←Back to structures
IMGVR_UViG_3300025644_000027-3300025644-Ga0209042_10015332
Arc-VirIMGVR_UViG_3300025644_000027-3300025644-Ga0209042_10015332
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-68
Domain cluster:
rep: BML_coassembly_scaffold_69_prodigal-single.1__X__X__00423__D4-64
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jiiA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.71 | 42.0 | 3.49e-01 | 100.0% | 35.5% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.68 | 44.0 | 4.74e-01 | 98.5% | 78.6% |
| 3edsA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.64 | 56.0 | 4.54e-01 | 100.0% | 62.4% |
| 4dywA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.62 | 53.0 | 4.36e-01 | 100.0% | 64.3% |
| 3n77A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.61 | 51.0 | 4.14e-01 | 100.0% | 66.7% |
| 1ryaA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.60 | 51.0 | 3.99e-01 | 100.0% | 56.9% |
| 4xsgB00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.59 | 46.0 | 3.36e-01 | 89.6% | 98.5% |
| 1dfaA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.58 | 51.0 | 3.65e-01 | 98.5% | 91.1% |
| 6ixyA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 48.0 | 3.95e-01 | 100.0% | 98.5% |
| 3kbgA02 | 2.40.50.740 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain | 0.56 | 33.0 | 3.64e-01 | 82.1% | 73.6% |
| 2aqjA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 44.0 | 2.65e-01 | 91.0% | 63.1% |
| 3on7B00 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.53 | 40.0 | 2.75e-01 | 85.1% | 83.1% |
| 2xvsA00 | 2.40.50.550 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 36.0 | 2.78e-01 | 74.6% | 84.3% |
| 2x8xX03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.51 | 43.0 | 4.12e-01 | 100.0% | 94.0% |
| 4zi9A01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.51 | 36.0 | 3.21e-01 | 74.6% | 100.0% |
| 2ra9A02 | 2.30.270.10 | Mainly Beta › Roll › duf1285 protein fold › duf1285 protein | 0.50 | 37.0 | 3.62e-01 | 91.0% | 74.0% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4021511 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 46.0 | 4.41e-01 | 100.0% | 60.0% |
| 4298531 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.67 | 59.0 | 4.96e-01 | 100.0% | 81.7% |
| 3253266 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 50.0 | 4.30e-01 | 85.1% | 61.0% |
| 3902239 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.63 | 54.0 | 4.10e-01 | 100.0% | 49.1% |
| 3784453 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.63 | 53.0 | 4.14e-01 | 100.0% | 75.0% |
| 3598222 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 40.0 | 3.97e-01 | 70.1% | 62.9% |
| 3722166 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.62 | 51.0 | 4.20e-01 | 98.5% | 51.3% |
| 3286004 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.61 | 52.0 | 4.11e-01 | 100.0% | 59.3% |
| 4013718 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.61 | 51.0 | 3.90e-01 | 100.0% | 66.3% |
| 3929267 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.60 | 48.0 | 3.95e-01 | 98.5% | 48.3% |
| 3932485 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.59 | 45.0 | 3.77e-01 | 100.0% | 48.7% |
| 4179803 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.57 | 38.0 | 2.84e-01 | 70.1% | 52.5% |
| 3731145 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.57 | 46.0 | 3.80e-01 | 98.5% | 48.0% |
| 3937060 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.57 | 45.0 | 4.05e-01 | 98.5% | 61.1% |
| 3513377 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.57 | 45.0 | 3.89e-01 | 98.5% | 55.2% |
| 3514852 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.56 | 45.0 | 3.94e-01 | 98.5% | 57.1% |
| 4939497 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.56 | 49.0 | 4.00e-01 | 97.0% | 72.8% |
| 3931384 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.56 | 45.0 | 3.88e-01 | 98.5% | 54.5% |
| 3576838 | 2.1.1.138 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › ATG11 | 0.56 | 50.0 | 4.29e-01 | 100.0% | 62.9% |
| 3253267 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 42.0 | 3.97e-01 | 85.1% | 74.1% |
| 3832887 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.55 | 45.0 | 4.18e-01 | 98.5% | 71.1% |
| 3929755 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.55 | 46.0 | 3.74e-01 | 98.5% | 48.5% |
| 4021618 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.55 | 46.0 | 4.40e-01 | 98.5% | 80.0% |
| 3652079 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.54 | 43.0 | 3.61e-01 | 100.0% | 51.3% |
| 3512351 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.54 | 42.0 | 3.82e-01 | 100.0% | 62.1% |
| 4112343 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.54 | 40.0 | 3.34e-01 | 100.0% | 44.0% |
| 3506518 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.53 | 41.0 | 3.63e-01 | 100.0% | 55.2% |
| 3504233 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.53 | 38.0 | 3.43e-01 | 100.0% | 53.0% |
| 3362676 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.52 | 42.0 | 3.38e-01 | 100.0% | 43.6% |
| 4934542 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.51 | 30.0 | 2.82e-01 | 76.1% | 42.4% |
| 5075769 | 56.2.1.1 ↗ | beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT | 0.51 | 40.0 | 4.09e-01 | 100.0% | 89.2% |
| 3784046 | 59.1.2.1 ↗ | beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C › RNase_H2_suC | 0.50 | 42.0 | 3.47e-01 | 100.0% | 72.6% |
| 3956719 | 4252.1.1.14 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › PF30556 | 0.50 | 41.0 | 3.20e-01 | 100.0% | 75.4% |