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IMGVR_UViG_3300025638_000813-3300025638-Ga0208198_10077207
Arc-VirIMGVR_UViG_3300025638_000813-3300025638-Ga0208198_10077207
Identity
- Kingdom:
- archaea
Quality
93.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-98
Domain cluster:
rep: IMGVR_UViG_3300010311_001043-3300010311-Ga0116254_10069981__D4-80
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09334.18 best | tRNA-synt_1g | 123.1 | 1.70e-35 | 99.0% | 23.5% |
| PF00133.29 | tRNA-synt_1 | 38.9 | 6.50e-10 | 99.0% | 19.6% |
D2
high
residues 125-186
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09334.18 best | tRNA-synt_1g | 77.4 | 1.30e-21 | 100.0% | 15.9% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rqgA02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.86 | 78.0 | 5.72e-01 | 100.0% | 40.3% |
| 3kflA02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.76 | 50.0 | 3.88e-01 | 100.0% | 34.7% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 36.0 | 3.64e-01 | 71.0% | 92.1% |
| 1twfI02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 33.0 | 3.17e-01 | 95.2% | 53.9% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 40.0 | 3.82e-01 | 87.1% | 98.6% |
| 1ou8A00 | 2.30.30.220 | Mainly Beta › Roll › SH3 type barrels. › SspB-like | 0.52 | 43.0 | 3.77e-01 | 100.0% | 96.2% |
| 6xw5A01 | 2.40.510.10 | Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses | 0.51 | 36.0 | 2.72e-01 | 75.8% | 99.4% |
| 1vx7N01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 36.0 | 3.39e-01 | 79.0% | 67.1% |
| 3ii1A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 34.0 | 2.14e-01 | 71.0% | 44.0% |
| 6xi7B02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.50 | 28.0 | 3.16e-01 | 88.7% | 79.5% |
| 3meuB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 37.0 | 3.62e-01 | 83.9% | 93.2% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 1.00 | 95.0 | 5.74e-01 | 100.0% | 19.1% | |
| 4886011 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 1.00 | 92.0 | 9.38e-01 | 96.8% | 98.3% |
| 4969313 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.99 | 95.0 | 9.03e-01 | 100.0% | 88.6% |
| 4017623 | 375.1.1.46 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g | 0.99 | 95.0 | 8.31e-01 | 100.0% | 91.8% |
| 3641849 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.99 | 95.0 | 5.69e-01 | 100.0% | 19.1% |
| 4217322 | 375.1.1.46 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g | 0.98 | 94.0 | 8.99e-01 | 100.0% | 88.6% |
| 4274505 | 375.1.1.232 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g, PF27618 | 0.98 | 92.0 | 9.08e-01 | 98.4% | 93.8% |
| 4348494 | 375.1.1.46 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g | 0.98 | 93.0 | 5.61e-01 | 100.0% | 18.5% |
| 4992984 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.98 | 93.0 | 5.63e-01 | 100.0% | 19.1% |
| 4619228 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.97 | 92.0 | 5.60e-01 | 100.0% | 19.4% |
| 4946096 | 375.1.1.46 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g | 0.97 | 91.0 | 8.94e-01 | 98.4% | 96.9% |
| 4079564 | 2005.1.1.40 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1+tRNA-synt_1g | 0.97 | 92.0 | 5.56e-01 | 100.0% | 19.1% |
| 4312482 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.96 | 92.0 | 5.44e-01 | 100.0% | 16.5% |
| 4090045 | 375.1.1.46 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g | 0.96 | 90.0 | 8.63e-01 | 100.0% | 88.6% |
| 4980850 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.94 | 88.0 | 5.32e-01 | 100.0% | 17.7% |
| 4941128 | 375.1.1.46 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1g | 0.93 | 87.0 | 8.56e-01 | 100.0% | 95.4% |
