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IMGVR_UViG_3300025660_000425-3300025660-Ga0209045_10097653
Arc-VirIMGVR_UViG_3300025660_000425-3300025660-Ga0209045_10097653
Identity
- Kingdom:
- archaea
Quality
82.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 88-161
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f98A00 | 2.30.140.50 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Protein of unknown function DUF2790 | 0.58 | 33.0 | 3.57e-01 | 83.8% | 66.1% |
| 1fu1A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.53 | 38.0 | 3.26e-01 | 74.3% | 78.0% |
| 1tqzA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 34.0 | 2.95e-01 | 100.0% | 39.0% |
| 5h9kA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 38.0 | 2.96e-01 | 75.7% | 38.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3920536 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 34.0 | 2.67e-01 | 70.3% | 27.5% |
| 3226497 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.56 | 38.0 | 3.28e-01 | 70.3% | 56.5% |
| 4567929 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.50 | 37.0 | 2.43e-01 | 81.1% | 43.5% |
D2
medium
residues 240-333_638-650
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gu1A03 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.52 | 37.0 | 3.45e-01 | 73.8% | 89.4% |
| 2nujA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 40.0 | 3.67e-01 | 85.0% | 83.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3289567 | 881.1.1.15 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3558 | 0.61 | 38.0 | 3.51e-01 | 77.6% | 48.9% |
| 3673068 | 331.3.1.3 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START | 0.57 | 46.0 | 3.65e-01 | 86.9% | 78.6% |
| 3627777 | 71.1.1.19 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 | 0.56 | 44.0 | 3.41e-01 | 84.1% | 82.5% |
| 5040360 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 41.0 | 4.28e-01 | 77.6% | 96.8% |
| 3342595 | 9.23.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin | 0.51 | 40.0 | 3.46e-01 | 86.0% | 76.3% |
| 3319618 | 331.3.1.40 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1997 | 0.50 | 42.0 | 3.48e-01 | 90.7% | 74.2% |
| 5072111 | 325.1.6.9 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PF26482 | 0.50 | 38.0 | 3.43e-01 | 82.2% | 100.0% |
D3
medium
residues 334-524
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k7lA01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.73 | 61.0 | 6.08e-01 | 93.2% | 83.8% |
| 1yp1A00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.72 | 62.0 | 6.11e-01 | 95.3% | 86.4% |
| 3g5cA01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.70 | 62.0 | 6.02e-01 | 95.3% | 85.0% |
| 1bkcE00 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.70 | 63.0 | 5.69e-01 | 95.8% | 89.1% |
| 8esvA01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.69 | 61.0 | 5.70e-01 | 93.2% | 91.6% |
| 6qigA01 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.66 | 59.0 | 5.84e-01 | 93.2% | 91.9% |
| 4on1A02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.65 | 53.0 | 5.35e-01 | 95.3% | 84.1% |
| 3g85A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 41.0 | 4.67e-01 | 84.8% | 90.2% |
| 3v38A00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.61 | 50.0 | 4.21e-01 | 87.4% | 81.7% |
| 1a2zA00 | 3.40.630.20 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Peptidase C15, pyroglutamyl peptidase I-like | 0.58 | 48.0 | 4.63e-01 | 86.9% | 99.1% |
| 3ojcA01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 36.0 | 4.41e-01 | 85.3% | 100.0% |
| 3pqvA02 | 3.30.360.20 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › RNA 3'-terminal phosphate cyclase, insert domain | 0.58 | 31.0 | 4.14e-01 | 81.2% | 100.0% |
| 4yleA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 40.0 | 4.64e-01 | 85.9% | 100.0% |
| 1q3kA00 | 3.40.50.10310 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Creatininase | 0.56 | 45.0 | 4.03e-01 | 82.7% | 92.7% |
| 1augA00 | 3.40.630.20 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Peptidase C15, pyroglutamyl peptidase I-like | 0.56 | 46.0 | 4.51e-01 | 87.4% | 99.5% |
| 1jdpB02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 49.0 | 4.75e-01 | 94.2% | 94.8% |
| 4ms4A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 48.0 | 4.62e-01 | 93.2% | 94.9% |
| 2i9iA00 | 3.30.160.180 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Putative neuraminyllactose-binding hemagglutinin homolog like domain | 0.55 | 45.0 | 4.28e-01 | 85.3% | 85.5% |
