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IMGVR_UViG_3300025631_000951-3300025631-Ga0209204_100330712
Arc-VirIMGVR_UViG_3300025631_000951-3300025631-Ga0209204_100330712
Identity
- Kingdom:
- archaea
Quality
84.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-65
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rylA00 | 3.40.1760.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › YfbM-like super family | 0.71 | 59.0 | 4.34e-01 | 96.6% | 35.0% |
| 2knaA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.66 | 39.0 | 4.12e-01 | 78.0% | 64.8% |
| 1r4vA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.64 | 53.0 | 3.96e-01 | 93.2% | 80.8% |
| 1td6A03 | 1.10.472.40 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3 | 0.56 | 40.0 | 3.55e-01 | 78.0% | 52.2% |
| 4ri6A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 39.0 | 3.19e-01 | 88.1% | 89.9% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3294780 | 3755.3.1.375 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF4079 | 0.75 | 47.0 | 3.39e-01 | 71.2% | 25.3% |
| 3900796 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.74 | 52.0 | 3.89e-01 | 72.9% | 80.7% |
| 3704169 | 3285.1.1.0 ↗ | alpha duplicates or obligate multimers › Alix V domain › Alix V domain › Alix V domain | 0.74 | 51.0 | 3.35e-01 | 79.7% | 17.9% |
| 3619546 | 3712.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 | 0.69 | 60.0 | 5.80e-01 | 94.9% | 89.2% |
| 4947978 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 42.0 | 4.38e-01 | 86.4% | 78.2% |
| 5010150 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.61 | 50.0 | 3.59e-01 | 93.2% | 30.0% |
| 3730471 | 4982.1.1.4 ↗ | alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › SYS1 | 0.58 | 47.0 | 3.78e-01 | 100.0% | 95.6% |