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IMGVR_UViG_3300025709_000038-3300025709-Ga0209044_10013591
Arc-VirIMGVR_UViG_3300025709_000038-3300025709-Ga0209044_10013591
Identity
- Kingdom:
- archaea
Quality
87.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-85
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h4nA00 | 2.60.40.3750 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 44.0 | 4.75e-01 | 88.0% | 75.8% |
| 3hbzA02 | 2.60.120.890 | Mainly Beta › Sandwich › Jelly Rolls › BT2081, beta-jelly-roll domain | 0.68 | 59.0 | 4.15e-01 | 100.0% | 46.6% |
| 3gbwA00 | 2.60.120.820 | Mainly Beta › Sandwich › Jelly Rolls › PHR domain | 0.63 | 55.0 | 4.37e-01 | 100.0% | 66.5% |
| 1s55A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 55.0 | 4.34e-01 | 100.0% | 46.8% |
| 1cov100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 56.0 | 3.82e-01 | 100.0% | 37.2% |
| 1loxA02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.63 | 48.0 | 4.31e-01 | 100.0% | 57.7% |
| 3gwjA03 | 2.60.40.1520 | Mainly Beta › Sandwich › Immunoglobulin-like › Hemocyanin, C-terminal domain | 0.63 | 55.0 | 4.06e-01 | 100.0% | 66.7% |
| 3m1hD00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 53.0 | 4.14e-01 | 100.0% | 46.0% |
| 1ca1A02 | 2.60.60.20 | Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain | 0.61 | 53.0 | 4.55e-01 | 100.0% | 60.8% |
| 4bz4A00 | 2.60.120.1220 | Mainly Beta › Sandwich › Jelly Rolls › | 0.61 | 52.0 | 3.93e-01 | 100.0% | 66.8% |
| 3vbhC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 52.0 | 3.73e-01 | 100.0% | 37.2% |
| 1xf1A03 | 2.60.40.1710 | Mainly Beta › Sandwich › Immunoglobulin-like › Subtilisin-like superfamily | 0.60 | 52.0 | 4.44e-01 | 100.0% | 66.4% |
| 3jb4C00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 50.0 | 3.63e-01 | 100.0% | 34.4% |
| 7bi2A02 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.59 | 52.0 | 4.36e-01 | 100.0% | 71.2% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.59 | 51.0 | 3.84e-01 | 100.0% | 44.6% |
| 5ufvA00 | 2.70.50.70 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.58 | 47.0 | 3.44e-01 | 92.0% | 41.0% |
| 7clyA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.58 | 51.0 | 3.94e-01 | 100.0% | 82.4% |
| 2zotC00 | 2.60.40.4060 | Mainly Beta › Sandwich › Immunoglobulin-like › Reeler domain | 0.58 | 51.0 | 4.20e-01 | 100.0% | 63.6% |
| 3w6wB02 | 2.60.310.20 | Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › | 0.58 | 51.0 | 4.22e-01 | 100.0% | 58.1% |
| 1e57B00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 47.0 | 3.71e-01 | 100.0% | 47.0% |
| 4liqE05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 48.0 | 4.42e-01 | 100.0% | 74.0% |
| 1hyoA02 | 3.90.850.10 | Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain | 0.56 | 45.0 | 3.05e-01 | 88.0% | 44.4% |
| 5e55B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 3.84e-01 | 97.3% | 63.4% |
| 4ll1C02 | 2.60.40.640 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 48.0 | 3.98e-01 | 100.0% | 57.1% |
| 1mec100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 44.0 | 3.07e-01 | 93.3% | 47.1% |
| 3obaA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 46.0 | 3.94e-01 | 100.0% | 70.6% |
| 2jwyA01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.53 | 41.0 | 3.48e-01 | 86.7% | 48.1% |
| 5nfiB01 | 2.60.40.2100 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 47.0 | 3.88e-01 | 100.0% | 79.6% |
| 2kltA00 | 2.60.40.2030 | Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain | 0.53 | 45.0 | 3.67e-01 | 100.0% | 69.2% |
| 4m8rA01 | 2.60.40.3920 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 41.0 | 3.77e-01 | 100.0% | 64.1% |
| 2dmgA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 45.0 | 3.76e-01 | 100.0% | 62.0% |
| 1ej8A00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.53 | 45.0 | 3.78e-01 | 100.0% | 63.6% |
| 1eajB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 42.0 | 3.76e-01 | 100.0% | 68.3% |
| 2ic2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.71e-01 | 100.0% | 66.3% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.50 | 43.0 | 3.49e-01 | 100.0% | 86.5% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5057681 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 62.0 | 5.83e-01 | 100.0% | 78.9% |
| 3478158 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.70 | 57.0 | 4.81e-01 | 100.0% | 53.6% |
| 3168473 | 10.32.1.306 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF30096 | 0.70 | 62.0 | 4.62e-01 | 100.0% | 54.2% |
| 5040537 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.69 | 60.0 | 5.24e-01 | 100.0% | 64.5% |
| 4132938 | 10.32.1.31 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PepX_C | 0.69 | 62.0 | 4.56e-01 | 100.0% | 52.1% |
| 4013309 | 10.9.1.3 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › Tyrosinase_C | 0.67 | 60.0 | 4.55e-01 | 100.0% | 63.9% |
| 3387903 | 11.1.1.449 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF2393 | 0.66 | 54.0 | 4.91e-01 | 88.0% | 67.0% |
| 4019182 | 10.9.1.3 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › Tyrosinase_C | 0.66 | 59.0 | 4.51e-01 | 100.0% | 64.1% |