| 4eziA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 44.0 | 3.86e-01 | 83.2% | 76.2% |
| 4mptA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 47.0 | 4.50e-01 | 92.7% | 93.4% |
| 1dp4A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 47.0 | 4.55e-01 | 92.7% | 96.3% |
| 3eafA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 47.0 | 4.66e-01 | 93.7% | 94.2% |
| 4ga4A02 | 3.40.1030.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.53 | 46.0 | 4.17e-01 | 92.1% | 84.7% |
| 3i45A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 46.0 | 4.61e-01 | 93.2% | 93.4% |
| 3h5lA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 46.0 | 4.34e-01 | 93.2% | 98.7% |
| 5kc8A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 46.0 | 4.32e-01 | 93.2% | 94.9% |
| 5yznA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 41.0 | 3.72e-01 | 80.1% | 91.3% |
| 4ms4B01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 46.0 | 4.35e-01 | 93.2% | 94.3% |
| 2q0xA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 42.0 | 3.68e-01 | 83.2% | 92.7% |
| 1usgA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 46.0 | 4.52e-01 | 92.1% | 93.5% |
| 1q1gA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.52 | 42.0 | 3.84e-01 | 82.7% | 94.2% |
| 3hutA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 45.0 | 4.55e-01 | 92.7% | 93.9% |
| 1brwA02 | 3.40.1030.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain | 0.52 | 45.0 | 4.01e-01 | 92.1% | 82.7% |
| 3tsnA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.52 | 42.0 | 3.35e-01 | 83.2% | 99.7% |
| 3lopA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 45.0 | 4.37e-01 | 92.1% | 91.9% |
| 1ptmA00 | 3.40.718.10 | Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase | 0.52 | 42.0 | 3.50e-01 | 84.3% | 99.7% |
| 4gnrA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 45.0 | 4.47e-01 | 92.7% | 94.0% |
| 4rv5A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 45.0 | 4.40e-01 | 92.7% | 94.7% |
| 3h6gA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 45.0 | 4.44e-01 | 93.7% | 94.3% |
| 4xfkA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 45.0 | 4.35e-01 | 93.7% | 94.9% |
| 4kv7A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 45.0 | 4.39e-01 | 94.2% | 91.0% |
| 2gj8D00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 42.0 | 4.39e-01 | 85.9% | 96.5% |
| 1b0zA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 39.0 | 3.69e-01 | 85.3% | 66.5% |
| 2ajtA01 | 3.40.50.10940 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 41.0 | 4.26e-01 | 85.9% | 94.9% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3571521 | 2498.1.1.4 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Reprolysin | 0.73 | 62.0 | 5.89e-01 | 95.3% | 75.6% |
| 3867909 | 2498.1.1.4 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Reprolysin | 0.73 | 62.0 | 5.79e-01 | 94.8% | 73.9% |
| 5058596 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.73 | 65.0 | 5.71e-01 | 94.2% | 80.4% |
| 4082915 | 2498.1.1.4 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Reprolysin | 0.72 | 63.0 | 5.72e-01 | 95.3% | 71.4% |
| None | — | 0.69 | 62.0 | 5.69e-01 | 94.8% | 79.2% | |
| 3746264 | 2498.1.1.4 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Reprolysin | 0.69 | 63.0 | 5.58e-01 | 95.8% | 74.7% |
| None | — | 0.69 | 62.0 | 5.72e-01 | 94.8% | 78.8% | |
| 3572114 | 2498.1.1.4 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Reprolysin | 0.69 | 62.0 | 5.49e-01 | 95.8% | 73.0% |
| 5071884 | 2498.1.1.25 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M6 | 0.67 | 58.0 | 5.62e-01 | 91.1% | 89.3% |
| 4969915 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.67 | 61.0 | 5.48e-01 | 95.8% | 89.0% |
| 5037422 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.67 | 59.0 | 5.76e-01 | 93.2% | 86.7% |
| 3176879 | 2498.1.1.69 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › PIG-S | 0.66 | 55.0 | 5.64e-01 | 86.9% | 98.3% |
| 3794159 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.64 | 48.0 | 5.23e-01 | 92.7% | 91.3% |
| 4001410 | 2498.1.1.74 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Metallopep | 0.64 | 57.0 | 4.95e-01 | 93.7% | 92.6% |
| 224054 | 3598.1.1.0 ↗ | a/b three-layered sandwiches › Cellulose Synthase Subunit B a/b domain › Cellulose Synthase Subunit B a/b domain › Cellulose Synthase Subunit B a/b domain | 0.62 | 36.0 | 4.36e-01 | 90.1% | 88.3% |
