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IMGVR_UViG_3300025702_000197-3300025702-Ga0209203_10051771
Arc-VirIMGVR_UViG_3300025702_000197-3300025702-Ga0209203_10051771
Identity
- Kingdom:
- archaea
Quality
86.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-48
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ejjX03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 58.0 | 4.66e-01 | 100.0% | 50.5% |
| 4ofyD03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.72 | 58.0 | 4.62e-01 | 100.0% | 47.9% |
| 4j27A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.69 | 52.0 | 4.18e-01 | 100.0% | 40.4% |
| 3rbsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 58.0 | 4.63e-01 | 100.0% | 50.0% |
| 4ye4H01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 54.0 | 4.06e-01 | 100.0% | 50.8% |
| 3mjgX01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 49.0 | 4.14e-01 | 100.0% | 52.3% |
| 6jwfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.62 | 46.0 | 2.72e-01 | 82.9% | 29.1% |
| 7plsA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 49.0 | 4.00e-01 | 100.0% | 50.5% |
| 5c9iD01 | 1.10.439.10 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 | 0.60 | 42.0 | 2.93e-01 | 75.6% | 72.0% |
| 7kbrC01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.60 | 41.0 | 2.96e-01 | 73.2% | 96.3% |
| 3ewiB00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.57 | 41.0 | 2.94e-01 | 85.4% | 32.3% |
| 4hstA01 | 1.10.439.10 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 | 0.57 | 47.0 | 3.34e-01 | 100.0% | 76.8% |
| 1p65A00 | 6.10.140.90 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 38.0 | 3.50e-01 | 73.2% | 49.1% |
| 3zxjA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.57 | 39.0 | 2.42e-01 | 78.0% | 33.3% |
| 2kgfA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.56 | 38.0 | 2.71e-01 | 70.7% | 84.3% |
| 5xuhA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.56 | 44.0 | 3.37e-01 | 100.0% | 52.8% |
| 1b23P03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 41.0 | 3.43e-01 | 100.0% | 72.3% |
| 6ks6Z01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.53 | 40.0 | 2.61e-01 | 100.0% | 90.7% |
| 4hscX04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.53 | 41.0 | 3.25e-01 | 100.0% | 98.2% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 43.0 | 3.08e-01 | 97.6% | 54.0% |
| 2yvsA01 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.53 | 35.0 | 2.67e-01 | 70.7% | 25.4% |
| 2vldB01 | 2.70.180.20 | Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › | 0.53 | 43.0 | 3.21e-01 | 97.6% | 57.6% |
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.52 | 41.0 | 3.24e-01 | 100.0% | 98.2% |
| 7nitA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 42.0 | 3.22e-01 | 100.0% | 54.8% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 44.0 | 2.61e-01 | 100.0% | 36.0% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 37.0 | 3.09e-01 | 100.0% | 94.2% |
| 2n6eA00 | 3.40.1530.20 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) | 0.50 | 38.0 | 3.03e-01 | 95.1% | 92.7% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4016470 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.81 | 68.0 | 4.97e-01 | 100.0% | 34.8% |
| 3730028 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.81 | 68.0 | 5.38e-01 | 100.0% | 45.6% |
| 3632354 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.79 | 66.0 | 5.22e-01 | 100.0% | 45.6% |
| 3201540 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.78 | 65.0 | 4.23e-01 | 100.0% | 21.6% |
| 4954333 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.76 | 63.0 | 5.10e-01 | 100.0% | 47.1% |
| 3769453 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.76 | 65.0 | 5.09e-01 | 100.0% | 47.8% |
| 3863886 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.75 | 64.0 | 4.93e-01 | 100.0% | 45.3% |
| 5016364 | 11.1.1.288 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_13 | 0.75 | 60.0 | 4.73e-01 | 100.0% | 42.2% |
| 3924960 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.70 | 55.0 | 4.44e-01 | 100.0% | 45.3% |
| 3887378 | 4178.1.1.1 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 | 0.68 | 54.0 | 3.88e-01 | 97.6% | 30.4% |
| 3281166 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.67 | 53.0 | 3.98e-01 | 100.0% | 33.9% |
| 3922225 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.66 | 51.0 | 3.76e-01 | 100.0% | 31.9% |
| 5014637 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.65 | 52.0 | 4.16e-01 | 100.0% | 42.0% |
| 4648393 | 10.32.1.2 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C | 0.64 | 51.0 | 3.64e-01 | 100.0% | 55.3% |
| 1588492 | 4178.1.1.0 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain | 0.63 | 51.0 | 3.72e-01 | 100.0% | 31.9% |
| 4367315 | 11.1.1.248 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › bMG6 | 0.63 | 53.0 | 3.91e-01 | 100.0% | 51.7% |
| 5036531 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 49.0 | 3.95e-01 | 100.0% | 42.0% |
| 3266832 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 47.0 | 4.12e-01 | 100.0% | 51.2% |
| 2883197 | 12.1.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C | 0.62 | 49.0 | 3.89e-01 | 100.0% | 45.6% |
| 5002954 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.61 | 49.0 | 3.38e-01 | 100.0% | 25.9% |
| 5036977 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.61 | 50.0 | 3.38e-01 | 100.0% | 23.9% |
| 3988099 | 11.1.4.11 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › PUD | 0.61 | 48.0 | 3.78e-01 | 100.0% | 40.0% |
| 5046323 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 47.0 | 3.79e-01 | 100.0% | 40.0% |
| 4992085 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.60 | 45.0 | 3.82e-01 | 100.0% | 50.0% |
| 4964729 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 49.0 | 4.07e-01 | 100.0% | 51.2% |
| 3988800 | 11.1.1.204 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4982 | 0.58 | 47.0 | 3.61e-01 | 100.0% | 49.1% |
| 3516960 | 12.1.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Fucosidase_C | 0.57 | 44.0 | 3.53e-01 | 100.0% | 41.8% |
| 3670680 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.57 | 40.0 | 2.41e-01 | 87.8% | 35.7% |
| 1888657 | 11.1.1.204 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF4982 | 0.56 | 43.0 | 3.29e-01 | 100.0% | 54.5% |
| 4012569 | 7579.1.1.89 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase, BD-FAE | 0.55 | 41.0 | 2.36e-01 | 95.1% | 29.8% |
| 3499059 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.55 | 41.0 | 3.31e-01 | 90.2% | 64.0% |
| 5022717 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 43.0 | 3.30e-01 | 100.0% | 71.7% |
| 3249410 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 37.0 | 3.25e-01 | 75.6% | 82.6% |
| 4048663 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.52 | 39.0 | 3.88e-01 | 97.6% | 86.7% |
| 3176450 | 1.1.5.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 | 0.52 | 41.0 | 3.27e-01 | 97.6% | 69.7% |
| 3232931 | 10.4.1.9 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 | 0.51 | 38.0 | 3.03e-01 | 100.0% | 35.2% |
| 4959359 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.15e-01 | 97.6% | 33.3% |
| 3635125 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.51 | 39.0 | 2.72e-01 | 92.7% | 45.1% |
| 3652237 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.51 | 38.0 | 2.81e-01 | 92.7% | 90.7% |
| 4928347 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.51 | 39.0 | 2.73e-01 | 100.0% | 27.0% |
| 4999679 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.50 | 40.0 | 2.64e-01 | 97.6% | 97.3% |