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IMGVR_UViG_3300025724_000463-3300025724-Ga0208196_10083519
Arc-VirIMGVR_UViG_3300025724_000463-3300025724-Ga0208196_10083519
Identity
- Kingdom:
- archaea
Quality
93.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-95
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF09967.16 best | DUF2201 | 37.2 | 4.00e-09 | 100.0% | 61.8% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6z6fA01 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.58 | 47.0 | 3.28e-01 | 93.6% | 34.1% |
| 2zosB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.54 | 49.0 | 4.09e-01 | 100.0% | 71.7% |
| 4pwyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 47.0 | 3.51e-01 | 100.0% | 56.8% |
| 3ssmC02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 47.0 | 3.68e-01 | 100.0% | 58.8% |
| 1juvA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.52 | 44.0 | 3.55e-01 | 100.0% | 46.6% |
| 2o6lB00 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 41.0 | 3.43e-01 | 100.0% | 48.8% |
| 7f4oA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 41.0 | 3.29e-01 | 87.2% | 60.7% |
| 2b78A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 43.0 | 3.47e-01 | 96.8% | 77.4% |
| 1nv8A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 44.0 | 3.56e-01 | 100.0% | 75.6% |
| 6r62A00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.51 | 44.0 | 3.32e-01 | 100.0% | 50.0% |
| 2cf5A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 43.0 | 3.72e-01 | 100.0% | 58.6% |
| 3f6tA03 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.51 | 45.0 | 3.45e-01 | 100.0% | 51.8% |
| 3jyoA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 44.0 | 3.92e-01 | 100.0% | 68.5% |
| 4ikcA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.50 | 38.0 | 2.82e-01 | 83.0% | 47.8% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4959354 | 2006.1.6.24 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF2201 | 0.86 | 79.0 | 6.35e-01 | 100.0% | 54.1% |
| 4264308 | 2006.1.6.24 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF2201 | 0.78 | 72.0 | 5.85e-01 | 100.0% | 56.4% |
| 5036171 | 7518.1.1.0 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like | 0.62 | 44.0 | 4.03e-01 | 93.6% | 57.5% |
| 4988478 | 2003.1.5.12 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_N4_Mtase | 0.60 | 44.0 | 3.08e-01 | 77.7% | 52.0% |
| 1718755 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.60 | 47.0 | 4.81e-01 | 86.2% | 97.8% |
| 4332296 | 7570.1.1.6 ↗ | a/b three-layered sandwiches › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › MurD-like peptide ligases, peptide-binding domain › PF27274 | 0.59 | 51.0 | 4.64e-01 | 96.8% | 75.8% |
| 5002086 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.59 | 50.0 | 3.45e-01 | 96.8% | 61.7% |
| 3583274 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.58 | 50.0 | 3.33e-01 | 98.9% | 59.2% |
| 3516271 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.57 | 48.0 | 3.81e-01 | 93.6% | 54.0% |
| 4175476 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.57 | 49.0 | 3.27e-01 | 97.9% | 61.2% |
| 3704715 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 42.0 | 3.41e-01 | 78.7% | 81.1% |
| 3553500 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.54 | 47.0 | 3.39e-01 | 100.0% | 50.7% |
| 3202045 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.54 | 45.0 | 3.95e-01 | 100.0% | 61.4% |
| None | — | 0.53 | 47.0 | 3.32e-01 | 100.0% | 67.1% | |
| None | — | 0.53 | 47.0 | 3.22e-01 | 100.0% | 32.2% | |
| 4522346 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.52 | 46.0 | 3.56e-01 | 100.0% | 65.0% |
| 3668760 | 2003.1.11.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Formate/glycerate dehydrogenase catalytic domain-like › Beta-prop_RSE1_2nd | 0.52 | 38.0 | 3.37e-01 | 76.6% | 72.1% |
| 4981231 | 2003.1.7.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like | 0.52 | 43.0 | 3.27e-01 | 92.6% | 38.7% |
| 3266012 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.52 | 45.0 | 3.51e-01 | 100.0% | 68.0% |
| 3688424 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.52 | 45.0 | 3.24e-01 | 100.0% | 54.4% |
| 3564857 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 44.0 | 3.60e-01 | 94.7% | 71.7% |
| 4578766 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.51 | 42.0 | 3.43e-01 | 95.7% | 80.8% |
| 3469414 | 207.1.1.96 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1 | 0.50 | 43.0 | 3.23e-01 | 96.8% | 45.5% |
| 4028975 | 2003.1.5.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GCD14 | 0.50 | 43.0 | 3.51e-01 | 100.0% | 60.5% |