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IMGVR_UViG_3300025676_000013-3300025676-Ga0209657_100006515
Arc-VirIMGVR_UViG_3300025676_000013-3300025676-Ga0209657_100006515
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-174
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11649.13 best | T4_neck-protein | 87.1 | 1.80e-24 | 99.4% | 54.0% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3f1sB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 34.0 | 4.55e-01 | 73.3% | 87.1% |
| 2oq5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 34.0 | 4.30e-01 | 72.7% | 78.8% |
| 7pzoA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 32.0 | 4.31e-01 | 72.7% | 83.3% |
| 1a7sA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 32.0 | 4.09e-01 | 72.7% | 77.1% |
| 1ntpA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.66 | 32.0 | 4.12e-01 | 73.3% | 78.6% |
| 1ym0A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 34.0 | 4.21e-01 | 73.8% | 78.6% |
| 3dfjA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 33.0 | 4.08e-01 | 72.7% | 76.1% |
| 1eq9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 33.0 | 4.12e-01 | 73.8% | 80.0% |
| 4h4fA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 34.0 | 4.17e-01 | 73.3% | 80.0% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.64 | 35.0 | 4.10e-01 | 83.7% | 74.2% |
| 1ekbB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.64 | 34.0 | 4.20e-01 | 73.3% | 81.7% |
| 2r0lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 33.0 | 4.04e-01 | 73.8% | 77.0% |
| 5fcrC02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 33.0 | 4.11e-01 | 73.8% | 81.3% |
| 3tk9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 31.0 | 3.95e-01 | 73.3% | 78.5% |
| 3tvjB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 31.0 | 3.94e-01 | 73.3% | 78.5% |
| 1dx5M02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 35.0 | 4.16e-01 | 73.3% | 79.8% |
| 2f91A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 34.0 | 4.15e-01 | 73.8% | 82.3% |
| 1p3cA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 31.0 | 3.89e-01 | 73.8% | 80.0% |
| 3govB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 35.0 | 4.06e-01 | 73.8% | 82.1% |
| 3cp7A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 32.0 | 3.88e-01 | 74.4% | 86.5% |
| 7r7cr01 | 2.40.10.310 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.50 | 22.0 | 3.36e-01 | 75.0% | 100.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4770105 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.62 | 36.0 | 3.88e-01 | 74.4% | 66.4% |
| 4952430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 36.0 | 4.40e-01 | 73.3% | 90.0% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.55 | 40.0 | 4.53e-01 | 85.5% | 98.5% |
| 4953386 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.55 | 38.0 | 4.24e-01 | 83.1% | 87.1% |
| 3628582 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 33.0 | 4.01e-01 | 77.9% | 92.2% |
| 3502370 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.53 | 42.0 | 4.38e-01 | 83.7% | 96.9% |
| 3942828 | 1.1.13.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › KPP10_Orf10 | 0.52 | 38.0 | 4.11e-01 | 75.0% | 93.1% |
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.52 | 38.0 | 4.23e-01 | 86.0% | 98.5% |
| 3171981 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.51 | 28.0 | 3.43e-01 | 79.7% | 80.5% |