.9% 86.7%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 54.0 4.42e-01 100.0% 65.7%
1abvA00 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.66 54.0 4.42e-01 100.0% 91.4%
4z4qA04 1.10.268.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 0.66 55.0 4.66e-01 100.0% 56.2%
3qitB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.63 54.0 3.39e-01 100.0% 59.7%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 51.0 4.53e-01 95.9% 65.3%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.58 43.0 3.91e-01 83.7% 72.0%
3p2mA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 46.0 2.91e-01 93.9% 53.0%
2b0cA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.57 45.0 4.16e-01 91.8% 66.7%
2el7A02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.53 38.0 3.16e-01 77.6% 81.9%
1v9mA02 1.20.1690.10 Mainly Alpha › Up-down Bundle › V-type ATP synthase subunit C fold › V-type ATP synthase subunit C domain 0.53 42.0 3.51e-01 100.0% 61.4%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.52 40.0 3.90e-01 91.8% 85.7%
3otdA00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.52 42.0 2.81e-01 98.0% 20.4%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4501343 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.85 73.0 7.02e-01 93.9% 83.6%
4013216 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 72.0 6.79e-01 98.0% 91.7%
3657853 101.1.1.210 alpha arrays › HTH › HTH › Three-helical HTH › Cac1_C 0.82 71.0 6.54e-01 100.0% 89.2%
3590474 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 66.0 5.57e-01 100.0% 52.9%
3239718 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 65.0 5.95e-01 100.0% 67.7%
4942943 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.81 70.0 5.41e-01 100.0% 45.5%
3353864 101.1.2.212 alpha arrays › HTH › HTH › winged helix domain › Cac1_C 0.80 70.0 6.26e-01 100.0% 82.9%
3248091 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.80 67.0 5.56e-01 93.9% 65.9%
3249906 198.1.1.3 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 0.80 67.0 5.56e-01 93.9% 69.4%
3672635 101.1.1.295 alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 0.79 68.0 6.01e-01 100.0% 72.0%
4464648 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.79 63.0 5.80e-01 89.8% 69.2%
4304583 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 70.0 6.38e-01 100.0% 93.8%
5005264 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 67.0 4.60e-01 95.9% 28.5%
3992048 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 67.0 6.48e-01 98.0% 87.3%
3783147 101.1.2.212 alpha arrays › HTH › HTH › winged helix domain › Cac1_C 0.79 68.0 6.08e-01 100.0% 87.1%
4959424 103.6.1.0 alpha arrays › RuvA-C › FGAM synthase PurL, linker domain › FGAM synthase PurL, linker domain 0.78 69.0 6.69e-01 100.0% 96.4%
5002609 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 68.0 5.51e-01 100.0% 87.4%
3236431 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 66.0 5.92e-01 95.9% 70.0%
3800383 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 67.0 6.15e-01 100.0% 76.9%
1693526 2008.1.1.70 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_BsaWI 0.78 67.0 4.17e-01 100.0% 24.3%
4999433 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.78 66.0 6.63e-01 98.0% 96.0%
4998572 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 66.0 5.61e-01 100.0% 57.6%
4942265 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 68.0 5.68e-01 100.0% 61.2%
4406214 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.77 67.0 5.49e-01 100.0% 52.7%
3406014 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 65.0 6.03e-01 98.0% 73.8%
5079733 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 65.0 5.67e-01 100.0% 62.7%
3657981 198.1.1.16 alpha arrays › Saposin-like › Saposin-like › Saposin-like › HTH_70 0.77 66.0 5.68e-01 100.0% 78.8%
3714445 102.1.1.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.77 65.0 5.34e-01 95.9% 81.1%
4988076 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 63.0 5.80e-01 98.0% 77.9%
3725789 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 64.0 5.92e-01 100.0% 83.1%
3504507 610.3.1.3 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › tRNA_synt_1c_R1 0.75 62.0 4.23e-01 95.9% 30.3%
5025549 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 65.0 5.96e-01 100.0% 89.2%
3590074 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 63.0 4.79e-01 100.0% 44.0%
