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IMGVR_UViG_3300025644_000115-3300025644-Ga0209042_100421812
Arc-VirIMGVR_UViG_3300025644_000115-3300025644-Ga0209042_100421812
Identity
- Kingdom:
- archaea
Quality
68.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 61-136
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1sr2A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.84 | 71.0 | 6.11e-01 | 90.8% | 69.0% |
| 1nzeA00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.82 | 72.0 | 6.32e-01 | 96.1% | 87.5% |
| 3u8vA00 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.82 | 68.0 | 6.66e-01 | 89.5% | 97.6% |
| 1wn0A00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.82 | 75.0 | 6.17e-01 | 100.0% | 68.7% |
| 3dzaA01 | 1.20.120.1940 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YfdX protein domain | 0.80 | 63.0 | 5.39e-01 | 84.2% | 82.9% |
| 3iqtA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.80 | 72.0 | 6.26e-01 | 100.0% | 77.2% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.79 | 71.0 | 6.52e-01 | 100.0% | 85.0% |
| 4i1mB01 | 1.20.120.1700 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.79 | 72.0 | 5.97e-01 | 100.0% | 89.1% |
| 2d4uB00 | 1.20.120.30 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain | 0.76 | 69.0 | 5.42e-01 | 100.0% | 93.5% |
| 1lm3B00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.76 | 66.0 | 5.93e-01 | 96.1% | 98.1% |
| 3fajA00 | 1.20.120.950 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 | 0.76 | 68.0 | 6.14e-01 | 97.4% | 99.0% |
| 1cpqA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.75 | 68.0 | 5.70e-01 | 100.0% | 93.0% |
| 6a3kA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.75 | 67.0 | 5.63e-01 | 100.0% | 90.7% |
| 3rfyA02 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.75 | 67.0 | 5.97e-01 | 100.0% | 96.3% |
| 2oo2A00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.74 | 58.0 | 5.85e-01 | 81.6% | 84.2% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.74 | 65.0 | 5.66e-01 | 100.0% | 87.4% |
| 3caxA01 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.74 | 65.0 | 4.71e-01 | 100.0% | 56.2% |
| 1bbhA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.73 | 65.0 | 5.45e-01 | 100.0% | 91.6% |
| 1xg2B00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.73 | 63.0 | 4.96e-01 | 93.4% | 73.5% |
| 1h6gA01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.73 | 64.0 | 5.57e-01 | 100.0% | 100.0% |
| 1cgnA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.72 | 65.0 | 5.53e-01 | 100.0% | 94.4% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.72 | 56.0 | 5.60e-01 | 81.6% | 92.1% |
| 4od4A02 | 1.20.120.1780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase | 0.71 | 63.0 | 5.42e-01 | 98.7% | 99.2% |
| 3fmsA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.71 | 58.0 | 4.75e-01 | 89.5% | 91.5% |
| 1q0gA00 | 1.20.120.400 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nickel-containing superoxide dismutase | 0.70 | 60.0 | 5.32e-01 | 98.7% | 94.9% |
| 4w8pA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.70 | 60.0 | 5.16e-01 | 100.0% | 83.1% |
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.69 | 54.0 | 5.49e-01 | 84.2% | 92.0% |
| 2xq9A02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.69 | 60.0 | 5.19e-01 | 100.0% | 89.3% |
| 3c7jA02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.66 | 59.0 | 4.73e-01 | 98.7% | 99.3% |
| 5dqqA01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.65 | 56.0 | 4.79e-01 | 100.0% | 83.6% |
| 2ot4A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.64 | 51.0 | 4.54e-01 | 85.5% | 81.3% |
| 3l1nA02 | 1.20.1280.140 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.64 | 39.0 | 3.74e-01 | 96.1% | 52.9% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.64 | 51.0 | 5.24e-01 | 89.5% | 91.7% |
| 6vq6G02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.62 | 56.0 | 4.19e-01 | 100.0% | 89.1% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.61 | 55.0 | 4.89e-01 | 100.0% | 98.1% |
| 3iq1B00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.57 | 50.0 | 3.96e-01 | 100.0% | 69.8% |
| 7zh0A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.55 | 42.0 | 2.69e-01 | 82.9% | 19.2% |
| 7dfeA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.55 | 40.0 | 3.52e-01 | 81.6% | 74.0% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3587850 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.89 | 82.0 | 6.57e-01 | 100.0% | 90.7% |