| 3200271 | 2007.2.2.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PIG-S | 0.60 | 46.0 | 4.94e-01 | 89.5% | 91.5% |
| 3225478 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.58 | 51.0 | 4.74e-01 | 93.7% | 91.7% |
| 3475300 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.58 | 52.0 | 4.83e-01 | 94.2% | 94.5% |
| 4962543 | 2485.2.1.1 ↗ | a+b three layers › Thioredoxin-like › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RNA 3'-terminal phosphate cyclase, RPTC, insert domain › RTC_insert | 0.58 | 34.0 | 4.35e-01 | 86.9% | 100.0% |
| 3403869 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.57 | 50.0 | 4.61e-01 | 93.2% | 96.2% |
| 3389835 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.56 | 49.0 | 4.71e-01 | 93.2% | 95.5% |
| 3602497 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.56 | 49.0 | 4.67e-01 | 93.7% | 91.1% |
| 3933563 | 7579.1.1.71 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DDHD | 0.56 | 45.0 | 3.93e-01 | 84.8% | 100.0% |
| 3061339 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.56 | 50.0 | 3.89e-01 | 94.8% | 85.3% |
| 3229087 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.56 | 49.0 | 4.33e-01 | 93.7% | 91.5% |
| 3290935 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 39.0 | 4.17e-01 | 72.3% | 88.2% |
| 3938695 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.55 | 49.0 | 4.62e-01 | 93.7% | 93.3% |
| 3505474 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.55 | 48.0 | 4.63e-01 | 93.7% | 95.9% |
| 3388524 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.55 | 48.0 | 4.43e-01 | 93.7% | 86.8% |
| 4957014 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.55 | 49.0 | 4.80e-01 | 94.8% | 93.2% |
| 3913712 | 7579.1.1.71 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DDHD | 0.55 | 45.0 | 3.97e-01 | 84.3% | 99.3% |
| 3218098 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.55 | 43.0 | 4.35e-01 | 81.7% | 97.4% |
| 4006806 | 2008.1.1.51 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › McrBC | 0.55 | 41.0 | 4.28e-01 | 75.9% | 89.6% |
| 3623798 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.55 | 48.0 | 4.49e-01 | 93.2% | 94.8% |
| 4962755 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.55 | 47.0 | 4.43e-01 | 92.7% | 81.3% |
| 4955658 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.55 | 47.0 | 4.52e-01 | 93.7% | 92.9% |
| 3895399 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.55 | 44.0 | 4.36e-01 | 85.3% | 97.1% |
| 3744536 | 7590.1.1.7 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › MID_MedPIWI | 0.54 | 46.0 | 4.39e-01 | 90.6% | 83.1% |
| 3754349 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.54 | 46.0 | 4.52e-01 | 91.1% | 100.0% |
| 3915318 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.54 | 46.0 | 3.68e-01 | 91.6% | 85.7% |
| 3240683 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.54 | 47.0 | 4.32e-01 | 93.7% | 94.8% |
| 3754643 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.54 | 48.0 | 4.57e-01 | 94.8% | 95.9% |
| 5007457 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.54 | 47.0 | 4.49e-01 | 93.7% | 95.1% |
| 3797400 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.54 | 48.0 | 4.53e-01 | 94.8% | 95.1% |
| 3410704 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.54 | 48.0 | 4.53e-01 | 94.8% | 94.7% |
| 4955618 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.54 | 48.0 | 4.68e-01 | 94.8% | 93.2% |
| 3708970 | 2007.1.2.28 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_A-cyclase_1 | 0.54 | 34.0 | 3.70e-01 | 81.2% | 74.4% |
| 4077056 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.54 | 47.0 | 4.27e-01 | 93.7% | 81.6% |
| 3608577 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.53 | 46.0 | 4.11e-01 | 94.2% | 77.9% |
| 3686926 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.53 | 39.0 | 3.34e-01 | 74.3% | 96.1% |
| 4678857 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.53 | 45.0 | 4.37e-01 | 92.7% | 90.9% |
| 1173144 | 2007.1.2.13 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 | 0.52 | 33.0 | 3.97e-01 | 77.5% | 96.0% |
| 3499093 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.52 | 45.0 | 4.47e-01 | 92.1% | 100.0% |
| 3212146 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.51 | 41.0 | 4.20e-01 | 84.8% | 100.0% |
| 2701813 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.51 | 33.0 | 3.95e-01 | 85.9% | 96.9% |
| 3256884 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.51 | 40.0 | 3.78e-01 | 83.2% | 100.0% |
