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IMGVR_UViG_3300025689_000855-3300025689-Ga0209407_10114646
Arc-VirIMGVR_UViG_3300025689_000855-3300025689-Ga0209407_10114646
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-79
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cukA03 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.66 | 46.0 | 4.67e-01 | 76.0% | 77.1% |
| 4aw8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.64 | 45.0 | 3.10e-01 | 76.0% | 79.0% |
| 3fm9A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 47.0 | 4.12e-01 | 86.0% | 85.9% |
| 3rc3A02 | 1.20.272.40 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.60 | 51.0 | 4.34e-01 | 100.0% | 74.7% |
| 4ixjA01 | 3.30.1300.80 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.60 | 50.0 | 4.40e-01 | 98.0% | 76.6% |
| 1k78I00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 48.0 | 4.60e-01 | 94.0% | 86.2% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3202736 | 103.1.1.0 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain | 0.78 | 54.0 | 5.49e-01 | 74.0% | 74.0% |
| 5022566 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 49.0 | 4.82e-01 | 96.0% | 78.2% |
| 3961015 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.61 | 43.0 | 3.73e-01 | 78.0% | 90.6% |
| 3723194 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 47.0 | 4.02e-01 | 88.0% | 92.5% |
| 3617172 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.57 | 40.0 | 3.82e-01 | 76.0% | 93.3% |
| 4957413 | 101.1.2.244 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_21 | 0.56 | 45.0 | 4.56e-01 | 98.0% | 92.0% |
| 3992312 | 109.4.1.1181 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Epg5_2 | 0.54 | 43.0 | 3.08e-01 | 100.0% | 28.2% |
| 3698045 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 42.0 | 2.60e-01 | 96.0% | 61.8% |
| 3464617 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.85e-01 | 96.0% | 76.7% |