| 4974664 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.87 | 81.0 | 6.83e-01 | 100.0% | 88.3% |
| 4949854 | 601.18.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 | 0.86 | 79.0 | 6.83e-01 | 100.0% | 92.9% |
| 5069603 | 601.18.1.30 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › Cytochrom_C_asm | 0.84 | 78.0 | 6.48e-01 | 100.0% | 85.6% |
| 4989900 | 1030.1.1.0 ↗ | alpha duplicates or obligate multimers › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 › Crispr-associated protein Csm2 | 0.84 | 77.0 | 6.28e-01 | 100.0% | 71.9% |
| 3346328 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.83 | 77.0 | 6.09e-01 | 100.0% | 63.4% |
| 3311111 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.83 | 76.0 | 6.07e-01 | 100.0% | 62.9% |
| 5030859 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.83 | 75.0 | 6.40e-01 | 100.0% | 85.8% |
| 3354384 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.81 | 74.0 | 6.07e-01 | 100.0% | 66.7% |
| 3625640 | 601.1.1.98 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › PF27524 | 0.81 | 73.0 | 5.72e-01 | 100.0% | 76.8% |
| 4045134 | 601.4.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › 4HB_MCP_1 | 0.80 | 73.0 | 6.04e-01 | 100.0% | 84.6% |
| 4994051 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.80 | 72.0 | 6.30e-01 | 100.0% | 97.3% |
| 5011492 | 601.3.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › RIP_P131-like | 0.79 | 65.0 | 6.11e-01 | 88.2% | 96.7% |
| 3823125 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.78 | 61.0 | 4.83e-01 | 82.9% | 62.0% |
| 3932046 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.78 | 57.0 | 5.34e-01 | 76.3% | 97.8% |
| 4674043 | 632.11.1.12 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › UVR | 0.76 | 61.0 | 5.79e-01 | 85.5% | 97.8% |
| 3433568 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.76 | 65.0 | 5.06e-01 | 92.1% | 72.9% |
| 3644752 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.75 | 55.0 | 4.35e-01 | 78.9% | 55.0% |
| 4085203 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.75 | 61.0 | 4.97e-01 | 85.5% | 77.7% |
| 4465966 | 632.11.1.10 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › EzrA | 0.74 | 60.0 | 4.87e-01 | 84.2% | 78.5% |
| 4927307 | 632.11.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DUF357 | 0.74 | 58.0 | 5.64e-01 | 82.9% | 95.3% |
| 4085606 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.73 | 59.0 | 5.15e-01 | 85.5% | 91.8% |
| 5069833 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.73 | 55.0 | 5.44e-01 | 78.9% | 77.5% |
| 4995204 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.73 | 53.0 | 5.52e-01 | 75.0% | 87.1% |
| 5059272 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.73 | 59.0 | 6.02e-01 | 85.5% | 88.0% |
| 5028028 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.73 | 58.0 | 4.70e-01 | 84.2% | 80.7% |
| 4982049 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.73 | 51.0 | 6.00e-01 | 76.3% | 100.0% |
| 5068969 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.73 | 59.0 | 6.15e-01 | 85.5% | 95.7% |
| 4938440 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.73 | 58.0 | 5.29e-01 | 85.5% | 96.0% |
| 4942424 | 632.11.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › DUF357 | 0.72 | 57.0 | 5.75e-01 | 81.6% | 92.0% |
| 5044068 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.72 | 58.0 | 5.39e-01 | 85.5% | 91.6% |
| 5069041 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.72 | 58.0 | 6.24e-01 | 86.8% | 98.5% |
| 4959128 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.72 | 59.0 | 5.95e-01 | 85.5% | 97.3% |
| 5068187 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.72 | 54.0 | 5.49e-01 | 77.6% | 82.4% |
| 3407424 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.71 | 54.0 | 4.80e-01 | 81.6% | 81.8% |
| 5014265 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.71 | 59.0 | 5.64e-01 | 86.8% | 96.5% |
| 4983663 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.71 | 58.0 | 5.56e-01 | 85.5% | 97.6% |
| 5014266 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.71 | 56.0 | 5.67e-01 | 84.2% | 90.7% |
| 4941191 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.70 | 57.0 | 4.99e-01 | 85.5% | 87.3% |
| 5030865 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.70 | 58.0 | 5.91e-01 | 86.8% | 96.0% |
| 4295514 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.70 | 56.0 | 5.01e-01 | 85.5% | 83.8% |