| 4310743 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.83 | 53.0 | 6.21e-01 | 100.0% | 91.1% |
| 3229548 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 48.0 | 5.53e-01 | 100.0% | 93.3% |
| 3177203 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.73 | 48.0 | 5.50e-01 | 100.0% | 93.3% |
| 3205074 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 48.0 | 5.23e-01 | 100.0% | 86.0% |
| 4249207 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.60 | 41.0 | 4.43e-01 | 96.8% | 88.0% |
| 4205352 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.60 | 42.0 | 4.51e-01 | 98.4% | 90.0% |
| 5073888 | 4.1.2.2 ↗ | beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 | 0.54 | 44.0 | 4.12e-01 | 93.5% | 88.7% |
| 3814411 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 38.0 | 3.34e-01 | 79.0% | 61.0% |
| 3547102 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 39.0 | 3.63e-01 | 82.3% | 65.9% |
| 4317035 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 39.0 | 3.59e-01 | 80.6% | 69.4% |
| 4044129 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.53 | 41.0 | 4.20e-01 | 100.0% | 88.3% |
| 4999705 | 4.1.2.2 ↗ | beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 | 0.53 | 43.0 | 3.80e-01 | 93.5% | 74.7% |
| 4151645 | 4.1.1.301 ↗ | beta barrels › SH3 › SH3 › SH3 › MJ1316 | 0.52 | 43.0 | 4.12e-01 | 93.5% | 88.0% |
| 3486329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 39.0 | 3.88e-01 | 85.5% | 98.5% |
| 5077562 | 4.1.2.2 ↗ | beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 | 0.52 | 42.0 | 4.05e-01 | 93.5% | 85.3% |
| 3571064 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 37.0 | 3.45e-01 | 80.6% | 68.2% |
| 4946420 | 376.1.1.180 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ResIII | 0.51 | 33.0 | 3.31e-01 | 100.0% | 63.1% |
| 4795746 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 41.0 | 3.26e-01 | 100.0% | 51.6% |
| 4068345 | 4.1.2.2 ↗ | beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › MJ1316 | 0.51 | 43.0 | 3.97e-01 | 93.5% | 86.3% |
D3
medium
residues 193-224
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rqgA02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.96 | 83.0 | 5.18e-01 | 100.0% | 20.1% |
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.91 | 77.0 | 6.33e-01 | 96.9% | 61.4% |
| 2ynqB00 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.84 | 70.0 | 4.53e-01 | 100.0% | 26.5% |
| 2cazD00 | 6.10.140.820 | Special › Helix non-globular › Helix Hairpins › | 0.82 | 66.0 | 5.50e-01 | 96.9% | 60.0% |
| 2d54A02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.82 | 67.0 | 4.70e-01 | 100.0% | 30.6% |
| 4nv0A02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.81 | 67.0 | 5.05e-01 | 100.0% | 39.0% |
| 3i5pA03 | 1.20.120.1880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleoporin, helical C-terminal domain | 0.79 | 65.0 | 3.87e-01 | 100.0% | 13.1% |
| 2bduA02 | 1.10.150.340 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain | 0.78 | 63.0 | 4.93e-01 | 96.9% | 60.8% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 64.0 | 5.18e-01 | 100.0% | 71.6% |
| 4hteA03 | 1.10.167.30 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › | 0.76 | 59.0 | 4.62e-01 | 100.0% | 38.7% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.75 | 56.0 | 4.50e-01 | 93.8% | 41.6% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 56.0 | 4.18e-01 | 100.0% | 32.4% |
| 2zt5A02 | 3.30.40.230 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.72 | 54.0 | 4.29e-01 | 100.0% | 38.1% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.71 | 52.0 | 4.27e-01 | 100.0% | 40.5% |
| 1s5jA04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.71 | 53.0 | 4.65e-01 | 100.0% | 54.1% |
