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IMGVR_UViG_3300025686_000823-3300025686-Ga0209506_10139038
Arc-VirIMGVR_UViG_3300025686_000823-3300025686-Ga0209506_10139038
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-96
Domain cluster:
rep: IMGVR_UViG_3300022664_000175-3300022664-Ga0247854_101137212__D3-79
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l7wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 60.0 | 5.79e-01 | 91.4% | 93.3% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 61.0 | 6.02e-01 | 92.5% | 96.9% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 61.0 | 5.02e-01 | 100.0% | 54.2% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 58.0 | 5.60e-01 | 92.5% | 93.2% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 57.0 | 5.30e-01 | 95.7% | 86.7% |
| 4hqeA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 59.0 | 5.69e-01 | 98.9% | 92.4% |
| 1ulyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 51.0 | 5.20e-01 | 89.2% | 87.6% |
| 3u1dB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 53.0 | 4.57e-01 | 88.2% | 64.3% |
| 1yyvB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 57.0 | 5.39e-01 | 100.0% | 85.7% |
| 5f7qC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 43.0 | 4.77e-01 | 72.0% | 98.6% |
| 1t6sB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 44.0 | 4.70e-01 | 78.5% | 96.1% |
| 3blnA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 39.0 | 3.46e-01 | 75.3% | 45.8% |
| 1kzfA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 46.0 | 3.64e-01 | 88.2% | 48.5% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 48.0 | 4.52e-01 | 94.6% | 84.3% |
| 4oi3A00 | 3.30.70.3090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ORF SCO4226, nickel-binding ferredoxin-like monomer | 0.57 | 33.0 | 3.54e-01 | 71.0% | 65.4% |
| 3dp7A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 39.0 | 3.26e-01 | 71.0% | 54.9% |
| 4kvxA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 39.0 | 3.36e-01 | 73.1% | 46.7% |
| 1cjwA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 37.0 | 3.08e-01 | 72.0% | 38.6% |
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 41.0 | 4.12e-01 | 87.1% | 82.8% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 46.0 | 3.74e-01 | 97.8% | 65.4% |
| 5deqB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 4.14e-01 | 80.6% | 96.4% |
| 2nwuB01 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.52 | 36.0 | 3.36e-01 | 73.1% | 97.6% |
| 2c12A02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.51 | 38.0 | 3.42e-01 | 79.6% | 98.5% |
| 3f5bA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 40.0 | 3.32e-01 | 83.9% | 96.5% |
| 1x8dA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 35.0 | 3.46e-01 | 71.0% | 74.2% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5076562 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.72 | 56.0 | 5.56e-01 | 84.9% | 100.0% |
| 4978533 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.72 | 62.0 | 5.46e-01 | 93.5% | 75.6% |
| 3285723 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.71 | 62.0 | 4.97e-01 | 93.5% | 54.9% |
| 4011031 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.71 | 58.0 | 5.06e-01 | 88.2% | 65.0% |
| 3280466 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.71 | 63.0 | 4.93e-01 | 96.8% | 84.7% |
| 5036586 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 57.0 | 5.98e-01 | 87.1% | 100.0% |
| 4404596 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 62.0 | 5.54e-01 | 97.8% | 84.6% |
| 4966215 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 62.0 | 5.14e-01 | 100.0% | 98.8% |
| 3278037 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.69 | 61.0 | 4.73e-01 | 96.8% | 50.8% |
| 3286725 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.68 | 60.0 | 4.79e-01 | 96.8% | 86.5% |
| 3281879 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.68 | 60.0 | 4.84e-01 | 96.8% | 89.4% |
| 4938741 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.68 | 60.0 | 5.27e-01 | 97.8% | 69.3% |
| 5075771 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.68 | 58.0 | 5.50e-01 | 91.4% | 87.3% |
| 3286277 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.68 | 61.0 | 4.85e-01 | 97.8% | 89.4% |
| 3285760 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.68 | 58.0 | 4.69e-01 | 94.6% | 92.2% |
