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IMGVR_UViG_3300025632_000018-3300025632-Ga0209194_100018199

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300025632_000018-3300025632-Ga0209194_100018199 ↗
Kingdom:: archaea

Quality

96.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-77

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF23907.2 best	DUF7249	82.6	4.30e-23	100.0%	85.4%

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
7qaqA01	3.40.50.11710	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase	0.66	49.0	3.41e-01	77.9%	47.9%
2v9kA01	1.10.10.2050	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.66	45.0	5.00e-01	88.2%	98.0%
1k78I00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.61	44.0	4.69e-01	89.7%	93.1%
1x4qA01	1.20.1390.10	Mainly Alpha › Up-down Bundle › PWI domain › PWI domain	0.59	45.0	4.47e-01	95.6%	80.3%
6lcuA02	1.10.10.470	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Maltooligosyl trehalose synthase; domain 4	0.57	47.0	4.17e-01	97.1%	68.6%
2q0iA00	3.60.15.10	Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	0.55	48.0	3.20e-01	100.0%	46.3%
8b6jF01	1.10.287.20	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain	0.54	37.0	3.75e-01	70.6%	88.1%
2wjwA01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.54	47.0	3.40e-01	100.0%	66.8%
4fcyA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.54	36.0	3.51e-01	82.4%	61.5%
3ilvA02	3.40.50.620	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs	0.54	43.0	2.83e-01	91.2%	35.8%
2ijeS00	1.10.840.10	Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain	0.53	41.0	2.93e-01	88.2%	80.6%
2oi8A00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.53	43.0	3.16e-01	94.1%	46.8%
3pamB00	3.10.105.10	Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3	0.52	38.0	2.65e-01	79.4%	30.4%
2raaA00	3.40.920.10	Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III	0.51	39.0	3.00e-01	94.1%	33.1%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4028411	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.65	51.0	5.26e-01	98.5%	92.3%
3886268	3919.1.1.0 ↗	alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9	0.63	54.0	4.65e-01	97.1%	90.0%
3396827	3919.1.1.2 ↗	alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN	0.61	50.0	4.37e-01	94.1%	80.0%
3603105	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.58	40.0	3.97e-01	91.2%	66.7%
5074500	5051.1.1.10 ↗	alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2	0.53	39.0	2.45e-01	82.4%	59.1%