4506746 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.74 63.0 4.20e-01 95.9% 61.6%
3938065 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 65.0 5.67e-01 100.0% 93.3%
4973028 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 63.0 5.40e-01 95.9% 71.2%
3337658 610.3.1.3 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › tRNA_synt_1c_R1 0.73 61.0 4.17e-01 98.0% 29.2%
4176831 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 64.0 4.68e-01 100.0% 40.0%
5082043 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.73 58.0 4.35e-01 95.9% 35.7%
5025960 101.1.1.558 alpha arrays › HTH › HTH › Three-helical HTH › DUF7523 0.73 59.0 5.77e-01 91.8% 90.9%
5029743 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 62.0 5.08e-01 100.0% 72.6%
3455407 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 5.79e-01 95.9% 89.1%
4957643 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.73 61.0 3.87e-01 100.0% 20.0%
3454767 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 59.0 5.75e-01 95.9% 90.9%
4438233 101.35.1.5 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.72 59.0 4.61e-01 93.9% 42.9%
4931192 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 59.0 5.66e-01 98.0% 93.3%
3213565 198.1.1.1 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 0.71 61.0 5.38e-01 100.0% 77.3%
5045747 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 60.0 5.03e-01 100.0% 76.7%
3467989 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 58.0 5.55e-01 98.0% 83.3%
3518858 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 60.0 5.21e-01 100.0% 90.0%
4979742 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 58.0 5.04e-01 95.9% 62.5%
4953832 7000.1.1.0 alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS 0.70 59.0 5.79e-01 100.0% 94.5%
3584520 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 57.0 4.60e-01 100.0% 47.3%
4947212 601.7.1.0 alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.69 53.0 4.24e-01 83.7% 62.0%
3890162 101.1.2.526 alpha arrays › HTH › HTH › winged helix domain › PF27602 0.69 58.0 5.17e-01 100.0% 90.7%
5033536 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 56.0 4.53e-01 100.0% 60.0%
3573652 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 54.0 5.45e-01 95.9% 88.0%
5038818 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.69 56.0 3.57e-01 100.0% 17.9%
3390907 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 57.0 4.91e-01 100.0% 64.3%
5060198 101.1.2.894 alpha arrays › HTH › HTH › winged helix domain › DUF2240 0.67 57.0 5.41e-01 98.0% 100.0%
1164865 6058.1.1.1 alpha arrays › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › C-terminal alpha domain in Alpha-Glycerophosphate Oxidase › DAO_C 0.67 56.0 4.37e-01 95.9% 46.4%
3402551 101.1.2.75 alpha arrays › HTH › HTH › winged helix domain › TFIIF_alpha 0.67 52.0 4.95e-01 95.9% 73.8%
4271175 101.1.2.498 alpha arrays › HTH › HTH › winged helix domain › PF25870 0.66 54.0 4.06e-01 95.9% 40.7%
4995581 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.66 57.0 4.59e-01 100.0% 52.0%
5064866 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 54.0 4.36e-01 100.0% 65.5%
4390290 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.65 52.0 4.89e-01 98.0% 76.9%
3743396 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 54.0 4.58e-01 100.0% 66.7%
4531271 101.1.2.498 alpha arrays › HTH › HTH › winged helix domain › PF25870 0.65 55.0 3.97e-01 100.0% 50.7%
3781503 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 52.0 5.09e-01 100.0% 94.5%
3264673 101.1.2.498 alpha arrays › HTH › HTH › winged helix domain › PF25870 0.63 52.0 3.94e-01 98.0% 43.8%
4039740 3317.1.1.2 alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB 0.63 44.0 4.13e-01 75.5% 60.0%
4207615 170.2.1.28 alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain › PNMA 0.63 48.0 4.46e-01 85.7% 78.5%
3598925 1021.1.1.0 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases 0.62 43.0 3.21e-01 77.6% 27.7%
3428642 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.61 46.0 4.52e-01 87.8% 94.5%
3897956 198.1.1.18 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapA, SapB_2, SapB_1, Saposin 0.59 46.0 3.69e-01 95.9% 54.8%
3598713 541.1.1.0 alpha duplicates or obligate multimers › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit › Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit 0.57 37.0 3.84e-01 71.4% 75.6%
3686518 101.1.2.384 alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-bind_8 0.55 45.0 4.41e-01 98.0% 87.3%