| 3tufA00 | 1.10.287.4300 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like | 0.69 | 52.0 | 3.76e-01 | 100.0% | 27.8% |
| 1z8fA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 54.0 | 3.79e-01 | 100.0% | 67.8% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.68 | 49.0 | 3.97e-01 | 100.0% | 37.2% |
| 1t16A00 | 2.40.160.60 | Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) | 0.66 | 51.0 | 2.89e-01 | 100.0% | 7.7% |
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 46.0 | 3.43e-01 | 90.6% | 64.9% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.53 | 42.0 | 3.21e-01 | 96.9% | 41.9% |
| 7nc3F01 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 40.0 | 3.00e-01 | 100.0% | 57.0% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.51 | 37.0 | 3.10e-01 | 100.0% | 62.1% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3822870 | 605.1.1.169 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › TMEM120A-B | 0.94 | 83.0 | 5.59e-01 | 96.9% | 33.3% |
| 3992791 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.94 | 82.0 | 5.67e-01 | 96.9% | 34.7% |
| 3673226 | 622.2.1.0 ↗ | alpha bundles › YvfG-like › YvfG-like › YvfG-like | 0.93 | 83.0 | 6.85e-01 | 100.0% | 60.0% |
| 3774606 | 109.4.1.2221 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tho2, Thoc2 | 0.89 | 77.0 | 4.11e-01 | 100.0% | 31.0% |
| 3921001 | 109.4.1.1472 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Tho2, Thoc2, THOC2_N | 0.89 | 77.0 | 4.04e-01 | 100.0% | 22.2% |
| 4009690 | 7523.1.1.25 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Phosphonate-bd | 0.89 | 78.0 | 4.71e-01 | 100.0% | 23.6% |
| 4229998 | 109.28.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › EssB extracellular domain › EssB extracellular domain › YukC | 0.89 | 76.0 | 4.97e-01 | 100.0% | 23.7% |
| 4660205 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.89 | 78.0 | 5.03e-01 | 100.0% | 24.4% |
| 4034449 | 109.28.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › EssB extracellular domain › EssB extracellular domain › YukC | 0.88 | 76.0 | 4.84e-01 | 100.0% | 29.3% |
| 3921951 | 632.8.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 | 0.88 | 73.0 | 5.36e-01 | 96.9% | 41.2% |
| 3717682 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.88 | 76.0 | 4.59e-01 | 100.0% | 35.5% |
| 3834200 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.88 | 73.0 | 5.67e-01 | 96.9% | 50.0% |
| 4027013 | 1134.1.1.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain | 0.86 | 72.0 | 6.16e-01 | 100.0% | 72.7% |
| 3201044 | 7087.1.1.1 ↗ | alpha bundles › Emopamil binding protein (EBP) transmembrane domain › Emopamil binding protein (EBP) transmembrane domain › Emopamil binding protein (EBP) transmembrane domain › EBP | 0.86 | 73.0 | 4.60e-01 | 100.0% | 74.1% |
| 3876519 | 101.1.5.3 ↗ | alpha arrays › HTH › HTH › Anti-sigma factor AsiA › PF27581 | 0.85 | 67.0 | 5.01e-01 | 93.8% | 37.6% |
| 4452302 | 605.1.1.162 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › COX4_pro | 0.85 | 68.0 | 4.90e-01 | 96.9% | 36.8% |
| 3172784 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.84 | 69.0 | 4.85e-01 | 100.0% | 32.4% |
| 4026047 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.83 | 68.0 | 5.06e-01 | 96.9% | 36.5% |
| 3223457 | 101.1.2.661 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_9, POLR3C_WHD | 0.82 | 70.0 | 4.06e-01 | 100.0% | 61.4% |
| 3582573 | 192.24.1.0 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain | 0.82 | 70.0 | 4.82e-01 | 100.0% | 69.1% |
| 3389059 | 4082.1.1.1 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange | 0.82 | 64.0 | 5.51e-01 | 93.8% | 58.2% |