| 3459621 | 3826.1.1.0 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) | 0.70 | 56.0 | 5.10e-01 | 85.5% | 85.0% |
| 4927171 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.70 | 56.0 | 5.27e-01 | 85.5% | 92.2% |
| 3444036 | 601.1.1.91 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF1218 | 0.69 | 60.0 | 5.16e-01 | 100.0% | 95.2% |
| 3693444 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.69 | 64.0 | 4.82e-01 | 100.0% | 64.7% |
| 3205696 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.67 | 47.0 | 3.81e-01 | 100.0% | 40.7% |
| 4934609 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 61.0 | 5.05e-01 | 100.0% | 96.2% |
| 3399566 | 3937.1.1.4 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › PIEZO | 0.64 | 56.0 | 3.78e-01 | 100.0% | 83.0% |
| 4019030 | 5086.1.1.12 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Uds1 | 0.63 | 51.0 | 4.73e-01 | 90.8% | 89.0% |
| 4947851 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.61 | 56.0 | 4.44e-01 | 100.0% | 91.3% |
| 4945112 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.60 | 55.0 | 4.21e-01 | 100.0% | 77.0% |
| 3929700 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.59 | 50.0 | 3.46e-01 | 100.0% | 58.6% |
| 3281443 | 180.1.1.5 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2_3 | 0.58 | 51.0 | 3.49e-01 | 98.7% | 88.3% |
| 3287765 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.55 | 43.0 | 3.78e-01 | 89.5% | 93.6% |
| 3578336 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.55 | 47.0 | 4.34e-01 | 93.4% | 87.4% |
| 4286656 | 140.1.1.11 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 | 0.54 | 44.0 | 3.95e-01 | 90.8% | 63.6% |
| 3273688 | 3711.1.1.0 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein | 0.52 | 43.0 | 3.25e-01 | 94.7% | 78.5% |
D2
medium
residues 145-193
Domain cluster:
representative
CATH (78)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pyfA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.83 | 75.0 | 5.36e-01 | 100.0% | 93.4% |
| 1fo0B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 64.0 | 4.85e-01 | 100.0% | 58.9% |
| 2h6cA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.72 | 55.0 | 4.16e-01 | 100.0% | 33.3% |
| 5eb9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 62.0 | 4.74e-01 | 100.0% | 61.6% |
| 6mjjC01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 62.0 | 4.72e-01 | 100.0% | 57.0% |
| 5e44A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.70 | 58.0 | 4.11e-01 | 100.0% | 30.8% |
| 1pzxA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.70 | 54.0 | 4.06e-01 | 85.7% | 77.0% |
| 4pjeE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 61.0 | 4.73e-01 | 100.0% | 60.2% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.69 | 58.0 | 4.81e-01 | 100.0% | 78.9% |
| 1pm4A00 | 2.60.120.510 | Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm | 0.69 | 56.0 | 4.29e-01 | 100.0% | 38.5% |
| 4ev0D01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 58.0 | 4.18e-01 | 100.0% | 33.6% |
| 5d2lE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 61.0 | 4.68e-01 | 100.0% | 59.3% |
| 1o5lA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 59.0 | 4.30e-01 | 100.0% | 36.4% |
| 1jhjA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.68 | 60.0 | 4.16e-01 | 100.0% | 32.9% |
| 1hw5A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.68 | 59.0 | 4.31e-01 | 100.0% | 36.4% |
| 2m2dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 59.0 | 4.46e-01 | 100.0% | 55.9% |
| 3dv8A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 58.0 | 4.18e-01 | 100.0% | 34.5% |
| 4l1dC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 58.0 | 4.52e-01 | 100.0% | 61.5% |
| 3uesA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.67 | 54.0 | 4.13e-01 | 100.0% | 37.7% |
| 3fx3B01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 56.0 | 4.06e-01 | 100.0% | 33.8% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.67 | 55.0 | 5.11e-01 | 100.0% | 77.3% |
| 3iwzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 57.0 | 4.14e-01 | 100.0% | 35.1% |
| 1t3yA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.66 | 51.0 | 3.81e-01 | 100.0% | 32.1% |
| 3dn7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 57.0 | 4.06e-01 | 100.0% | 33.1% |
| 2zcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 54.0 | 4.18e-01 | 100.0% | 41.1% |