| 3929484 | 2008.6.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains | 0.51 | 39.0 | 3.68e-01 | 80.6% | 95.7% |
| 3703702 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.50 | 35.0 | 3.85e-01 | 93.2% | 86.5% |
| 3637859 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.50 | 40.0 | 3.78e-01 | 81.7% | 83.6% |
D4
medium
residues 525-605
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4z9mB02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.59 | 44.0 | 3.32e-01 | 79.0% | 84.3% |
| 1pwaA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 40.0 | 3.55e-01 | 76.5% | 87.8% |
| 3wa1A01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 38.0 | 3.14e-01 | 72.8% | 68.8% |
| 4aezA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 41.0 | 2.80e-01 | 82.7% | 93.6% |
| 2vseA03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 39.0 | 3.29e-01 | 76.5% | 90.1% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 41.0 | 2.78e-01 | 82.7% | 99.7% |
| 1d8cA02 | 2.170.170.11 | Mainly Beta › Beta Complex › Malate synthase G - maily-beta sub-domain › Malate synthase G - maily-beta sub-domain | 0.53 | 40.0 | 3.56e-01 | 84.0% | 100.0% |
| 6fh1B01 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.53 | 39.0 | 2.92e-01 | 81.5% | 62.7% |
| 4ci8A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 44.0 | 2.98e-01 | 97.5% | 89.0% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3614079 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.60 | 45.0 | 4.24e-01 | 80.2% | 76.8% |
| 3601875 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.60 | 45.0 | 4.15e-01 | 80.2% | 72.4% |
| 3927583 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.59 | 43.0 | 4.21e-01 | 77.8% | 76.7% |
| 3992640 | 331.10.2.7 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › CPSF73-100_C | 0.59 | 43.0 | 4.17e-01 | 77.8% | 74.4% |
| 3838919 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.58 | 39.0 | 3.37e-01 | 70.4% | 93.6% |
| 3934912 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 43.0 | 3.50e-01 | 80.2% | 57.4% |
| 4940816 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.57 | 44.0 | 4.19e-01 | 82.7% | 78.9% |
| 3234509 | 331.2.1.8 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › CPSF73-100_C | 0.57 | 42.0 | 4.02e-01 | 79.0% | 75.8% |
| 3272453 | 6.1.1.7 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › CDtoxinA | 0.56 | 39.0 | 3.30e-01 | 71.6% | 55.6% |
| 3438374 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 37.0 | 2.46e-01 | 70.4% | 44.4% |
| 3232091 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 40.0 | 3.56e-01 | 76.5% | 71.3% |
| 3877833 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.55 | 35.0 | 3.57e-01 | 95.1% | 66.3% |
| 3345277 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.54 | 40.0 | 2.54e-01 | 77.8% | 17.5% |
| 4928853 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.54 | 38.0 | 3.43e-01 | 75.3% | 92.2% |
| 3798336 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.52 | 37.0 | 3.91e-01 | 75.3% | 87.1% |
| 3173706 | 304.102.1.1 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_2 | 0.52 | 39.0 | 2.83e-01 | 82.7% | 42.4% |
| 5008200 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.51 | 36.0 | 3.84e-01 | 74.1% | 95.7% |
| 4947136 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.51 | 36.0 | 3.55e-01 | 75.3% | 72.2% |
| 143784 | 6.1.1.19 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › RicinB_lectin_2 | 0.51 | 35.0 | 2.98e-01 | 70.4% | 76.4% |
| 5051120 | 3740.1.1.4 ↗ | alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C | 0.51 | 41.0 | 2.92e-01 | 90.1% | 81.9% |
| 3591534 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.51 | 36.0 | 3.20e-01 | 75.3% | 87.2% |
| 3453009 | 4357.1.1.6 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE_5 | 0.51 | 35.0 | 3.46e-01 | 71.6% | 71.8% |
| 5020831 | 881.4.1.2 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › DUF4367 | 0.50 | 38.0 | 3.34e-01 | 81.5% | 78.4% |
D5
medium
residues 651-725
Domain cluster:
representative
CATH (51)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4bwgD00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.72 | 61.0 | 5.64e-01 | 94.7% | 99.0% |
| 3q8dA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 59.0 | 5.85e-01 | 100.0% | 96.1% |
| 2exdA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 45.0 | 4.61e-01 | 100.0% | 75.7% |
| 3kf6A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 56.0 | 4.69e-01 | 100.0% | 77.9% |
