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IMGVR_UViG_3300025707_000343-3300025707-Ga0209667_10051461
Arc-VirIMGVR_UViG_3300025707_000343-3300025707-Ga0209667_10051461
Identity
- Kingdom:
- archaea
Quality
92.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-47
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bhoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.73 | 52.0 | 3.88e-01 | 75.6% | 32.7% |
| 4gf3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.65 | 45.0 | 3.39e-01 | 75.6% | 29.3% |
| 4by6B00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.62 | 45.0 | 3.16e-01 | 82.2% | 28.9% |
| 1n7oA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.62 | 50.0 | 4.18e-01 | 95.6% | 81.2% |
| 2qe8A00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.61 | 50.0 | 3.06e-01 | 100.0% | 75.4% |
| 8djfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 47.0 | 2.92e-01 | 91.1% | 47.1% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 45.0 | 3.28e-01 | 84.4% | 60.2% |
| 2z3zA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.59 | 50.0 | 2.94e-01 | 100.0% | 22.3% |
| 2dg1C00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.59 | 49.0 | 2.96e-01 | 95.6% | 35.9% |
| 5jldA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.59 | 40.0 | 2.63e-01 | 73.3% | 26.9% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.59 | 48.0 | 3.62e-01 | 100.0% | 66.2% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.57 | 46.0 | 2.81e-01 | 95.6% | 39.6% |
| 6iw6A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.54 | 37.0 | 2.91e-01 | 73.3% | 38.0% |
| 3omlA03 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.54 | 45.0 | 2.87e-01 | 100.0% | 86.1% |
| 1ntvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 45.0 | 3.21e-01 | 100.0% | 59.2% |
| 1aocA00 | 2.10.90.10 | Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines | 0.53 | 43.0 | 3.05e-01 | 100.0% | 89.7% |
| 1yw5A01 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.53 | 37.0 | 3.39e-01 | 100.0% | 54.0% |
| 4xpmB00 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.52 | 38.0 | 3.46e-01 | 84.4% | 58.2% |
| 2wtvA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.52 | 35.0 | 2.43e-01 | 71.1% | 46.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4179811 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.75 | 55.0 | 5.75e-01 | 80.0% | 87.5% |
| 3759926 | 5.1.8.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › Kelch_1 | 0.75 | 54.0 | 3.83e-01 | 77.8% | 87.4% |
| 4055542 | 241.1.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT | 0.69 | 48.0 | 3.52e-01 | 75.6% | 29.2% |
| 3170676 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.67 | 57.0 | 3.34e-01 | 100.0% | 94.3% |
| 5049811 | 7577.1.1.2 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Aminotran_3 | 0.65 | 45.0 | 2.70e-01 | 75.6% | 13.9% |
| 3705154 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.64 | 44.0 | 4.57e-01 | 73.3% | 82.5% |
| 3886970 | 5.1.4.130 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › AAA_16 | 0.63 | 48.0 | 2.66e-01 | 86.7% | 11.8% |
| 3724346 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 55.0 | 3.39e-01 | 100.0% | 70.4% |
| 3789788 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.62 | 43.0 | 2.57e-01 | 75.6% | 18.0% |
| 3485139 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.62 | 49.0 | 2.93e-01 | 91.1% | 40.2% |
| 3399411 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.60 | 51.0 | 4.14e-01 | 100.0% | 91.1% |
| 5022332 | 3349.1.1.1 ↗ | a+b two layers › DNA polymerase D large subunit DP2 N-terminal domain › DNA polymerase D large subunit DP2 N-terminal domain › DNA polymerase D large subunit DP2 N-terminal domain › PolC_DP2 | 0.59 | 48.0 | 2.98e-01 | 100.0% | 26.1% |
| 3790093 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.59 | 43.0 | 2.49e-01 | 82.2% | 14.5% |
| 3196550 | 1075.4.1.2 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane_2 | 0.59 | 46.0 | 2.76e-01 | 95.6% | 39.3% |
| 3932457 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.58 | 40.0 | 2.51e-01 | 75.6% | 22.4% |
| 5039125 | 375.1.1.83 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-TFIIB | 0.57 | 44.0 | 3.99e-01 | 88.9% | 81.5% |
| 4033432 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.55 | 41.0 | 3.79e-01 | 82.2% | 65.0% |
| 1885514 | 3972.1.1.1 ↗ | alpha bundles › Amylase-binding protein AbpA › Amylase-binding protein AbpA › Amylase-binding protein AbpA › AbpA-like | 0.55 | 40.0 | 2.84e-01 | 84.4% | 87.3% |
| 5038361 | 4294.1.1.13 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Zn_ribbon_TFIIB | 0.54 | 36.0 | 3.63e-01 | 71.1% | 75.6% |
| 4243492 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.51 | 36.0 | 3.44e-01 | 80.0% | 68.3% |