D3 medium residues 197-246
PDB
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1owfA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.80 54.0 4.38e-01 72.0% 44.8%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.79 69.0 5.70e-01 100.0% 55.6%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.79 69.0 5.56e-01 100.0% 58.8%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 57.0 5.85e-01 92.0% 89.4%
7ar7E01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.76 58.0 5.39e-01 84.0% 68.3%
1o4xA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 60.0 5.88e-01 100.0% 85.2%
1zq3P00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 61.0 5.52e-01 100.0% 69.1%
7s03A01 1.10.10.1450 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.73 63.0 6.40e-01 100.0% 100.0%
3dfgA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 6.01e-01 94.0% 97.9%
1akhB00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 61.0 5.37e-01 100.0% 69.2%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.71 60.0 4.93e-01 100.0% 51.0%
3e3vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.53e-01 90.0% 88.7%
2dn0A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 58.0 5.16e-01 98.0% 63.2%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 59.0 5.14e-01 100.0% 60.3%
1b72A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 58.0 5.39e-01 98.0% 73.5%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.70 58.0 4.81e-01 96.0% 80.0%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 58.0 5.26e-01 100.0% 67.6%
2e19A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 57.0 5.81e-01 100.0% 97.9%
3fdiB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 54.0 3.73e-01 88.0% 72.1%
1le8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 57.0 5.67e-01 98.0% 90.6%
1e3oC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 52.0 5.34e-01 84.0% 87.5%
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 5.54e-01 88.0% 91.7%
1ci4A00 1.10.150.40 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Barrier-to-autointegration factor, BAF 0.69 57.0 4.87e-01 98.0% 79.5%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 5.04e-01 90.0% 72.9%
2mgqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 56.0 5.21e-01 100.0% 73.5%
2ecbA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 55.0 5.57e-01 100.0% 98.0%
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 54.0 5.24e-01 94.0% 93.1%
4z4qA04 1.10.268.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 0.68 53.0 4.55e-01 100.0% 51.7%
5zzjA02 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.67 53.0 3.34e-01 92.0% 30.6%
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 46.0 4.74e-01 98.0% 77.1%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 52.0 5.31e-01 92.0% 97.9%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 5.14e-01 100.0% 100.0%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 4.56e-01 100.0% 73.3%
8h6qD01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.64 50.0 3.14e-01 92.0% 32.2%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 4.69e-01 100.0% 91.6%
2qgnA02 1.10.287.890 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 0.62 43.0 3.74e-01 90.0% 46.3%
2ld7B00 1.20.1160.11 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › Paired amphipathic helix 0.61 45.0 4.07e-01 84.0% 70.7%
2b0cA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.61 50.0 4.60e-01 92.0% 71.2%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.61 50.0 3.67e-01 100.0% 77.4%
3e7qA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 48.0 3.33e-01 100.0% 28.8%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 50.0 4.52e-01 100.0% 81.9%
2wvxA01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 42.0 2.66e-01 80.0% 80.3%
2b4lA02 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.58 48.0 3.42e-01 94.0% 36.3%
3bhgA01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.58 39.0 3.16e-01 74.0% 46.1%
2gxaE01 1.10.10.510 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain 0.57 46.0 4.22e-01 100.0% 84.9%
1pulA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 41.0 3.29e-01 78.0% 56.3%
4g9qA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.56 44.0 3.03e-01 100.0% 60.9%
1iwpA00 3.20.20.350 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Diol/glycerol dehydratase, large subunit 0.55 45.0 2.60e-01 100.0% 53.3%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.54 41.0 2.75e-01 100.0% 18.8%
