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IMGVR_UViG_3300025707_000368-3300025707-Ga0209667_100040148

Arc-Vir

IMGVR_UViG_3300025707_000368-3300025707-Ga0209667_100040148

Identity

Kingdom:
archaea

Quality

91.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-60
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2askA00 2.10.90.10 Mainly Beta › Ribbon › Cystine Knot Cytokines, subunit B › Cystine-knot cytokines 0.56 35.0 2.85e-01 90.7% 34.7%
2x65A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 43.0 2.66e-01 100.0% 13.8%
4ku4A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 43.0 3.19e-01 92.6% 93.6%
2apnA01 2.60.300.12 Mainly Beta › Sandwich › Hypothetical Protein Aq_1857; Chain: A; › HesB-like domain 0.56 42.0 3.61e-01 87.0% 94.8%
2e1vA02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.54 42.0 2.85e-01 85.2% 95.7%
6mptA01 3.30.420.590 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.54 44.0 3.27e-01 100.0% 69.8%
8dqoB02 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.53 41.0 2.75e-01 85.2% 89.2%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.52 35.0 2.61e-01 70.4% 65.8%
3o8lA03 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 39.0 2.79e-01 90.7% 92.1%
1d5cA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 39.0 2.99e-01 90.7% 98.8%
1wi5A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 42.0 3.85e-01 96.3% 77.3%
6qu3A02 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 43.0 3.04e-01 100.0% 92.2%
3o8oA03 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 44.0 3.03e-01 100.0% 82.9%
1tyyA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 43.0 2.79e-01 100.0% 28.6%
5c78A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 39.0 2.70e-01 92.6% 82.3%
4bvqA02 3.30.1330.180 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Cyanuric acid hydrolase/Barbiturase, RU B 0.50 35.0 2.71e-01 77.8% 36.1%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None — 0.68 60.0 4.12e-01 100.0% 63.2%
4023611 148.1.3.8 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ClpB_D2-small 0.59 48.0 3.98e-01 100.0% 91.8%
4441625 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.57 40.0 2.61e-01 75.9% 96.8%
3282754 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.56 41.0 2.97e-01 79.6% 49.1%
3268285 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.56 43.0 3.12e-01 92.6% 88.4%
4177699 7502.1.1.6 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HisZ_C 0.53 42.0 4.25e-01 88.9% 100.0%
3250027 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.53 40.0 2.87e-01 92.6% 86.2%
5026883 7502.1.1.0 ↗ a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.52 42.0 3.56e-01 90.7% 58.5%
4946623 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.52 39.0 2.87e-01 90.7% 90.8%
3934516 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.51 39.0 2.82e-01 94.4% 78.6%
3617284 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.51 38.0 2.52e-01 90.7% 49.7%
3261414 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.51 39.0 2.76e-01 92.6% 71.6%
3496006 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.51 36.0 2.92e-01 83.3% 88.8%
5001592 2004.1.1.119 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Gtr1_RagA 0.50 38.0 2.83e-01 92.6% 95.1%
4307705 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.50 43.0 2.72e-01 100.0% 23.6%