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IMGVR_UViG_3300025676_000423-3300025676-Ga0209657_100663110
Arc-VirIMGVR_UViG_3300025676_000423-3300025676-Ga0209657_100663110
Identity
- Kingdom:
- archaea
Quality
88.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 374-515
Domain cluster:
rep: gwf1_scaffold_41_prodigal-single.1__X__X__00459__D378-518
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13476.13 best | AAA_23 | 45.4 | 2.20e-11 | 95.1% | 53.7% |
D2
medium
residues 1-13_124-214
Domain cluster:
rep: SR-VP_4-6_scaffold_141_4176636_prodigal-single.1__X__X__00203__D123-234
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ltyA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.75 | 66.0 | 4.76e-01 | 94.2% | 70.5% |
| 3thoB01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.75 | 68.0 | 4.96e-01 | 95.2% | 45.5% |
| 3iveA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.71 | 60.0 | 4.22e-01 | 89.4% | 65.2% |
| 2nxfA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.70 | 63.0 | 4.45e-01 | 97.1% | 52.9% |
| 6ebqA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.61 | 45.0 | 4.15e-01 | 77.9% | 84.1% |
| 1eepA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 53.0 | 3.79e-01 | 96.2% | 51.0% |
| 6d2xA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 51.0 | 3.69e-01 | 97.1% | 66.6% |
| 1hjxA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.60 | 51.0 | 3.81e-01 | 98.1% | 66.3% |
| 6uqjA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.59 | 51.0 | 3.62e-01 | 97.1% | 73.0% |
| 6m37B01 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.59 | 46.0 | 4.73e-01 | 83.7% | 99.0% |
| 1s3lA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.58 | 43.0 | 3.75e-01 | 78.8% | 49.7% |
| 5yloA00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.58 | 47.0 | 3.62e-01 | 87.5% | 79.6% |
| 4kruA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.57 | 48.0 | 3.90e-01 | 96.2% | 71.5% |
| 4rcaB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.56 | 46.0 | 3.50e-01 | 99.0% | 38.2% |
| 2h29A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 45.0 | 3.71e-01 | 88.5% | 79.3% |
| 3r6hA00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 48.0 | 3.78e-01 | 97.1% | 76.4% |
| 3ot6A00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.55 | 48.0 | 3.75e-01 | 98.1% | 76.1% |
| 7yjmB01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 44.0 | 3.45e-01 | 91.3% | 66.8% |
| 2fbmA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.54 | 48.0 | 3.88e-01 | 99.0% | 90.1% |
| 5wydA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.54 | 48.0 | 3.89e-01 | 100.0% | 64.7% |
| 3fmgA01 | 3.40.50.11130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoprotein VP7, domain 1 | 0.54 | 47.0 | 4.19e-01 | 97.1% | 80.4% |
| 5lqdD01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.53 | 46.0 | 3.60e-01 | 97.1% | 89.6% |
| 5c9gF01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.53 | 47.0 | 3.82e-01 | 99.0% | 88.3% |
| 3qxzA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.53 | 46.0 | 3.79e-01 | 99.0% | 88.9% |
| 3g64A01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.52 | 46.0 | 3.71e-01 | 100.0% | 88.8% |
| 1wwlB00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.51 | 45.0 | 3.25e-01 | 100.0% | 45.2% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3967796 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.79 | 70.0 | 4.96e-01 | 94.2% | 71.2% |
| 5001107 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.76 | 67.0 | 4.91e-01 | 94.2% | 78.5% |
| 4931077 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.75 | 65.0 | 5.26e-01 | 92.3% | 75.8% |
| 3976919 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.75 | 66.0 | 4.76e-01 | 94.2% | 70.7% |
| 3958752 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.75 | 66.0 | 5.37e-01 | 94.2% | 72.4% |
| 5080233 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.75 | 64.0 | 4.52e-01 | 92.3% | 47.7% |
| 5073254 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.75 | 65.0 | 5.20e-01 | 94.2% | 75.5% |
| 4947548 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.74 | 64.0 | 4.73e-01 | 93.3% | 56.5% |
| 1563534 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.73 | 67.0 | 4.89e-01 | 96.2% | 44.5% |
| 4175959 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.73 | 65.0 | 4.83e-01 | 97.1% | 82.7% |
| 5052858 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.68 | 62.0 | 4.50e-01 | 100.0% | 36.8% |
| 3219936 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.67 | 59.0 | 4.15e-01 | 99.0% | 53.4% |
| 4944650 | 246.2.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases | 0.66 | 58.0 | 4.31e-01 | 94.2% | 70.8% |
| 4953543 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.64 | 56.0 | 4.22e-01 | 94.2% | 65.8% |
| 4456929 | 2495.1.1.0 ↗ | a/b three-layered sandwiches › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain › Cell-division inhibitor MinC, N-terminal domain | 0.63 | 50.0 | 5.23e-01 | 84.6% | 100.0% |
| 4998388 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.61 | 52.0 | 4.32e-01 | 94.2% | 93.5% |
| 3485397 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.58 | 48.0 | 3.45e-01 | 92.3% | 78.8% |
| 4648479 | 7577.1.1.1 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_1_2 | 0.56 | 47.0 | 3.44e-01 | 92.3% | 50.8% |
| 3857320 | 2486.1.1.1 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › ECH_1 | 0.53 | 48.0 | 3.52e-01 | 100.0% | 48.2% |
| 5007224 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.53 | 44.0 | 3.33e-01 | 94.2% | 57.5% |
| 3442282 | 207.1.1.143 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14, LRR_R13L1-DRL21 | 0.52 | 45.0 | 3.19e-01 | 100.0% | 38.1% |
| 3460623 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.51 | 46.0 | 3.89e-01 | 100.0% | 96.0% |
| 3909803 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.51 | 44.0 | 3.79e-01 | 95.2% | 77.0% |
| 3621837 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.50 | 44.0 | 3.10e-01 | 99.0% | 33.1% |
D3
medium
residues 14-123_215-247
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_575784_prodigal-single.1__X__X__00196__D1-108_259-273
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00149.34 best | Metallophos | 35.7 | 1.70e-08 | 97.2% | 47.4% |
D4
medium
residues 248-308_322-361
Domain cluster:
rep: gwf1_scaffold_41_prodigal-single.1__X__X__00459__D256-316