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IMGVR_UViG_3300025644_000248-3300025644-Ga0209042_100537113
Arc-VirIMGVR_UViG_3300025644_000248-3300025644-Ga0209042_100537113
Identity
- Kingdom:
- archaea
Quality
71.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 226-321
Domain cluster:
rep: IMGVR_UViG_3300005520_000196-3300005520-Ga0066864_100047611__D25-128
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.78 | 73.0 | 5.57e-01 | 100.0% | 74.4% |
| 3szeA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.70 | 65.0 | 4.47e-01 | 100.0% | 57.8% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 42.0 | 4.17e-01 | 77.1% | 62.5% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.60 | 37.0 | 3.93e-01 | 87.5% | 69.8% |
| 1g7sA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 45.0 | 4.34e-01 | 81.2% | 75.9% |
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 48.0 | 4.66e-01 | 89.6% | 88.7% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 38.0 | 3.91e-01 | 75.0% | 69.2% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 29.0 | 3.46e-01 | 89.6% | 73.0% |
| 6fezA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.56 | 43.0 | 4.41e-01 | 89.6% | 86.2% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.56 | 46.0 | 3.82e-01 | 89.6% | 51.2% |
| 1xe1A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 40.0 | 4.15e-01 | 100.0% | 80.2% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.52 | 43.0 | 4.33e-01 | 100.0% | 93.7% |
| 1krlA00 | 6.20.50.130 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.51 | 24.0 | 3.07e-01 | 82.3% | 84.1% |
| 2pn5A03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 35.0 | 3.42e-01 | 79.2% | 65.7% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3545090 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.77 | 73.0 | 5.39e-01 | 100.0% | 71.4% |
| 3772106 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.77 | 73.0 | 5.35e-01 | 100.0% | 69.8% |
| 3276425 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.76 | 72.0 | 4.94e-01 | 100.0% | 74.3% |
| 3509860 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.69 | 63.0 | 4.52e-01 | 100.0% | 78.1% |
| 3512547 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.67 | 61.0 | 4.88e-01 | 97.9% | 91.1% |
| 3504295 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.66 | 61.0 | 5.07e-01 | 100.0% | 90.6% |
| 3510772 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.64 | 60.0 | 4.81e-01 | 100.0% | 71.4% |
| 4960051 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.64 | 59.0 | 4.79e-01 | 100.0% | 93.1% |
| 4956775 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.61 | 45.0 | 4.51e-01 | 79.2% | 75.0% |
| 3699067 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.61 | 45.0 | 4.50e-01 | 79.2% | 75.0% |
| 3407711 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.61 | 45.0 | 4.51e-01 | 79.2% | 75.0% |
| 3520204 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.60 | 44.0 | 4.34e-01 | 79.2% | 71.4% |
| 3178567 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 45.0 | 4.52e-01 | 94.8% | 81.0% |
| 3974369 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 43.0 | 4.56e-01 | 95.8% | 90.6% |
| 3961663 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.57 | 43.0 | 4.26e-01 | 82.3% | 77.1% |
| 3782416 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 41.0 | 2.71e-01 | 78.1% | 85.4% |
| 4098870 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.55 | 36.0 | 3.67e-01 | 89.6% | 67.4% |
| 3416626 | 206.1.1.71 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo | 0.54 | 39.0 | 2.71e-01 | 77.1% | 90.7% |
| 3243980 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 39.0 | 2.73e-01 | 78.1% | 92.3% |
| 3395676 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 39.0 | 2.72e-01 | 78.1% | 91.1% |
| 3196565 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.53 | 39.0 | 2.82e-01 | 80.2% | 66.0% |
| 4383895 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 38.0 | 2.74e-01 | 79.2% | 49.0% |
| 3944430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.51 | 45.0 | 4.45e-01 | 100.0% | 90.5% |
| 4981806 | 1.1.9.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › SRA_ScoMcrA | 0.51 | 44.0 | 4.04e-01 | 100.0% | 94.8% |
| 3511720 | 60.1.2.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C | 0.51 | 41.0 | 2.97e-01 | 89.6% | 61.4% |
D2
medium
residues 92-188
Domain cluster:
rep: IMGVR_UViG_3300041980_000130-3300041980-Ga0453240_003114_3_1175__D319-391