| 6kxkG01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.65 | 57.0 | 4.19e-01 | 100.0% | 40.6% |
| 4gxbA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.65 | 54.0 | 4.45e-01 | 98.0% | 67.0% |
| 2j1aA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.65 | 55.0 | 4.00e-01 | 100.0% | 34.0% |
| 2olgA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 54.0 | 4.10e-01 | 100.0% | 88.4% |
| 1etb200 | 2.60.40.180 | Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain | 0.65 | 56.0 | 4.28e-01 | 100.0% | 43.6% |
| 2pqqA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 55.0 | 3.89e-01 | 100.0% | 31.3% |
| 1hqz800 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.65 | 56.0 | 4.14e-01 | 100.0% | 43.9% |
| 2kd7A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.64 | 57.0 | 3.97e-01 | 100.0% | 32.1% |
| 2z04B03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.64 | 46.0 | 3.17e-01 | 79.6% | 79.0% |
| 2xhkB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 55.0 | 4.13e-01 | 100.0% | 39.0% |
| 2z69B00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 54.0 | 3.82e-01 | 100.0% | 31.3% |
| 1djsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 54.0 | 4.36e-01 | 100.0% | 51.0% |
| 4j2gA00 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.64 | 53.0 | 3.48e-01 | 91.8% | 71.3% |
| 2mv2A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.64 | 53.0 | 3.88e-01 | 100.0% | 33.8% |
| 7pzaA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 53.0 | 3.97e-01 | 100.0% | 37.7% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.63 | 51.0 | 3.71e-01 | 100.0% | 31.7% |
| 1q8mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 53.0 | 4.06e-01 | 98.0% | 55.4% |
| 3rj2X00 | 2.60.120.1150 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 53.0 | 3.98e-01 | 100.0% | 36.8% |
| 4e4tA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.61 | 44.0 | 3.06e-01 | 83.7% | 38.6% |
| 4lplA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 51.0 | 3.80e-01 | 100.0% | 39.4% |
| 2h1yA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.61 | 48.0 | 4.48e-01 | 98.0% | 94.3% |
| 5xnrA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.60 | 51.0 | 3.85e-01 | 100.0% | 38.6% |
| 1xffA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.60 | 47.0 | 3.16e-01 | 100.0% | 19.7% |
| 4chkB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.59 | 43.0 | 3.49e-01 | 98.0% | 41.8% |
| 3bn6A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 49.0 | 3.54e-01 | 100.0% | 36.7% |
| 1js8B02 | 2.60.310.10 | Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › Haemocyanin C-terminal domain | 0.59 | 50.0 | 4.01e-01 | 100.0% | 61.0% |
| 2jdaB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.59 | 50.0 | 3.67e-01 | 100.0% | 35.2% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 49.0 | 4.06e-01 | 100.0% | 51.0% |
| 3fw6A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.59 | 46.0 | 3.62e-01 | 100.0% | 38.5% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.58 | 50.0 | 3.80e-01 | 100.0% | 51.7% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 46.0 | 3.70e-01 | 100.0% | 44.6% |
| 2orzA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 45.0 | 3.37e-01 | 100.0% | 59.1% |
| 4jx0A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 46.0 | 3.49e-01 | 100.0% | 37.8% |
| 3wqbA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.56 | 48.0 | 3.39e-01 | 100.0% | 43.4% |
| 1yudA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 44.0 | 3.24e-01 | 100.0% | 29.7% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 47.0 | 3.38e-01 | 100.0% | 44.2% |
| 4mamB03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.55 | 49.0 | 3.26e-01 | 100.0% | 35.6% |
| 3hcyA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.55 | 39.0 | 2.97e-01 | 81.6% | 44.1% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 43.0 | 3.37e-01 | 100.0% | 43.9% |
| 1wapA00 | 2.60.40.50 | Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like | 0.54 | 42.0 | 4.00e-01 | 100.0% | 86.8% |
| 2lw3A00 | 2.60.40.2880 | Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain | 0.54 | 44.0 | 3.73e-01 | 98.0% | 75.6% |
| 2i02A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 42.0 | 3.26e-01 | 100.0% | 39.3% |
| 1dyqA02 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 41.0 | 3.15e-01 | 95.9% | 47.2% |
| 4limA00 | 3.90.920.10 | Alpha Beta › Alpha-Beta Complex › DNA primase, PRIM domain › DNA primase, PRIM domain | 0.52 | 44.0 | 2.68e-01 | 100.0% | 91.3% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 40.0 | 3.51e-01 | 100.0% | 63.5% |