| 3u4vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 57.0 | 4.96e-01 | 100.0% | 75.9% |
| 7k98B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 54.0 | 4.75e-01 | 97.3% | 95.6% |
| 1xjvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 54.0 | 4.46e-01 | 100.0% | 82.4% |
| 1iy9A02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.62 | 33.0 | 3.82e-01 | 86.7% | 73.1% |
| 4glaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 53.0 | 5.09e-01 | 100.0% | 92.1% |
| 2czoA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.61 | 45.0 | 3.83e-01 | 80.0% | 96.2% |
| 6aqgA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 53.0 | 4.37e-01 | 100.0% | 75.2% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 50.0 | 5.04e-01 | 94.7% | 92.0% |
| 2o07A01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.60 | 34.0 | 3.72e-01 | 86.7% | 67.8% |
| 6jy5B00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.60 | 52.0 | 5.07e-01 | 97.3% | 92.7% |
| 1fguB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 53.0 | 4.51e-01 | 100.0% | 84.7% |
| 2e5wA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.60 | 34.0 | 3.77e-01 | 89.3% | 71.4% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.60 | 34.0 | 3.76e-01 | 86.7% | 71.4% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 43.0 | 4.48e-01 | 84.0% | 88.1% |
| 2pi2D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 52.0 | 4.42e-01 | 100.0% | 80.5% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 37.0 | 4.18e-01 | 80.0% | 100.0% |
| 1jb7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 49.0 | 4.37e-01 | 100.0% | 66.4% |
| 4e4fA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 43.0 | 3.54e-01 | 84.0% | 80.1% |
| 4me3A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 49.0 | 4.54e-01 | 100.0% | 99.0% |
| 3qr8A01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.56 | 47.0 | 4.61e-01 | 100.0% | 86.9% |
| 2gl5A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.56 | 42.0 | 3.57e-01 | 84.0% | 89.5% |
| 1f9cA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 42.0 | 3.61e-01 | 82.7% | 92.6% |
| 3rr1A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 42.0 | 3.53e-01 | 84.0% | 81.0% |
| 2nqlA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 43.0 | 3.39e-01 | 86.7% | 93.5% |
| 1h10A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 38.0 | 3.32e-01 | 72.0% | 59.8% |
| 4dxkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 41.0 | 3.53e-01 | 82.7% | 84.0% |
| 3iayA01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 44.0 | 4.20e-01 | 98.7% | 87.8% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 40.0 | 3.25e-01 | 78.7% | 70.1% |
| 4xfwA00 | 3.10.200.10 | Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase | 0.54 | 46.0 | 3.41e-01 | 100.0% | 80.1% |
| 2wweA01 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.54 | 41.0 | 3.77e-01 | 85.3% | 100.0% |
| 1wueB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 39.0 | 3.17e-01 | 77.3% | 85.9% |
| 3vfcA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 41.0 | 3.36e-01 | 85.3% | 87.9% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.53 | 36.0 | 3.73e-01 | 78.7% | 76.1% |
| 5b4wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 40.0 | 2.62e-01 | 86.7% | 51.2% |
| 3t8qB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 38.0 | 3.34e-01 | 76.0% | 83.5% |
| 3gd6A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 40.0 | 3.34e-01 | 84.0% | 94.4% |
| 2zylA01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.52 | 42.0 | 3.51e-01 | 89.3% | 53.3% |
| 7q04F01 | 2.102.10.10 | Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain | 0.52 | 42.0 | 3.73e-01 | 90.7% | 60.6% |
| 2lttA00 | 2.30.31.70 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.52 | 36.0 | 3.67e-01 | 92.0% | 74.3% |
| 1zylA01 | 3.30.200.70 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.52 | 38.0 | 3.93e-01 | 84.0% | 82.9% |
| 3c96A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 33.0 | 2.65e-01 | 72.0% | 28.6% |
| 3cawA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 39.0 | 3.74e-01 | 82.7% | 73.6% |
| 1bqgA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 39.0 | 3.33e-01 | 85.3% | 89.1% |
| 3ddmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 39.0 | 3.41e-01 | 85.3% | 93.6% |
| 2qdeA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 39.0 | 3.28e-01 | 84.0% | 83.1% |
| 1kopA00 | 3.10.200.10 | Alpha Beta › Roll › Carbonic Anhydrase II › Alpha carbonic anhydrase | 0.51 | 43.0 | 3.11e-01 | 96.0% | 65.5% |
