←Back to structures
IMGVR_UViG_3300025686_000823-3300025686-Ga0209506_10139035
Arc-VirIMGVR_UViG_3300025686_000823-3300025686-Ga0209506_10139035
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-170
Domain cluster:
rep: IMGVR_UViG_3300025631_000951-3300025631-Ga0209204_100330714__D33-206
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.72 | 28.0 | 4.17e-01 | 87.0% | 81.7% |
| 1h54B01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.61 | 56.0 | 4.47e-01 | 100.0% | 93.3% |
| 3o0lA00 | 2.60.40.3230 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 39.0 | 4.32e-01 | 92.8% | 83.5% |
| 4bboA00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.58 | 34.0 | 3.70e-01 | 100.0% | 69.0% |
| 4c4vB02 | 2.40.160.50 | Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family | 0.57 | 54.0 | 3.86e-01 | 100.0% | 47.6% |
| 4epaA00 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.57 | 49.0 | 3.15e-01 | 92.0% | 89.7% |
| 4r7kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 39.0 | 3.70e-01 | 83.3% | 58.9% |
| 2wmfA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.56 | 46.0 | 4.79e-01 | 88.4% | 100.0% |
| 1xkwA02 | 2.40.170.20 | Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain | 0.56 | 47.0 | 3.09e-01 | 100.0% | 23.3% |
| 1bh3A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.54 | 46.0 | 3.58e-01 | 89.9% | 59.2% |
| 2porA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.53 | 46.0 | 3.54e-01 | 91.3% | 63.5% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.53 | 35.0 | 3.71e-01 | 71.7% | 74.6% |
| 6eheA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.53 | 43.0 | 3.41e-01 | 88.4% | 71.9% |
| 4d6gA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.52 | 43.0 | 4.48e-01 | 99.3% | 96.9% |
| 4fqeA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.51 | 37.0 | 3.46e-01 | 94.2% | 61.2% |
| 4frxA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.50 | 46.0 | 3.32e-01 | 100.0% | 48.7% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4003952 | 3523.1.1.0 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) | 0.70 | 55.0 | 5.01e-01 | 98.6% | 62.8% |
| 3512269 | 79.1.1.16 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › DUF1983 | 0.66 | 38.0 | 4.64e-01 | 97.1% | 87.8% |
| 3602062 | 210.2.1.0 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain | 0.63 | 40.0 | 3.92e-01 | 87.7% | 58.0% |
| 3252530 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.61 | 43.0 | 3.27e-01 | 100.0% | 32.5% |
| 3989339 | 12.3.1.14 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III | 0.54 | 49.0 | 3.95e-01 | 100.0% | 80.0% |
| 958405 | 9.2.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › Avidin | 0.54 | 30.0 | 3.52e-01 | 84.8% | 77.1% |
| 4976957 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.54 | 45.0 | 4.07e-01 | 90.6% | 97.4% |
| 5007185 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.54 | 36.0 | 3.61e-01 | 100.0% | 64.8% |
| 4875201 | 3338.1.1.1 ↗ | a+b two layers › Fragilysin-3 prodomain-like › Fragilysin-3 prodomain › Fragilysin-3 prodomain › fragilysinNterm | 0.54 | 33.0 | 3.35e-01 | 100.0% | 61.6% |
| 4075543 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.53 | 42.0 | 3.28e-01 | 83.3% | 58.9% |
| 888 | 5084.5.1.11 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 | 0.53 | 46.0 | 3.54e-01 | 91.3% | 63.5% |
| 3417002 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 36.0 | 3.86e-01 | 100.0% | 80.8% |
| 4136508 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.51 | 40.0 | 3.04e-01 | 82.6% | 73.9% |
| 4880357 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.51 | 40.0 | 4.14e-01 | 93.5% | 88.1% |