1ic8A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.54 41.0 3.42e-01 86.0% 51.1%
3er6A00 3.40.50.880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain 0.52 39.0 2.74e-01 82.0% 98.4%
2z0fA03 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.52 37.0 2.88e-01 78.0% 84.4%
2vqxA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.52 40.0 3.03e-01 100.0% 67.7%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4300463 101.1.1.217 alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C 0.89 67.0 7.31e-01 84.0% 100.0%
4983508 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 75.0 6.69e-01 98.0% 70.0%
4944767 101.1.2.883 alpha arrays › HTH › HTH › winged helix domain › Radical_SAM 0.83 71.0 6.23e-01 98.0% 65.3%
4938693 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.82 70.0 5.94e-01 100.0% 57.6%
3970291 101.1.1.217 alpha arrays › HTH › HTH › Three-helical HTH › RsmI_C 0.82 64.0 6.66e-01 90.0% 95.6%
4449615 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.82 72.0 5.93e-01 100.0% 56.7%
4995680 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.82 71.0 6.71e-01 98.0% 90.0%
4999433 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.82 70.0 7.07e-01 96.0% 96.0%
5082787 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.81 70.0 5.62e-01 100.0% 51.0%
4554621 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.80 70.0 5.81e-01 100.0% 56.2%
4048893 101.17.1.1 alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.80 55.0 4.90e-01 72.0% 60.0%
5067099 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.80 68.0 5.03e-01 100.0% 40.7%
4406214 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.79 70.0 5.71e-01 100.0% 53.8%
3704050 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 59.0 5.92e-01 84.0% 84.0%
4997093 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 66.0 5.76e-01 100.0% 82.3%
4683209 2004.1.1.80 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin 0.77 63.0 4.07e-01 88.0% 79.4%
3239643 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 66.0 6.10e-01 98.0% 75.4%
3243491 101.1.1.289 alpha arrays › HTH › HTH › Three-helical HTH › HOCHOB 0.77 64.0 6.08e-01 96.0% 80.0%
3236431 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 63.0 5.70e-01 96.0% 72.9%
5079733 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 5.63e-01 100.0% 65.3%
3886164 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.75 60.0 6.09e-01 100.0% 92.0%
4379527 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.75 65.0 5.50e-01 100.0% 58.8%
3935738 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.75 63.0 6.01e-01 98.0% 83.3%
4932241 2007.1.2.56 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › DUF116 0.74 64.0 4.38e-01 100.0% 98.9%
4224260 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 60.0 4.91e-01 96.0% 48.4%
3994687 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.74 60.0 5.90e-01 96.0% 85.5%
3996572 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.73 56.0 5.87e-01 86.0% 95.6%
4983598 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 61.0 5.69e-01 96.0% 81.5%
3495504 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 60.0 6.02e-01 96.0% 94.0%
3333472 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.73 62.0 5.48e-01 98.0% 66.7%
4929672 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 64.0 4.86e-01 100.0% 46.7%
4927335 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.73 60.0 4.24e-01 92.0% 65.3%
3994528 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.73 60.0 5.66e-01 100.0% 76.7%
3538312 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.73 59.0 6.00e-01 96.0% 94.0%
4275568 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.73 62.0 5.61e-01 100.0% 77.1%
3802428 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.72 59.0 5.17e-01 96.0% 59.5%
3897740 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.72 60.0 4.99e-01 98.0% 52.6%
4928641 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.72 61.0 5.46e-01 100.0% 66.7%
3842636 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 62.0 5.59e-01 100.0% 75.7%
3854655 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.72 58.0 5.87e-01 96.0% 94.0%
3243459 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 61.0 5.86e-01 100.0% 83.3%