| 2qddA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.50 | 39.0 | 3.38e-01 | 89.3% | 76.2% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946191 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 63.0 | 6.28e-01 | 100.0% | 97.4% |
| 4281449 | 2.4.1.3 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK | 0.69 | 48.0 | 3.98e-01 | 82.7% | 42.2% |
| 4038686 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.67 | 60.0 | 5.81e-01 | 100.0% | 92.9% |
| 4277745 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.67 | 61.0 | 6.02e-01 | 100.0% | 93.8% |
| 4396747 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.67 | 60.0 | 5.88e-01 | 100.0% | 92.5% |
| 3242941 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 56.0 | 5.78e-01 | 98.7% | 98.6% |
| 4200438 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.66 | 59.0 | 5.81e-01 | 100.0% | 92.5% |
| 4998346 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.66 | 47.0 | 3.93e-01 | 85.3% | 43.1% |
| 4288723 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.66 | 57.0 | 5.77e-01 | 100.0% | 96.0% |
| 4193291 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.66 | 59.0 | 5.57e-01 | 100.0% | 82.2% |
| 4272096 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.66 | 59.0 | 5.60e-01 | 100.0% | 92.2% |
| 4999988 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.66 | 49.0 | 5.34e-01 | 94.7% | 100.0% |
| 4245059 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.65 | 58.0 | 5.62e-01 | 100.0% | 89.4% |
| 4646663 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.64 | 46.0 | 3.86e-01 | 82.7% | 43.0% |
| 4072975 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.64 | 57.0 | 5.58e-01 | 100.0% | 92.5% |
| 4983389 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.64 | 45.0 | 4.79e-01 | 82.7% | 86.2% |
| 4404198 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.64 | 56.0 | 5.67e-01 | 100.0% | 97.3% |
| 3593282 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 56.0 | 5.25e-01 | 100.0% | 85.3% |
| 4221404 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.64 | 56.0 | 5.56e-01 | 100.0% | 92.5% |
| 4234366 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.64 | 47.0 | 3.95e-01 | 82.7% | 47.2% |
| 3826195 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.63 | 57.0 | 5.15e-01 | 100.0% | 77.0% |
| 4052370 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 48.0 | 5.04e-01 | 100.0% | 95.4% |
| 4927935 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 55.0 | 5.55e-01 | 98.7% | 100.0% |
| 3424450 | 2.1.1.130 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 | 0.63 | 54.0 | 4.50e-01 | 100.0% | 66.4% |
| 3987614 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.62 | 53.0 | 5.21e-01 | 98.7% | 90.0% |
| 3917891 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 50.0 | 4.95e-01 | 98.7% | 83.7% |
| 4526081 | 2.1.1.73 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgA_N | 0.62 | 51.0 | 5.28e-01 | 98.7% | 97.1% |
| 3239000 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 55.0 | 4.60e-01 | 100.0% | 82.3% |
| 3247575 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 55.0 | 4.71e-01 | 100.0% | 77.5% |
| 5000724 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 54.0 | 5.04e-01 | 100.0% | 100.0% |
| 3943796 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.61 | 44.0 | 4.34e-01 | 84.0% | 71.2% |
| 3588396 | 2.12.1.1 ↗ | beta barrels › OB-fold › BC4932-like › BC4932-like › DUF1093 | 0.61 | 53.0 | 4.84e-01 | 100.0% | 81.0% |
| 4505995 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 48.0 | 5.05e-01 | 97.3% | 100.0% |
| 2330653 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.61 | 53.0 | 4.99e-01 | 100.0% | 90.4% |
| 3720086 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 52.0 | 4.12e-01 | 100.0% | 72.9% |
| 3673266 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 43.0 | 4.21e-01 | 100.0% | 67.1% |
| 3236144 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 53.0 | 4.73e-01 | 100.0% | 79.1% |
| 3948546 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.60 | 45.0 | 4.15e-01 | 84.0% | 61.0% |
| 5078248 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.60 | 43.0 | 4.46e-01 | 82.7% | 82.9% |
| 3620698 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.60 | 51.0 | 4.77e-01 | 97.3% | 76.8% |
| 3883341 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.60 | 52.0 | 4.35e-01 | 100.0% | 80.7% |
