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IMGVR_UViG_3300025727_000634-3300025727-Ga0209047_10044714
Arc-VirIMGVR_UViG_3300025727_000634-3300025727-Ga0209047_10044714
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-123
Domain cluster:
rep: SRR1747022_scaffold_43_prodigal-single.1__X__X__00237__D9-86
D2
medium
residues 124-198
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ufbA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.75 | 67.0 | 4.29e-01 | 97.3% | 39.1% |
| 2ar0A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.74 | 66.0 | 4.25e-01 | 97.3% | 49.1% |
| 1y7pB01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 39.0 | 3.91e-01 | 70.7% | 65.0% |
| 3hp7A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 47.0 | 3.53e-01 | 98.7% | 40.0% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.55 | 37.0 | 3.52e-01 | 72.0% | 56.2% |
| 2z0zA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 36.0 | 2.77e-01 | 73.3% | 27.8% |
| 3louA02 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.52 | 44.0 | 3.31e-01 | 96.0% | 36.0% |
| 4h5bA00 | 3.30.1460.70 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 40.0 | 3.30e-01 | 86.7% | 74.3% |
| 5wm1A05 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.52 | 44.0 | 3.90e-01 | 98.7% | 81.2% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838236 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.78 | 66.0 | 4.72e-01 | 90.7% | 36.1% |
| 5046632 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.76 | 67.0 | 4.12e-01 | 96.0% | 24.5% |
| 4941122 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.74 | 61.0 | 3.92e-01 | 89.3% | 31.8% |
| 3987620 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.73 | 65.0 | 4.21e-01 | 97.3% | 38.5% |
| 4997329 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.72 | 63.0 | 4.05e-01 | 96.0% | 40.0% |
| 5005190 | 2003.1.5.62 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I | 0.71 | 58.0 | 3.74e-01 | 90.7% | 26.3% |
| 4998596 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.68 | 61.0 | 4.03e-01 | 100.0% | 36.1% |
| 4812692 | 2003.1.5.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › N6_Mtase | 0.66 | 60.0 | 4.20e-01 | 100.0% | 39.2% |
| 3706357 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.60 | 53.0 | 3.78e-01 | 98.7% | 82.7% |
| 3250928 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 40.0 | 3.94e-01 | 70.7% | 65.0% |
| 4992122 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.59 | 39.0 | 3.97e-01 | 70.7% | 69.3% |
| 3974775 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.59 | 40.0 | 3.76e-01 | 72.0% | 56.8% |
| 3615945 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.56 | 39.0 | 3.65e-01 | 73.3% | 61.7% |
| 1279059 | 2003.1.5.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ | 0.56 | 47.0 | 3.52e-01 | 98.7% | 39.4% |
| 3632109 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 39.0 | 3.42e-01 | 72.0% | 49.1% |
| 4632598 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.55 | 41.0 | 3.55e-01 | 80.0% | 68.3% |
| 3499425 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.55 | 38.0 | 3.40e-01 | 72.0% | 64.2% |
| 3395353 | 11.1.1.1154 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF29963 | 0.54 | 37.0 | 3.37e-01 | 72.0% | 58.1% |
| 4228321 | 304.113.1.0 ↗ | a+b two layers › Alpha-beta plaits › Alpha subunit of glutamate synthase, insertion domain › Alpha subunit of glutamate synthase, insertion domain | 0.53 | 37.0 | 3.48e-01 | 73.3% | 57.9% |
| 5016760 | 304.48.1.32 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › TiaS-FLD | 0.52 | 37.0 | 2.93e-01 | 74.7% | 53.8% |
| 3979683 | 886.1.1.2 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › GyrI-like | 0.52 | 43.0 | 3.52e-01 | 98.7% | 86.9% |
| 3778612 | 304.18.1.1 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB | 0.51 | 35.0 | 3.30e-01 | 73.3% | 57.0% |
| 3339376 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 35.0 | 3.11e-01 | 72.0% | 93.9% |
| 3744288 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.51 | 43.0 | 3.80e-01 | 98.7% | 78.3% |
| 5047554 | 241.1.1.5 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2299 | 0.51 | 40.0 | 3.28e-01 | 88.0% | 82.0% |
| 3999103 | 11.1.1.796 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_Shg | 0.50 | 42.0 | 3.48e-01 | 100.0% | 92.3% |
| 3384692 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.50 | 34.0 | 3.18e-01 | 70.7% | 64.0% |
| 5014488 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.50 | 36.0 | 3.10e-01 | 78.7% | 87.4% |