3815745 592.6.1.1 alpha arrays › PWI domain-like › Pre-mRNA-splicing helicase BRR2 plug domain › Pre-mRNA-splicing helicase BRR2 plug domain › BRR2_plug 0.72 59.0 5.20e-01 100.0% 61.3%
3623357 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.72 61.0 5.96e-01 100.0% 90.9%
3847051 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.72 61.0 5.19e-01 100.0% 63.5%
4599923 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 60.0 5.45e-01 98.0% 71.4%
4586835 101.1.1.36 alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.72 61.0 5.62e-01 98.0% 81.5%
3218376 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 56.0 5.64e-01 90.0% 90.0%
3844546 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 60.0 5.43e-01 98.0% 71.4%
3535807 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 60.0 5.43e-01 98.0% 71.4%
3751844 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 59.0 4.92e-01 98.0% 52.6%
3582723 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 60.0 5.43e-01 98.0% 71.4%
3499033 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 59.0 5.78e-01 98.0% 90.9%
3483962 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 59.0 4.98e-01 98.0% 55.6%
3231816 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 55.0 5.29e-01 90.0% 76.7%
3792126 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 59.0 4.87e-01 98.0% 52.6%
3783785 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 60.0 5.43e-01 98.0% 70.0%
3932555 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 58.0 5.16e-01 98.0% 64.0%
3768461 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 59.0 5.08e-01 100.0% 61.2%
1175749 101.1.2.145 alpha arrays › HTH › HTH › winged helix domain › HHH_4 0.70 58.0 4.97e-01 96.0% 88.4%
3796365 101.1.1.421 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain, CUT 0.70 60.0 4.07e-01 100.0% 27.7%
3513561 101.1.1.36 alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.70 57.0 5.17e-01 96.0% 67.1%
3478184 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 59.0 4.80e-01 98.0% 49.0%
163004 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 58.0 5.26e-01 100.0% 67.6%
4998572 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 58.0 5.02e-01 100.0% 60.0%
3911740 101.1.1.36 alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.70 58.0 5.73e-01 98.0% 96.4%
3211563 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 58.0 5.18e-01 98.0% 66.7%
3523991 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 58.0 5.32e-01 98.0% 71.4%
3220096 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 58.0 5.18e-01 98.0% 66.7%
3341091 101.35.1.6 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › A_thal_3526 0.69 55.0 5.13e-01 96.0% 70.8%
3244523 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 55.0 5.50e-01 98.0% 92.0%
3240028 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 57.0 5.61e-01 100.0% 90.9%
3767171 101.1.1.36 alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.69 57.0 4.78e-01 100.0% 53.7%
3227458 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 53.0 5.10e-01 90.0% 75.0%
4258338 101.35.1.5 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.69 55.0 4.39e-01 94.0% 43.6%
4213222 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.68 57.0 5.35e-01 100.0% 79.7%
3217696 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 56.0 5.28e-01 100.0% 78.5%
3997838 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.68 57.0 5.36e-01 100.0% 80.0%
4438233 101.35.1.5 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 0.68 53.0 4.29e-01 90.0% 44.8%
4979355 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 58.0 4.58e-01 100.0% 60.9%
3589794 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 53.0 5.31e-01 92.0% 98.0%
3560402 101.1.1.36 alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN 0.67 52.0 4.95e-01 98.0% 70.8%
4928472 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.67 54.0 4.82e-01 100.0% 62.5%
5053497 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 54.0 5.18e-01 96.0% 83.3%
3542830 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.65 53.0 5.02e-01 98.0% 76.9%
3727621 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 53.0 4.60e-01 96.0% 68.8%
3168643 592.1.1.2 alpha arrays › PWI domain-like › PWI domain › PWI domain › Helicase_PWI 0.61 47.0 4.08e-01 100.0% 51.6%
4998573 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.60 48.0 4.20e-01 100.0% 84.4%
3801526 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 46.0 3.06e-01 100.0% 26.4%