| 4236900 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.60 | 44.0 | 3.74e-01 | 89.3% | 46.5% |
| 4213053 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 51.0 | 4.80e-01 | 98.7% | 82.1% |
| 4165211 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.59 | 52.0 | 4.21e-01 | 98.7% | 99.3% |
| 4305633 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.59 | 49.0 | 4.89e-01 | 100.0% | 91.3% |
| 4606688 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.59 | 43.0 | 4.37e-01 | 84.0% | 78.7% |
| 4594302 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.59 | 45.0 | 3.98e-01 | 84.0% | 75.7% |
| 3193320 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 51.0 | 3.98e-01 | 98.7% | 50.0% |
| 4341423 | 2.1.1.279 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF4131 | 0.59 | 51.0 | 4.42e-01 | 98.7% | 79.2% |
| 3963148 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.59 | 50.0 | 4.65e-01 | 98.7% | 81.0% |
| 4273244 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 51.0 | 5.01e-01 | 100.0% | 96.2% |
| 3172086 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.58 | 50.0 | 4.42e-01 | 100.0% | 84.3% |
| 5023276 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 50.0 | 4.81e-01 | 97.3% | 100.0% |
| 3389015 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 49.0 | 4.51e-01 | 97.3% | 76.0% |
| 3655845 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 49.0 | 4.64e-01 | 100.0% | 95.8% |
| 3593304 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 49.0 | 4.26e-01 | 100.0% | 66.4% |
| 419 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.57 | 41.0 | 4.17e-01 | 82.7% | 77.6% |
| 4391061 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.57 | 43.0 | 3.78e-01 | 84.0% | 72.5% |
| 3226147 | 2.1.1.44 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dna2 | 0.56 | 48.0 | 4.66e-01 | 100.0% | 88.2% |
| 4311691 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.56 | 49.0 | 4.09e-01 | 100.0% | 91.9% |
| 3969569 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.56 | 37.0 | 3.99e-01 | 93.3% | 86.7% |
| 3967128 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.56 | 39.0 | 3.99e-01 | 90.7% | 78.6% |
| 4049072 | 2.4.1.6 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal | 0.56 | 42.0 | 3.76e-01 | 82.7% | 78.2% |
| 4443040 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.56 | 42.0 | 3.82e-01 | 82.7% | 77.9% |
| 3542914 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.55 | 44.0 | 3.86e-01 | 90.7% | 95.0% |
| 3738963 | 2.1.1.157 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB2 | 0.55 | 47.0 | 4.47e-01 | 100.0% | 85.3% |
| 3927695 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 42.0 | 2.79e-01 | 82.7% | 46.0% |
| 3967545 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.55 | 46.0 | 3.71e-01 | 98.7% | 83.7% |
| 4451633 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.54 | 47.0 | 3.99e-01 | 100.0% | 99.2% |
| 4103327 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.54 | 47.0 | 4.07e-01 | 100.0% | 99.2% |
| 4346153 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.54 | 46.0 | 3.86e-01 | 98.7% | 100.0% |
| 4417109 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.54 | 41.0 | 3.69e-01 | 82.7% | 83.8% |
| 4237578 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.53 | 46.0 | 4.01e-01 | 100.0% | 100.0% |
| 4380962 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.53 | 40.0 | 3.62e-01 | 82.7% | 83.8% |
| 4984320 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.52 | 39.0 | 3.36e-01 | 82.7% | 69.2% |
| 3985171 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.52 | 43.0 | 3.67e-01 | 97.3% | 97.1% |
| 3276021 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.52 | 41.0 | 2.48e-01 | 86.7% | 31.7% |
| 4309833 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.52 | 39.0 | 3.33e-01 | 82.7% | 72.7% |
| 5080202 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.52 | 45.0 | 3.87e-01 | 100.0% | 96.0% |
| 3973121 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.51 | 38.0 | 3.30e-01 | 82.7% | 72.7% |
| 5081103 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.51 | 44.0 | 3.78e-01 | 100.0% | 95.2% |
| 4880118 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.50 | 37.0 | 3.82e-01 | 82.7% | 87.1% |
| 4236717 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.50 | 43.0 | 3.76e-01 | 100.0% | 100.0% |
| 4927010 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.50 | 41.0 | 3.58e-01 | 96.0% | 86.4% |