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IMGVR_UViG_3300025730_000892-3300025730-Ga0209606_10116453
Arc-VirIMGVR_UViG_3300025730_000892-3300025730-Ga0209606_10116453
Identity
- Kingdom:
- archaea
Quality
86.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-128
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fexA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.55 | 43.0 | 3.85e-01 | 84.4% | 94.7% |
| 2gwcA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.53 | 45.0 | 3.12e-01 | 91.4% | 89.7% |
| 2rghA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 35.0 | 2.87e-01 | 70.3% | 90.4% |
| 3efeC00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.52 | 46.0 | 3.96e-01 | 99.2% | 97.6% |
| 5d0yA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.51 | 36.0 | 3.38e-01 | 70.3% | 89.7% |
| 3f5dA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 45.0 | 3.94e-01 | 97.7% | 97.4% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927951 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.81 | 76.0 | 6.49e-01 | 100.0% | 71.8% |
| 3679089 | 2498.1.1.51 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DA1-like | 0.78 | 73.0 | 5.66e-01 | 100.0% | 59.7% |
| 3676009 | 2498.1.1.51 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › DA1-like | 0.77 | 72.0 | 6.34e-01 | 100.0% | 94.5% |
| 4943608 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.77 | 72.0 | 5.69e-01 | 100.0% | 62.0% |
| 5051737 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.68 | 62.0 | 5.30e-01 | 100.0% | 88.3% |
| 3526713 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.66 | 56.0 | 5.17e-01 | 91.4% | 98.8% |
| 5077564 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.66 | 59.0 | 4.58e-01 | 98.4% | 90.9% |
| 3589463 | 2498.1.1.29 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M78 | 0.65 | 59.0 | 5.54e-01 | 98.4% | 83.9% |
| 4928093 | 2498.1.1.17 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YgjP-like | 0.62 | 43.0 | 4.61e-01 | 85.9% | 81.8% |
| 3823610 | 101.1.10.36 ↗ | alpha arrays › HTH › HTH › Cyclin-like › MOM1 | 0.55 | 34.0 | 3.58e-01 | 96.9% | 67.5% |
| 348715 | 2007.1.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DJ-1_PfpI | 0.51 | 46.0 | 3.90e-01 | 99.2% | 95.3% |
| 3590104 | 2007.1.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › DJ-1_PfpI | 0.51 | 44.0 | 3.90e-01 | 97.7% | 97.9% |
| 3613305 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.51 | 36.0 | 2.90e-01 | 75.0% | 93.0% |
D2
medium
residues 129-200
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ufeA02 | 1.20.58.1950 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 37.0 | 4.19e-01 | 77.8% | 100.0% |
| 1vs5O00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.54 | 37.0 | 3.55e-01 | 73.6% | 72.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4244661 | 152.1.2.1 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 | 0.61 | 38.0 | 4.08e-01 | 70.8% | 75.0% |
| 3785416 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.56 | 41.0 | 2.96e-01 | 76.4% | 70.0% |