| 4976773 | 101.1.2.275 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF1495 | 0.67 | 52.0 | 4.97e-01 | 82.8% | 73.6% |
| 5050129 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.67 | 57.0 | 5.46e-01 | 94.6% | 96.4% |
| 5003874 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.67 | 57.0 | 5.30e-01 | 94.6% | 90.0% |
| 4998602 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 56.0 | 4.33e-01 | 91.4% | 58.0% |
| 2609 | 101.1.2.38 ↗ | alpha arrays › HTH › HTH › winged helix domain › RTP | 0.66 | 57.0 | 5.30e-01 | 95.7% | 86.7% |
| 4948099 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 55.0 | 5.23e-01 | 93.5% | 94.5% |
| 4994432 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 55.0 | 5.35e-01 | 94.6% | 82.9% |
| 5048466 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 51.0 | 4.42e-01 | 84.9% | 61.4% |
| 3744355 | 101.1.2.148 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC5_C | 0.64 | 55.0 | 5.00e-01 | 94.6% | 93.6% |
| 5065308 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.64 | 56.0 | 5.17e-01 | 97.8% | 90.0% |
| 5061514 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 57.0 | 4.51e-01 | 98.9% | 75.3% |
| 3941591 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 49.0 | 5.10e-01 | 83.9% | 100.0% |
| 4990676 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.63 | 54.0 | 5.18e-01 | 96.8% | 96.4% |
| 4999601 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 53.0 | 5.15e-01 | 95.7% | 100.0% |
| 4934296 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 44.0 | 4.31e-01 | 76.3% | 76.2% |
| 5030289 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 45.0 | 4.80e-01 | 77.4% | 95.0% |
| 3443063 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.61 | 52.0 | 4.24e-01 | 94.6% | 65.0% |
| 4969221 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.61 | 54.0 | 3.80e-01 | 100.0% | 34.5% |
| 4977541 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 48.0 | 3.81e-01 | 88.2% | 81.5% |
| 4998735 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 50.0 | 4.46e-01 | 93.5% | 80.0% |
| 3519677 | 101.1.2.4 ↗ | alpha arrays › HTH › HTH › winged helix domain › Forkhead | 0.59 | 50.0 | 4.36e-01 | 93.5% | 80.0% |
| 5018390 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 46.0 | 4.26e-01 | 84.9% | 69.7% |
| 5080684 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.58 | 44.0 | 3.79e-01 | 81.7% | 53.5% |
| 3633871 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 51.0 | 3.94e-01 | 97.8% | 80.9% |
| 4965874 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.58 | 45.0 | 4.00e-01 | 84.9% | 58.2% |
| 5016748 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.58 | 45.0 | 4.19e-01 | 84.9% | 67.5% |
| 164542 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.57 | 48.0 | 4.52e-01 | 94.6% | 84.3% |
| 3237013 | 101.1.2.4 ↗ | alpha arrays › HTH › HTH › winged helix domain › Forkhead | 0.57 | 45.0 | 4.09e-01 | 87.1% | 70.8% |
| 4938000 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.57 | 45.0 | 4.56e-01 | 90.3% | 88.4% |
| 3788727 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.56 | 47.0 | 4.15e-01 | 93.5% | 77.1% |
| 4978826 | 873.1.1.18 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HTH_24 | 0.56 | 43.0 | 3.39e-01 | 86.0% | 78.5% |
| 4014683 | 101.1.2.24 ↗ | alpha arrays › HTH › HTH › winged helix domain › MAGE | 0.55 | 46.0 | 4.22e-01 | 95.7% | 84.6% |
| 4974971 | 304.12.1.17 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › GYD | 0.55 | 34.0 | 3.46e-01 | 72.0% | 61.1% |
| 5057183 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.54 | 43.0 | 4.37e-01 | 90.3% | 92.6% |
| 4029392 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.54 | 45.0 | 3.58e-01 | 89.2% | 88.6% |
| 3413832 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.52 | 31.0 | 3.39e-01 | 76.3% | 72.0% |
| 3572643 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.52 | 32.0 | 3.25e-01 | 98.9% | 62.2% |
| 4004118 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.52 | 42.0 | 3.43e-01 | 89.2% | 91.4% |
| 4972750 | 304.12.1.17 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › GYD | 0.50 | 32.0 | 3.18e-01 | 72.0% | 61.1% |
| 3727504 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.50 | 31.0 | 3.06e-01 | 76.3% | 57.0% |