| 5mj6A03 | 2.60.40.1910 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 3.57e-01 | 100.0% | 57.5% |
| 1rfeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 40.0 | 3.18e-01 | 100.0% | 47.1% |
| 3fmaA00 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.52 | 38.0 | 3.46e-01 | 100.0% | 54.3% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 40.0 | 3.16e-01 | 100.0% | 42.2% |
| 4ekuA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 38.0 | 3.18e-01 | 98.0% | 66.7% |
| 2f4nB02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.51 | 39.0 | 3.32e-01 | 91.8% | 70.2% |
| 6kxkB02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.50 | 40.0 | 3.12e-01 | 100.0% | 98.5% |
| 2bkfA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 37.0 | 3.44e-01 | 98.0% | 90.4% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5054505 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.83 | 74.0 | 6.04e-01 | 100.0% | 98.9% |
| 3510118 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.74 | 62.0 | 5.94e-01 | 100.0% | 80.0% |
| 4572126 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.73 | 61.0 | 4.23e-01 | 100.0% | 29.0% |
| 3509495 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.72 | 56.0 | 4.17e-01 | 100.0% | 33.6% |
| 3775960 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.71 | 55.0 | 4.13e-01 | 100.0% | 33.6% |
| 4000593 | 11.1.4.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 | 0.70 | 62.0 | 4.71e-01 | 100.0% | 43.6% |
| 149114 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.70 | 62.0 | 4.76e-01 | 100.0% | 59.1% |
| 3671921 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.70 | 54.0 | 5.27e-01 | 85.7% | 78.2% |
| 3558087 | 11.1.1.217 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Izumo-Ig | 0.69 | 57.0 | 4.52e-01 | 100.0% | 43.8% |
| 3956157 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.69 | 57.0 | 4.06e-01 | 100.0% | 31.0% |
| 4028022 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.69 | 57.0 | 4.21e-01 | 100.0% | 34.8% |
| 3490466 | 73.1.1.6 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › IRF-3 | 0.66 | 56.0 | 4.17e-01 | 98.0% | 43.7% |
| 3588802 | 10.12.1.1 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding | 0.66 | 57.0 | 3.95e-01 | 100.0% | 30.3% |
| 3971902 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.66 | 56.0 | 4.03e-01 | 100.0% | 33.6% |
| 3498932 | 10.32.1.73 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › BetaGal_ABD_1 | 0.65 | 52.0 | 3.90e-01 | 100.0% | 34.6% |
| 3969518 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 56.0 | 4.50e-01 | 100.0% | 53.0% |
| 4961648 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 57.0 | 4.07e-01 | 100.0% | 44.8% |
| 6800 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.65 | 57.0 | 4.10e-01 | 100.0% | 36.0% |
| 3734885 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.64 | 53.0 | 3.32e-01 | 100.0% | 16.9% |
| 3741841 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 56.0 | 4.31e-01 | 100.0% | 45.2% |
| 3925553 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 55.0 | 4.14e-01 | 100.0% | 65.4% |
| 4971848 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.62 | 55.0 | 3.40e-01 | 100.0% | 69.7% |
| 5041711 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 49.0 | 4.54e-01 | 95.9% | 100.0% |
| 3821996 | 10.32.1.192 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID | 0.61 | 53.0 | 3.23e-01 | 100.0% | 18.8% |
| 3496218 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.61 | 53.0 | 3.51e-01 | 100.0% | 26.0% |
| 3615237 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.60 | 48.0 | 2.99e-01 | 100.0% | 16.7% |
| 5070409 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.60 | 48.0 | 4.20e-01 | 100.0% | 60.2% |
| 5080205 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.59 | 48.0 | 4.85e-01 | 100.0% | 98.0% |
| 3805853 | 10.32.1.192 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID | 0.59 | 49.0 | 3.38e-01 | 100.0% | 32.8% |
| 3700754 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.59 | 51.0 | 3.61e-01 | 100.0% | 43.1% |
| None | — | 0.59 | 49.0 | 2.83e-01 | 100.0% | 8.8% | |
| 4029119 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 48.0 | 2.92e-01 | 95.9% | 13.7% |
| 4028489 | 224.1.1.1 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Cofilin_ADF | 0.59 | 51.0 | 3.78e-01 | 100.0% | 42.3% |