| 4928588 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 65.0 | 4.47e-01 | 96.9% | 25.8% |
| 3857708 | 109.3.1.444 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Tmemb_185A | 0.79 | 64.0 | 3.80e-01 | 100.0% | 12.1% |
| 3181110 | 5086.1.1.110 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HisKA | 0.79 | 66.0 | 4.76e-01 | 100.0% | 34.7% |
| 3962863 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.76 | 58.0 | 4.40e-01 | 100.0% | 33.7% |
| 3716130 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.76 | 61.0 | 3.69e-01 | 100.0% | 13.6% |
| 3509502 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.76 | 62.0 | 6.13e-01 | 100.0% | 91.4% |
| 4957605 | 5076.2.1.13 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF7847 | 0.75 | 55.0 | 3.43e-01 | 93.8% | 14.5% |
| 3679700 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.74 | 54.0 | 3.89e-01 | 93.8% | 27.8% |
| 3596101 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.74 | 57.0 | 3.48e-01 | 100.0% | 12.8% |
| 3519973 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.74 | 56.0 | 3.45e-01 | 100.0% | 13.1% |
| 3956826 | 150.8.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE | 0.73 | 58.0 | 3.79e-01 | 100.0% | 44.1% |
| 3930816 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.73 | 58.0 | 3.48e-01 | 96.9% | 11.6% |
| 4029616 | 306.9.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › MecA substrate binding domain › MecA substrate binding domain | 0.73 | 56.0 | 4.56e-01 | 96.9% | 42.9% |
| 3235839 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.72 | 53.0 | 3.50e-01 | 100.0% | 18.3% |
| 3630104 | 192.24.1.6 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.72 | 56.0 | 3.21e-01 | 96.9% | 9.2% |
| 3592341 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.70 | 52.0 | 3.24e-01 | 100.0% | 13.3% |
| 4453815 | 192.12.1.1 ↗ | alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM › Prok-TraM | 0.70 | 52.0 | 4.03e-01 | 100.0% | 33.7% |
| 3566807 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.69 | 50.0 | 4.50e-01 | 100.0% | 53.3% |
| 3678192 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.69 | 52.0 | 3.55e-01 | 96.9% | 22.0% |
| 4003615 | 5054.1.1.59 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans, Ion_trans_2 | 0.68 | 50.0 | 3.15e-01 | 100.0% | 14.2% |
| 3705837 | 192.12.1.5 ↗ | alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM › Cmc1 | 0.66 | 48.0 | 3.91e-01 | 100.0% | 37.6% |
| 3399070 | 4082.1.1.1 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange | 0.66 | 47.0 | 4.41e-01 | 100.0% | 58.2% |
| 4428645 | 3826.1.1.80 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › GrpE | 0.66 | 51.0 | 4.36e-01 | 93.8% | 78.3% |
| 3890044 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.66 | 48.0 | 4.13e-01 | 100.0% | 73.5% |
| 4032379 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.64 | 45.0 | 3.87e-01 | 100.0% | 44.0% |
| 3848560 | 109.4.1.1226 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_KNTC1_3rd | 0.64 | 45.0 | 2.66e-01 | 100.0% | 9.7% |
| 3801220 | 206.1.1.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase,FATC | 0.63 | 49.0 | 2.78e-01 | 96.9% | 7.3% |
| 3789670 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 44.0 | 2.73e-01 | 100.0% | 11.2% |
| 3402423 | 4082.1.1.1 ↗ | alpha duplicates or obligate multimers › Hairy Orange domain › Hairy Orange domain › Hairy Orange domain › Hairy_orange | 0.61 | 43.0 | 4.06e-01 | 100.0% | 58.2% |
| 4142579 | 3718.1.1.26 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › RICH | 0.57 | 43.0 | 3.38e-01 | 100.0% | 33.0% |
| 4264100 | 3718.1.1.0 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT | 0.55 | 42.0 | 3.39e-01 | 100.0% | 34.7% |