| 5043348 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 58.0 | 4.48e-01 | 100.0% | 65.3% |
| 3909542 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.65 | 58.0 | 4.23e-01 | 100.0% | 41.0% |
| 3404864 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.65 | 57.0 | 4.51e-01 | 100.0% | 61.9% |
| 3890321 | 10.32.1.5 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Ephrin_lbd | 0.65 | 57.0 | 4.65e-01 | 100.0% | 53.1% |
| 3774505 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.64 | 57.0 | 4.03e-01 | 100.0% | 38.7% |
| 5042718 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 43.0 | 4.30e-01 | 89.3% | 69.3% |
| 3180378 | 10.9.1.3 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › Tyrosinase_C | 0.64 | 56.0 | 4.56e-01 | 100.0% | 69.0% |
| 134193 | 10.40.1.1 ↗ | beta sandwiches › jelly-roll › PHR domain › PHR domain › PHR | 0.63 | 55.0 | 4.37e-01 | 100.0% | 66.5% |
| 3653863 | 10.9.1.1 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › PPO1_KFDV | 0.63 | 55.0 | 4.40e-01 | 100.0% | 56.1% |
| 3663249 | 10.9.1.1 ↗ | beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › PPO1_KFDV | 0.63 | 54.0 | 4.40e-01 | 100.0% | 52.9% |
| 3402319 | 10.2.1.5 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › TGFb_propeptide | 0.63 | 56.0 | 4.01e-01 | 100.0% | 37.7% |
| 3174097 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.62 | 55.0 | 4.14e-01 | 100.0% | 64.7% |
| 3592222 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.62 | 55.0 | 4.38e-01 | 100.0% | 56.8% |
| 3627306 | 11.2.1.52 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem | 0.62 | 56.0 | 4.70e-01 | 100.0% | 75.2% |
| 3867993 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.62 | 54.0 | 4.01e-01 | 100.0% | 44.4% |
| 3685116 | 10.32.1.86 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C_2 | 0.62 | 43.0 | 3.30e-01 | 73.3% | 42.2% |
| 4572391 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.60 | 53.0 | 4.15e-01 | 100.0% | 66.3% |
| 3377682 | 10.2.1.70 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › SURNod19 | 0.59 | 51.0 | 3.91e-01 | 100.0% | 66.8% |
| 3713749 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.59 | 50.0 | 3.94e-01 | 100.0% | 82.7% |
| 3482386 | 10.32.1.5 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Ephrin_lbd | 0.59 | 50.0 | 3.96e-01 | 100.0% | 54.1% |
| 3477632 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 51.0 | 4.05e-01 | 100.0% | 56.2% |
| 3747151 | 10.1.1.9 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › SPRY,PRY | 0.58 | 49.0 | 3.76e-01 | 98.7% | 59.5% |
| 3513020 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 51.0 | 4.47e-01 | 100.0% | 67.3% |
| 3435033 | 10.5.1.0 ↗ | beta sandwiches › jelly-roll › Viral protein domain › Viral protein domain | 0.57 | 49.0 | 3.76e-01 | 100.0% | 42.1% |
| 3238843 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 49.0 | 3.82e-01 | 100.0% | 49.1% |
| 3542765 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.57 | 50.0 | 4.39e-01 | 100.0% | 82.6% |
| 3498611 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 48.0 | 3.74e-01 | 100.0% | 61.1% |
| 3460312 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.57 | 49.0 | 3.77e-01 | 100.0% | 44.4% |
| 3506521 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 4.04e-01 | 92.0% | 66.7% |
| 3399283 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 49.0 | 4.34e-01 | 100.0% | 69.1% |
| 4340834 | 3698.1.1.0 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain | 0.55 | 47.0 | 4.19e-01 | 100.0% | 99.1% |
| 4120417 | 11.1.1.611 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Nis1 | 0.55 | 48.0 | 4.16e-01 | 100.0% | 70.8% |
| 3484942 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.55 | 46.0 | 4.16e-01 | 100.0% | 68.6% |
| 3394803 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.54 | 46.0 | 3.59e-01 | 98.7% | 75.4% |
| 3899364 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 4.11e-01 | 97.3% | 66.4% |
| 3519588 | 11.1.1.447 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › NDNF_C | 0.54 | 47.0 | 4.02e-01 | 100.0% | 71.2% |
| 4019428 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 4.26e-01 | 100.0% | 73.0% |
| 3869304 | 11.1.1.9 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_N | 0.53 | 45.0 | 3.70e-01 | 100.0% | 69.0% |
| 3783953 | 11.1.1.626 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Bul1_N | 0.53 | 44.0 | 3.15e-01 | 100.0% | 67.3% |
| 3498835 | 223.1.1.114 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30393 | 0.53 | 36.0 | 2.67e-01 | 73.3% | 86.4% |
| 5033281 | 304.100.1.1 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like › PurS | 0.52 | 39.0 | 4.10e-01 | 88.0% | 92.3% |
| 3519566 | 10.32.1.230 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › NDNF_N | 0.52 | 45.0 | 3.78e-01 | 100.0% | 63.0% |
| 3478904 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 3.61e-01 | 97.3% | 59.3% |
| 5012176 | 3156.1.1.7 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › SoxE | 0.52 | 44.0 | 3.63e-01 | 100.0% | 59.7% |
| 184718 | 1.1.13.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_12 | 0.50 | 43.0 | 3.49e-01 | 100.0% | 86.5% |