| 3231131 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 49.0 | 3.96e-01 | 100.0% | 56.2% |
| 3406668 | 11.1.1.536 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 | 0.59 | 51.0 | 3.59e-01 | 100.0% | 54.4% |
| 4937253 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.58 | 50.0 | 3.86e-01 | 100.0% | 51.3% |
| 3278920 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.58 | 45.0 | 3.12e-01 | 87.8% | 92.0% |
| None | — | 0.57 | 47.0 | 4.31e-01 | 93.9% | 100.0% | |
| 3390323 | 11.1.1.536 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF1091 | 0.57 | 47.0 | 3.40e-01 | 100.0% | 55.7% |
| 3332191 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 41.0 | 2.86e-01 | 81.6% | 80.5% |
| 4943472 | 3662.1.1.0 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related | 0.56 | 43.0 | 3.45e-01 | 85.7% | 63.8% |
| 143003 | 205.1.1.19 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_13 | 0.56 | 46.0 | 4.23e-01 | 93.9% | 100.0% |
| 5052820 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 49.0 | 3.27e-01 | 100.0% | 48.4% |
| 3277542 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 47.0 | 3.37e-01 | 100.0% | 61.9% |
| 5021979 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.55 | 46.0 | 3.61e-01 | 100.0% | 91.3% |
| 4971260 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 48.0 | 3.52e-01 | 100.0% | 62.3% |
| 3515029 | 223.2.1.46 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_N, FNIP_M | 0.54 | 49.0 | 3.41e-01 | 100.0% | 52.7% |
| 4463006 | 3115.2.1.0 ↗ | a+b two layers › GP2-like › GP2 › GP2 | 0.54 | 40.0 | 4.11e-01 | 91.8% | 95.6% |
| 5053654 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 47.0 | 3.56e-01 | 100.0% | 62.5% |
| 4943853 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 47.0 | 3.38e-01 | 100.0% | 58.6% |
| 5018490 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.53 | 36.0 | 2.81e-01 | 71.4% | 72.8% |
| 4996769 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 47.0 | 3.51e-01 | 100.0% | 77.5% |
| 3969006 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.52 | 39.0 | 3.93e-01 | 100.0% | 100.0% |
| 4958151 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.52 | 46.0 | 3.52e-01 | 100.0% | 93.0% |
| 4433457 | 205.1.1.20 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_15 | 0.52 | 41.0 | 3.85e-01 | 91.8% | 100.0% |
| 5046747 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.52 | 47.0 | 2.76e-01 | 100.0% | 26.6% |
| 3250715 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 46.0 | 3.14e-01 | 100.0% | 54.7% |
| 4004704 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.52 | 39.0 | 4.03e-01 | 100.0% | 100.0% |
D3
medium
residues 197-238
D4
medium
residues 244-296
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bg3A04 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.77 | 52.0 | 5.46e-01 | 96.2% | 78.7% |
| 3bg5B07 | 1.10.10.2790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.74 | 51.0 | 5.41e-01 | 96.2% | 82.6% |
| 3fgxA00 | 3.30.2220.10 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171 | 0.64 | 47.0 | 3.94e-01 | 94.3% | 44.8% |
| 7ahfA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.61 | 48.0 | 3.55e-01 | 88.7% | 71.2% |
| 1lp1A00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.60 | 48.0 | 4.82e-01 | 98.1% | 87.3% |
| 2k85A00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.57 | 40.0 | 3.85e-01 | 84.9% | 63.1% |
| 3s63A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.57 | 42.0 | 3.57e-01 | 81.1% | 47.7% |
| 1ne2B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 43.0 | 3.12e-01 | 96.2% | 91.8% |
| 3ehfD01 | 1.20.5.1930 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 37.0 | 3.53e-01 | 79.2% | 87.3% |
| 1nklA00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.50 | 37.0 | 3.33e-01 | 81.1% | 62.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3617913 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.64 | 43.0 | 4.42e-01 | 83.0% | 76.0% |
| 3727900 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.63 | 50.0 | 3.96e-01 | 94.3% | 40.0% |
| 3467310 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.61 | 46.0 | 4.56e-01 | 92.5% | 83.1% |
| 3899661 | 103.1.1.2 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CUE | 0.59 | 44.0 | 4.28e-01 | 92.5% | 73.3% |
| 3596734 | 574.1.1.0 ↗ | alpha bundles › Surp module (SWAP domain) › Surp module (SWAP domain) › Surp module (SWAP domain) | 0.54 | 38.0 | 3.19e-01 | 73.6% | 95.8% |